FN4385-S Chr1 12434839 12434839 0 0 Insertion 2 HET FN4385-S Chr1 12479643 12479643 0 0 Insertion 2 HET FN4385-S Chr1 20070469 20070482 0 0 Deletion 13 HOMO LOC_Os01g36250 transposon protein, putative, unclassified, expressed FN4385-S Chr1 20426216 20426217 0 0 Deletion 1 HOMO FN4385-S Chr1 28505451 28505451 0 0 Insertion 2 HET FN4385-S Chr1 34172818 34172819 0 0 Deletion 1 HOMO FN4385-S Chr1 35696825 35696825 0 0 Insertion 1 HET FN4385-S Chr1 36846273 36846344 0 0 Deletion 71 HOMO FN4385-S Chr1 40081118 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g68990 retrotransposon, putative, centromere-specific, expressed FN4385-S Chr1 6653088 6653088 0 0 Insertion 1 HET FN4385-S Chr10 15066809 15066809 0 0 Insertion 1 HET FN4385-S Chr10 17448193 17448194 0 0 Deletion 1 HOMO FN4385-S Chr10 20502381 20502381 0 0 Insertion 2 HET FN4385-S Chr10 21685681 21685681 0 0 Insertion 2 HET FN4385-S Chr10 5411261 5411261 0 0 Insertion 1 HET FN4385-S Chr10 7072025 7072025 0 0 Insertion 1 HET FN4385-S Chr10 7454115 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4385-S Chr10 7454116 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4385-S Chr10 7673834 7673835 0 0 Deletion 1 HOMO FN4385-S Chr10 886537 G-A 0 0 Single Base Substitution 0 INTRON HET FN4385-S Chr11 15924884 15924888 0 0 Deletion 4 HOMO FN4385-S Chr11 16629562 16629563 0 0 Deletion 1 HOMO FN4385-S Chr11 18839990 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4385-S Chr11 26542450 26542451 0 0 Deletion 1 HOMO FN4385-S Chr11 4490351 T-G 0 0 Single Base Substitution 0 INTRON HET FN4385-S Chr11 5292125 5292125 0 0 Insertion 2 HET FN4385-S Chr11 8452393 8452393 0 0 Insertion 1 HET FN4385-S Chr12 11626172 11626172 0 0 Insertion 7 HET FN4385-S Chr12 15683807 15683808 0 0 Deletion 1 HOMO FN4385-S Chr12 15945634 15945634 0 0 Insertion 1 HET FN4385-S Chr12 16030037 16030037 0 0 Insertion 19 HET FN4385-S Chr12 17220852 17220901 0 0 Deletion 49 HOMO LOC_Os12g29070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4385-S Chr12 20449638 20449639 0 0 Deletion 1 HOMO FN4385-S Chr12 20726635 20726655 0 0 Deletion 20 HOMO FN4385-S Chr12 21379526 21379526 0 0 Insertion 1 HET FN4385-S Chr12 7770793 7770793 0 0 Insertion 5 HET FN4385-S Chr12 7952340 7952340 0 0 Insertion 1 HET FN4385-S Chr12 8513043 8513048 0 0 Deletion 5 HOMO FN4385-S Chr2 10952436 10952444 0 0 Deletion 8 HOMO FN4385-S Chr2 13962066 13962067 0 0 Deletion 1 HOMO FN4385-S Chr2 20174360 20174361 0 0 Deletion 1 HOMO FN4385-S Chr2 20440560 20440560 0 0 Insertion 2 HET FN4385-S Chr2 2048721 2048722 0 0 Deletion 1 HOMO FN4385-S Chr2 24446129 24446218 0 0 Deletion 89 HOMO LOC_Os02g40360 retrotransposon protein, putative, unclassified, expressed FN4385-S Chr2 34091096 34091097 0 0 Deletion 1 HOMO FN4385-S Chr2 34172624 Chr1 31363327 0 Translocation 0 HET FN4385-S Chr2 3479162 3479162 0 0 Insertion 1 HET FN4385-S Chr2 4362087 4362087 0 0 Insertion 3 HET FN4385-S Chr2 7112434 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4385-S Chr2 9093510 9093511 0 0 Deletion 1 HOMO FN4385-S Chr2 9121014 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4385-S Chr3 10165793 10165793 0 0 Insertion 1 HET FN4385-S Chr3 19267594 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4385-S Chr3 22936506 22936507 0 0 Deletion 1 HOMO FN4385-S Chr3 2650912 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4385-S Chr3 28802408 28802408 0 0 Insertion 2 HET FN4385-S Chr3 30250293 30250293 0 0 Insertion 1 HET FN4385-S Chr3 32583603 32583603 0 0 Insertion 4 HET FN4385-S Chr3 6478535 6478536 0 0 Deletion 1 HOMO FN4385-S Chr3 8090849 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4385-S Chr3 873389 873389 0 0 Insertion 1 HET FN4385-S Chr3 9241677 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4385-S Chr4 10720330 10720331 0 0 Deletion 1 HOMO LOC_Os04g19270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4385-S Chr4 12032401 12032401 0 0 Insertion 1 HET FN4385-S Chr4 1543033 1543034 0 0 Deletion 1 HOMO FN4385-S Chr4 20895875 20895876 0 0 Deletion 1 HOMO FN4385-S Chr4 22188140 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4385-S Chr4 22706203 22706203 0 0 Insertion 3 HET FN4385-S Chr4 24176175 A-T 0 0 Single Base Substitution 0 INTRON HET FN4385-S Chr4 2627645 2627646 0 0 Deletion 1 HOMO FN4385-S Chr4 28786531 28786532 0 0 Deletion 1 HOMO FN4385-S Chr4 