FN4314-S Chr1 11769545 11769545 0 0 Insertion 61 HET FN4314-S Chr1 15151650 C-T 0 0 Single Base Substitution 0 Homo FN4314-S Chr1 16391767 T-C 0 0 Single Base Substitution 0 Homo FN4314-S Chr1 17593292 17782647 0 0 Inversion 0 FN4314-S Chr1 17929755 18116327 0 0 Inversion 0 FN4314-S Chr1 28445869 A-G 0 0 Single Base Substitution 0 HET FN4314-S Chr10 10311897 Chr4 5525974 0 Translocation 0 FN4314-S Chr10 22929933 22929934 0 0 Deletion 1 HET FN4314-S Chr10 3774666 C-G 0 0 Single Base Substitution 0 SPLICE_SITE_ACCEPTOR HET LOC_Os10g07190 retrotransposon protein, putative, unclassified, expressed FN4314-S Chr10 4940623 T-G 0 0 Single Base Substitution 0 HET FN4314-S Chr11 10374206 10374211 0 0 Deletion 5 HET FN4314-S Chr11 13614985 G-A 0 0 Single Base Substitution 0 HET FN4314-S Chr11 14830357 T-A 0 0 Single Base Substitution 0 HET FN4314-S Chr11 15306146 T-A 0 0 Single Base Substitution 0 HET FN4314-S Chr11 16099537 T-A 0 0 Single Base Substitution 0 HET FN4314-S Chr11 16844691 C-G 0 0 Single Base Substitution 0 HET FN4314-S Chr11 16844695 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g29074 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4314-S Chr11 18308011 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g31370 hypothetical protein FN4314-S Chr11 23873974 23873976 0 0 Deletion 2 HET FN4314-S Chr11 27482145 27482149 0 0 Deletion 4 HET FN4314-S Chr12 20096547 Chr6 23394909 0 Translocation 0 FN4314-S Chr12 20296018 20296069 0 0 Deletion 51 HET FN4314-S Chr12 22965792 22965796 0 0 Deletion 4 HET FN4314-S Chr12 8225692 Chr4 2101346 0 Translocation 0 FN4314-S Chr2 20859222 20859223 0 0 Deletion 1 frameshift_variant HET LOC_Os02g34790 receptor-like protein kinase 5 precursor, putative, expressed FN4314-S Chr2 23010572 23010572 0 0 Insertion 2 HET FN4314-S Chr2 23634852 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g39130 transposon protein, putative, Pong sub-class, expressed FN4314-S Chr2 27021959 A-T 0 0 Single Base Substitution 0 Homo FN4314-S Chr2 28102564 G-A 0 0 Single Base Substitution 0 HET FN4314-S Chr2 29436800 G-A 0 0 Single Base Substitution 0 HET FN4314-S Chr2 31285544 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g51130 glycosyl transferase 8 domain containing protein, putative, expressed FN4314-S Chr2 31525235 C-T 0 0 Single Base Substitution 0 HET FN4314-S Chr2 33836557 33836560 0 0 Deletion 3 HET FN4314-S Chr3 19014167 A-G 0 0 Single Base Substitution 0 HET FN4314-S Chr3 26538240 26593953 0 0 Inversion 0 FN4314-S Chr3 26538257 26593956 0 0 Inversion 0 FN4314-S Chr3 26936494 26936502 0 0 Deletion 8 frameshift_variant HET LOC_Os03g47590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4314-S Chr3 5950634 G-A 0 0 Single Base Substitution 0 HET FN4314-S Chr3 7249075 7249080 0 0 Deletion 5 Homo FN4314-S Chr3 8082029 T-A 0 0 Single Base Substitution 0 HET FN4314-S Chr4 16756460 C-G 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g28300 Rf1, mitochondrial precursor, putative, expressed FN4314-S Chr4 19068792 19068792 0 0 Insertion 1 frameshift_variant HET LOC_Os04g31850 retrotransposon protein, putative, unclassified, expressed FN4314-S Chr4 26561864 T-A 0 0 Single Base Substitution 0 HET FN4314-S Chr4 28134601 A-T 0 0 Single Base Substitution 0 HET FN4314-S Chr4 5236099 G-A 0 0 Single Base Substitution 0 Homo FN4314-S Chr4 8637255 8637275 0 0 Deletion 20 Homo FN4314-S Chr5 28456940 Chr4 28832653 0 Translocation 0 LOC_Os05g49600 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4314-S Chr5 28457379 Chr4 28748158 0 Translocation 0 LOC_Os05g49600 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4314-S Chr6 16047137 16047137 0 0 Insertion 282 HET FN4314-S Chr6 20542814 C-T 0 0 Single Base Substitution 0 HET FN4314-S Chr7 16344697 T-A 0 0 Single Base Substitution 0 HET FN4314-S Chr7 16344701 A-G 0 0 Single Base Substitution 0 HET FN4314-S Chr7 23384307 A-G 0 0 Single Base Substitution 0 HET FN4314-S Chr7 26079731 G-A 0 0 Single Base Substitution 0 HET FN4314-S Chr7 7500286 7500287 0 0 Deletion 1 frameshift_variant HET LOC_Os07g13090 expressed protein FN4314-S Chr8 11180215 C-A 0 0 Single Base Substitution 0 HET FN4314-S Chr8 13631941 13631946 0 0 Deletion 5 Homo FN4314-S Chr8 16899200 16899200 0 0 Insertion 6 HET FN4314-S Chr8 22283208 G-A 0 0 Single Base Substitution 0 Homo FN4314-S Chr8 25565835 25565838 0 0 Deletion 3 HET FN4314-S Chr8 6311047 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g10710 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4314-S Chr8 9383727 9383740 0 0 Deletion 13 frameshift_variant Homo LOC_Os08g15420 CSLC3 - cellulose synthase-like family C, expressed FN4314-S Chr9 12548864 Chr7 23798420 0 Translocation 0 LOC_Os07g39710 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed FN4314-S Chr9 12548864 Chr7 23798420 0 Translocation 0 LOC_Os09g20830 heat shock factor-binding protein 1, putative, expressed FN4314-S Chr9 12582336 Chr7 23798389 0 Translocation 0 LOC_Os07g39710 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed FN4314-S Chr9 12582336 Chr7 23798389 0 Translocation 0 LOC_Os09g20900 hypoxia-responsive family protein, putative, expressed FN4314-S Chr9 12835928 A-T 0 0 Single Base Substitution 0 HET FN4314-S Chr9 9654463 9654472 0 0 Deletion 9 HET