FN4379-S Chr1 11862109 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr1 14990110 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr1 21207741 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g37880 transposon protein, putative, unclassified, expressed FN4379-S Chr1 21772356 21772374 0 0 Deletion 18 HOMO FN4379-S Chr1 23833475 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4379-S Chr1 24352377 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN4379-S Chr1 24412430 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4379-S Chr1 25107775 25107787 0 0 Deletion 12 HOMO LOC_Os01g43820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4379-S Chr1 29838641 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr1 3426376 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g07260 expressed protein FN4379-S Chr1 36792087 36792087 0 0 Insertion 1 HET FN4379-S Chr1 43041063 43041063 0 0 Insertion 1 HET FN4379-S Chr1 4846801 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr10 12375549 12375550 0 0 Deletion 1 HOMO FN4379-S Chr10 16439459 16439462 0 0 Deletion 3 HOMO FN4379-S Chr10 17662621 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr10 7998568 7998581 0 0 Deletion 13 HOMO FN4379-S Chr11 1416890 1416891 0 0 Deletion 1 HOMO LOC_Os11g03650 mla1, putative, expressed FN4379-S Chr11 16809509 16809572 0 0 Deletion 63 HOMO FN4379-S Chr11 1763443 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4379-S Chr11 23074103 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr11 2521446 2521446 0 0 Insertion 1 HOMO FN4379-S Chr11 6046287 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4379-S Chr11 6448380 6448385 0 0 Deletion 5 HOMO LOC_Os11g11580 NB-ARC domain containing protein, expressed FN4379-S Chr12 11124669 11124669 0 0 Insertion 2 HOMO FN4379-S Chr12 16716741 16717928 0 0 Inversion 1188 HET FN4379-S Chr12 18162288 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4379-S Chr12 20195838 Chr4 56438 0 Translocation 0 HET LOC_Os04g33350 expressed protein FN4379-S Chr12 5338854 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr12 8917839 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr12 9783419 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4379-S Chr2 12328103 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr2 13410177 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32690 pleiotropic drug resistance protein 15, putative, expressed FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32700 autophagy-related protein, putative, expressed FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32710 expressed protein FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32720 hypothetical protein FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32730 neutral/alkaline invertase, putative, expressed FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32740 SNARE domain containing protein, putative, expressed FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32750 glycosyltransferase, putative, expressed FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32760 60S acidic ribosomal protein, putative, expressed FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32770 cytochrome P450, putative, expressed FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32780 pentatricopeptide, putative, expressed FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32790 hypothetical protein FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32814 heavy metal-associated domain containing protein, expressed FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32840 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32850 expressed protein FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32860 poly synthetase 3, putative, expressed FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32870 retrotransposon protein, putative, unclassified, expressed FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32880 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32890 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32900 expressed protein FN4379-S Chr2 19417001 19545000 0 0 Deletion 128000 HET LOC_Os02g32910 retrotransposon protein, putative, unclassified, expressed FN4379-S Chr2 19805341 19805342 0 0 Deletion 1 HOMO FN4379-S Chr2 20495132 20495280 0 0 Inversion 149 HET FN4379-S Chr2 26347220 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr2 26688620 26688623 0 0 Deletion 3 HOMO FN4379-S Chr2 30593675 30593678 0 0 Deletion 3 HOMO LOC_Os02g50100 SET domain-containing protein, putative, expressed FN4379-S Chr2 31372794 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4379-S Chr2 4720299 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN4379-S Chr2 7604950 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4379-S Chr2 8902905 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4379-S Chr2 9009054 9009054 0 0 Insertion 9 HET FN4379-S Chr2 9088885 9088885 0 0 Insertion 57 HET FN4379-S Chr3 14314848 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr3 15951803 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr3 26668096 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr3 28775949 T-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4379-S Chr3 30498187 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4379-S Chr3 32408946 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4379-S Chr3 433511 433518 0 0 Deletion 7 HOMO FN4379-S Chr3 7770670 7770671 0 0 Deletion 1 HOMO FN4379-S Chr3 8021101 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g14750 retrotransposon protein, putative, unclassified, expressed FN4379-S Chr4 20402091 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g33690 sec23/Sec24 trunk domain containing protein, expressed FN4379-S Chr4 22769122 22769344 0 0 Inversion 223 HET FN4379-S Chr4 28116137 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g47370 coiled-coil domain-containing protein 124, putative, expressed FN4379-S Chr4 28508550 28508555 0 0 Deletion 5 HOMO FN4379-S Chr4 29306181 29306197 0 0 Deletion 16 HOMO FN4379-S Chr4 5271514 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr4 8223179 C-T 0 0 Single Base Substitution 0 INTRON HET FN4379-S Chr4 855526 855530 0 0 Deletion 4 HOMO FN4379-S Chr5 11561823 T-G 0 0 Single Base Substitution 0 INTRON HOMO FN4379-S Chr5 19008640 19008640 0 0 Insertion 51 HET FN4379-S Chr5 20051591 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr5 22158567 C-G 0 0 Single Base Substitution 0 INTRON HET FN4379-S Chr5 27110779 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr5 27807540 Chr2 3567833 0 Translocation 0 HOMO LOC_Os02g45710 zinc finger, C3HC4 type domain containing protein, expressed FN4379-S Chr5 27807540 Chr2 3567833 0 Translocation 0 HOMO LOC_Os05g48520 glyoxal oxidase-related, putative, expressed FN4379-S Chr5 27807546 Chr2 3568296 0 Translocation 0 HOMO LOC_Os02g45710 zinc finger, C3HC4 type domain containing protein, expressed FN4379-S Chr5 27807546 Chr2 3568296 0 Translocation 0 HOMO LOC_Os05g48520 glyoxal oxidase-related, putative, expressed FN4379-S Chr5 27829995 27829997 0 0 Deletion 2 HOMO FN4379-S Chr5 28923206 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr6 14715096 14715097 0 0 Deletion 1 HOMO FN4379-S Chr6 16307934 16307942 0 0 Deletion 8 HOMO FN4379-S Chr6 29189209 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os06g48270 expressed protein FN4379-S Chr6 6889995 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr7 10398922 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g17610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4379-S Chr7 1141870 A-T 