30038112 30038113 0 0 Deletion 1 HOMO FN4385-S Chr4 34710949 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4385-S Chr4 4953974 4953974 0 0 Insertion 1 HET FN4385-S Chr4 5057510 5057511 0 0 Deletion 1 HOMO FN4385-S Chr4 8749036 8749036 0 0 Insertion 1 HET FN4385-S Chr4 9181466 9181466 0 0 Insertion 2 HET FN4385-S Chr5 1234896 1235037 0 0 Inversion 142 HET FN4385-S Chr5 15188225 15188226 0 0 Deletion 1 HOMO FN4385-S Chr5 16756747 16756748 0 0 Deletion 1 HOMO FN4385-S Chr5 22567824 22567824 0 0 Insertion 1 HET FN4385-S Chr5 2697098 2697098 0 0 Insertion 2 HET FN4385-S Chr5 28689047 28689049 0 0 Deletion 2 HOMO FN4385-S Chr5 29275686 29275687 0 0 Deletion 1 HOMO FN4385-S Chr5 5301174 5301174 0 0 Insertion 1 HET FN4385-S Chr5 9940011 9940012 0 0 Deletion 1 HOMO FN4385-S Chr6 10353963 10353963 0 0 Insertion 1 HET FN4385-S Chr6 115342 115343 0 0 Deletion 1 HOMO FN4385-S Chr6 1302440 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4385-S Chr6 15437108 15437262 0 0 Deletion 154 HOMO FN4385-S Chr6 2403847 Chr1 25613435 0 Translocation 0 HET FN4385-S Chr6 25171714 25171714 0 0 Insertion 1 HET FN4385-S Chr6 29242595 29242596 0 0 Deletion 1 HOMO FN4385-S Chr6 6794507 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g12530 CS domain containing protein, putative, expressed FN4385-S Chr6 752451 Chr3 15249003 0 Translocation 0 HET LOC_Os03g02240 AT-GTL1, putative, expressed FN4385-S Chr6 8115518 8115519 0 0 Deletion 1 HOMO FN4385-S Chr6 9376695 9376696 0 0 Deletion 1 HOMO FN4385-S Chr7 10659682 10659713 0 0 Deletion 31 HOMO FN4385-S Chr7 12229819 12229820 0 0 Deletion 1 HOMO FN4385-S Chr7 13263218 13263219 0 0 Deletion 1 HOMO LOC_Os07g23480 retrotransposon protein, putative, unclassified, expressed FN4385-S Chr7 13468576 Chr2 24765616 0 Translocation 0 HET FN4385-S Chr7 1522237 1522237 0 0 Insertion 5 HET FN4385-S Chr7 15684385 15684386 0 0 Deletion 1 HOMO FN4385-S Chr7 21336915 21336915 0 0 Insertion 2 HET FN4385-S Chr7 21455810 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4385-S Chr7 21968187 21968279 0 0 Deletion 92 HOMO FN4385-S Chr7 26114640 26114708 0 0 Deletion 68 HOMO FN4385-S Chr7 27229894 27229896 0 0 Deletion 2 HOMO FN4385-S Chr7 27558942 27558942 0 0 Insertion 1 HET FN4385-S Chr7 4979728 G-A 0 0 Single Base Substitution 0 INTRON HET FN4385-S Chr7 5931784 5931784 0 0 Insertion 1 HET FN4385-S Chr7 7610786 7610789 0 0 Deletion 3 HOMO FN4385-S Chr7 9075758 9075760 0 0 Deletion 2 HOMO FN4385-S Chr7 9561171 9561172 0 0 Deletion 1 HOMO FN4385-S Chr8 12156104 12156105 0 0 Deletion 1 HOMO LOC_Os08g20250 retrotransposon protein, putative, unclassified, expressed FN4385-S Chr8 13728126 13728127 0 0 Deletion 1 HOMO FN4385-S Chr8 13806042 13806043 0 0 Deletion 1 HOMO FN4385-S Chr8 17916115 17916116 0 0 Deletion 1 HOMO FN4385-S Chr8 20002580 20002581 0 0 Deletion 1 HOMO FN4385-S Chr8 23122611 Chr2 35370970 0 Translocation 0 HET FN4385-S Chr8 7267630 7267630 0 0 Insertion 1 HET FN4385-S Chr8 810433 810434 0 0 Deletion 1 HOMO FN4385-S Chr9 12388593 12388802 0 0 Inversion 210 HET FN4385-S Chr9 13546853 13546853 0 0 Insertion 1 HET FN4385-S Chr9 18935128 18935129 0 0 Deletion 1 HOMO FN4385-S Chr9 19959254 19959255 0 0 Deletion 1 HOMO FN4385-S Chr9 3260785 3260785 0 0 Insertion 1 HET FN4385-S Chr9 5234340 5234340 0 0 Insertion 1 HET FN4385-S Chr9 5393001 5495000 0 0 Deletion 102000 HOMO LOC_Os09g09930 heavy metal transport/detoxification protein, putative, expressed FN4385-S Chr9 5393001 5495000 0 0 Deletion 102000 HOMO LOC_Os09g09940 hypothetical protein FN4385-S Chr9 5393001 5495000 0 0 Deletion 102000 HOMO LOC_Os09g09944 expressed protein FN4385-S Chr9 5393001 5495000 0 0 Deletion 102000 HOMO LOC_Os09g09960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4385-S Chr9 5393001 5495000 0 0 Deletion 102000 HOMO LOC_Os09g09970 retrotransposon protein, putative, unclassified, expressed FN4385-S Chr9 5393001 5495000 0 0 Deletion 102000 HOMO LOC_Os09g09980 glucan endo-1,3-beta-glucosidase precursor, putative, expressed FN4385-S Chr9 5393001 5495000 0 0 Deletion 102000 HOMO LOC_Os09g09990 transposon protein, putative, unclassified, expressed FN4385-S Chr9 5393001 5495000 0 0 Deletion 102000 HOMO LOC_Os09g10000 expressed protein FN4385-S Chr9 5393001 5495000 0 0 Deletion 102000 HOMO LOC_Os09g10010 expressed protein FN4385-S Chr9 5393001 5495000 0 0 Deletion 102000 HOMO LOC_Os09g10020 transposon protein, putative, unclassified, expressed FN4385-S Chr9 5393001 5495000 0 0 Deletion 102000 HOMO LOC_Os09g10030 retrotransposon protein, putative, unclassified, expressed FN4385-S Chr9 5393001 5495000 0 0 Deletion 102000 HOMO LOC_Os09g10054 disease resistance protein RPS2, putative, expressed FN4385-S Chr9 5393001 5495000 0 0 Deletion 102000 HOMO LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10090 retrotransposon protein, putative, unclassified FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10100 retrotransposon protein, putative, unclassified FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10109 retrotransposon protein, putative, Ty3-gypsy subclass FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10120 retrotransposon protein, putative, unclassified FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10130 retrotransposon protein, putative, Ty3-gypsy subclass FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10140 retrotransposon protein, putative, unclassified, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10149 retrotransposon protein, putative, Ty3-gypsy subclass FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10160 retrotransposon protein, putative, unclassified, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10180 expressed protein FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10190 transposon protein, putative, unclassified, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10200 Skp1 family, dimerisation domain containing protein, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10201 expressed protein FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10204 expressed protein FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10210 expressed protein FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10220 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10230 Skp1 family, dimerisation domain containing protein, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10240 retrotransposon protein, putative, unclassified, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10250 expressed protein FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10260 Skp1 family, dimerisation domain containing protein, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10270 SKP1-like protein 1B, putative, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10274 expressed protein FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10280 expressed protein FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10290 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10300 Skp1 family, dimerisation domain containing protein, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10310 retrotransposon protein, putative, Ty3-gypsy subclass FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10320 transposon protein, putative, unclassified, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10330 expressed protein FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10340 cytochrome P450, putative, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10350 transposon protein, putative, unclassified, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10360 expressed protein FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10370 hypothetical protein FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10380 transposon protein, putative, unclassified, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10390 retrotransposon protein, putative, unclassified, expressed FN4385-S Chr9 5497001 5689000 0 0 Deletion 192000 HOMO LOC_Os09g10400 transposon protein, putative, unclassified, expressed FN4385-S Chr9 5690001 5698000 0 0 Deletion 8000 HOMO LOC_Os09g10410 retrotransposon protein, putative, unclassified, expressed FN4385-S Chr9 5690001 5698000 0 0 Deletion 8000 HOMO LOC_Os09g10420 retrotransposon protein, putative, unclassified, expressed FN4385-S Chr9 5690001 5698000 0 0 Deletion 8000 HOMO LOC_Os09g10430 retrotransposon protein, putative, unclassified, expressed FN4385-S Chr9 7334089 7334089 0 0 Insertion 3 HET FN4385-S Chr9 7861671 7861689 0 0 Deletion 18 HOMO FN4385-S Chr9 8244705 8244705 0 0 Insertion 3 HET FN4385-S Chr9 9215152 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g15180 transposon protein, putative, unclassified, expressed