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN4379-S Chr7 13197430 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4379-S Chr7 13197440 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4379-S Chr7 13197441 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4379-S Chr7 22054665 22054667 0 0 Deletion 2 HOMO FN4379-S Chr7 24153758 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr7 27522268 27522270 0 0 Deletion 2 HOMO FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g01990 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02000 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02030 thiamine pyrophosphate enzyme, N-terminal TPP binding domain containing protein, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02040 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02050 retrotransposon protein, putative, Ty3-gypsy subclass FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02060 WRKY29, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02070 retrotransposon protein, putative, Ty3-gypsy subclass FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02080 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02090 Ser/Thr protein phosphatase family protein, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02100 flavin-containing monooxygenase family protein, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02110 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02120 flavin-containing monooxygenase family protein, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02130 flavin-containing monooxygenase family protein, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02140 flavin-containing monooxygenase family protein, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02150 3-5 exonuclease domain-containing protein, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02170 3-5 exonuclease domain-containing protein, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02180 3-5 exonuclease domain-containing protein, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02192 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02200 plastocyanin-like domain containing protein, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02210 eukaryotic translation initiation factor 5A, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02230 retrotransposon protein, putative, unclassified, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02240 transcription factor X1, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02250 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02260 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02270 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02280 pentatricopeptide, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02290 OsFBX208 - F-box domain containing protein, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02300 tetratricopeptide repeat domain containing protein, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02330 protein phosphatase 2C, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02340 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02350 casein kinase II subunit alpha-2, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02360 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02370 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02380 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02390 hypothetical protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02400 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02410 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02420 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02430 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02440 peroxidase precursor, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02450 receptor-like protein kinase 2 precursor, putative, expressed FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02460 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02470 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02480 expressed protein FN4379-S Chr7 596001 872000 0 0 Deletion 276000 HET LOC_Os07g02490 retrotransposon protein, putative, unclassified, expressed FN4379-S Chr7 7387389 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4379-S Chr7 8388856 8388858 0 0 Deletion 2 HOMO FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02520 expressed protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02530 hypothetical protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02540 HLS, putative, expressed FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02550 expressed protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02560 NB-ARC domain containing protein, expressed FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02570 NB-ARC domain containing protein, expressed FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02580 ubiquinone oxidoreductase, putative, expressed FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02590 expressed protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02600 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02610 expressed protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02620 NB-ARC domain containing protein, expressed FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02624 expressed protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02630 expressed protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02640 expressed protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02650 retrotransposon protein, putative, unclassified, expressed FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02660 expressed protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02674 expressed protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02690 DUF538 domain containing protein, putative, expressed FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02700 DUF538 domain containing protein, putative, expressed FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02710 expressed protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02720 expressed protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02730 expressed protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02740 hypothetical protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02750 transposon protein, putative, CACTA, En/Spm sub-class FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02760 OsFBD13 - F-box and FBD domain containing protein, expressed FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02770 OsFBL32 - F-box domain and LRR containing protein, expressed FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02780 STE_MEKK_ste11_MAP3K.20 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02790 expressed protein FN4379-S Chr7 894001 1047000 0 0 Deletion 153000 HET LOC_Os07g02800 MYB family transcription factor, putative, expressed FN4379-S Chr8 14225801 14225816 0 0 Deletion 15 HOMO LOC_Os08g23500 retrotransposon protein, putative, unclassified FN4379-S Chr8 15100577 15100578 0 0 Deletion 1 HOMO FN4379-S Chr8 18763625 18763625 0 0 Insertion 4 HET FN4379-S Chr8 18790535 18790535 0 0 Insertion 1 HET FN4379-S Chr8 2519702 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr8 5952460 5952461 0 0 Deletion 1 HOMO FN4379-S Chr9 13071766 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4379-S Chr9 14863567 15595915 0 0 Inversion 732349 HET FN4379-S Chr9 1620993 1620999 0 0 Deletion 6 HOMO FN4379-S Chr9 1935951 1935952 0 0 Deletion 1 HOMO FN4379-S Chr9 21597357 A-G 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN4379-S Chr9 9895083 9895086 0 0 Deletion 3 HOMO