FN4388-S Chr1 12153220 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4388-S Chr1 17907722 17907723 0 0 Deletion 1 HOMO FN4388-S Chr1 19559640 19559641 0 0 Deletion 1 HOMO FN4388-S Chr1 24797929 24797930 0 0 Deletion 1 HOMO FN4388-S Chr1 27971063 27971066 0 0 Deletion 3 HOMO FN4388-S Chr1 29109254 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4388-S Chr1 31774864 32528723 0 0 Inversion 753860 HET FN4388-S Chr1 4878389 4878389 0 0 Insertion 1 HET FN4388-S Chr1 6284654 6284660 0 0 Deletion 6 HOMO FN4388-S Chr10 10274083 10274084 0 0 Deletion 1 HOMO LOC_Os10g20430 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4388-S Chr10 11399655 Chr1 16252173 0 Translocation 0 HET FN4388-S Chr10 14788850 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr10 15179631 15179632 0 0 Deletion 1 HOMO FN4388-S Chr10 22905633 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr10 4892035 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr10 5305299 5305300 0 0 Deletion 1 HOMO LOC_Os10g09810 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr10 6988136 6988137 0 0 Deletion 1 HOMO FN4388-S Chr10 7002164 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g12570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4388-S Chr10 8744076 8744076 0 0 Insertion 1 HET FN4388-S Chr11 12101869 12101869 0 0 Insertion 53 HET FN4388-S Chr11 15529924 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr11 15828353 15828388 0 0 Deletion 35 HOMO FN4388-S Chr11 18956119 18956120 0 0 Deletion 1 HOMO FN4388-S Chr11 20536632 T-C 0 0 Single Base Substitution 0 INTRON HET FN4388-S Chr11 2151000 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr11 9054147 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr12 10312879 10312879 0 0 Insertion 1 HET FN4388-S Chr12 10666628 10666629 0 0 Deletion 1 HOMO FN4388-S Chr12 1115854 1115855 0 0 Deletion 1 HOMO FN4388-S Chr12 12946631 12946631 0 0 Insertion 1 HET FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03440 OsFBX436 - F-box domain containing protein, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03450 expressed protein FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03470 alpha-N-arabinofuranosidase A, putative, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03480 alpha-N-arabinofuranosidase, putative, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03490 expressed protein FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03500 expressed protein FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03510 PME/invertase inhibitor, putative, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03520 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03530 alpha-N-arabinofuranosidase, putative, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03540 WD domain, G-beta repeat domain containing protein, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03554 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03580 expressed protein FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03594 OsFBX437 - F-box domain containing protein, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03601 expressed protein FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03610 expressed protein FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03630 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03640 S-locus-like receptor protein kinase, putative, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03650 D-mannose binding lectin family protein, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03660 transposon protein, putative, unclassified FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03670 D-mannose binding lectin family protein, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03690 D-mannose binding lectin family protein, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03700 expressed protein FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03710 RNA recognition motif containing protein, putative, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03720 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03730 zinc finger DHHC domain-containing protein, putative, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03740 OsFBX438 - F-box domain containing protein, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03750 Leucine Rich Repeat family protein, expressed FN4388-S Chr12 1343001 1533000 0 0 Deletion 190000 HET LOC_Os12g03760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4388-S Chr12 17187849 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr12 18244214 18244214 0 0 Insertion 1 HET LOC_Os12g30400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4388-S Chr12 19943028 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr12 2366154 2366154 0 0 Insertion 4 HET FN4388-S Chr12 2880758 2880758 0 0 Insertion 1 HET FN4388-S Chr12 327001 384000 0 0 Deletion 57000 HET LOC_Os12g01540 expressed protein FN4388-S Chr12 327001 384000 0 0 Deletion 57000 HET LOC_Os12g01550 DUF260 domain containing protein, putative, expressed FN4388-S Chr12 327001 384000 0 0 Deletion 57000 HET LOC_Os12g01560 PMR5, putative, expressed FN4388-S Chr12 327001 384000 0 0 Deletion 57000 HET LOC_Os12g01570 nodulin, putative, expressed FN4388-S Chr12 327001 384000 0 0 Deletion 57000 HET LOC_Os12g01574 expressed protein FN4388-S Chr12 327001 384000 0 0 Deletion 57000 HET LOC_Os12g01580 MATE efflux protein, putative, expressed FN4388-S Chr12 327001 384000 0 0 Deletion 57000 HET LOC_Os12g01590 expressed protein FN4388-S Chr12 327001 384000 0 0 Deletion 57000 HET LOC_Os12g01600 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr12 327001 384000 0 0 Deletion 57000 HET LOC_Os12g01610 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr12 327001 384000 0 0 Deletion 57000 HET LOC_Os12g01620 expressed protein FN4388-S Chr12 327001 384000 0 0 Deletion 57000 HET LOC_Os12g01630 expressed protein FN4388-S Chr12 327001 384000 0 0 Deletion 57000 HET LOC_Os12g01640 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01750 zinc finger, C3HC4 type domain containing protein, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01760 F-box/LRR domain containing protein, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01770 protein phosphatase 2c, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01780 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01790 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01800 DNA cytosine methyltransferase Zmet3, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01810 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01820 ATCHX, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01830 staphylococcal nuclease homologue, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01850 pentatricopeptide, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01860 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01870 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01880 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01890 SAG20, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01900 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01910 pentatricopeptide, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01916 double-stranded RNA binding motif containing protein, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01922 WD domain and HEAT domain containing protein, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01930 lipase-related, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01940 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01950 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01955 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01960 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01970 F-box family protein, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01980 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g01990 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02000 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02010 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02020 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02030 BTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02040 hypoxia-responsive family protein, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02050 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02060 peroxidase precursor, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02070 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02080 peroxidase precursor, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02090 TCP family transcription factor, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02094 saposin-like type B, region 1 family protein, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02100 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02105 LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02120 dual specificity protein phosphatase, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02130 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02140 hypothetical protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02150 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02160 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02170 retrotransposon protein, putative, SINE subclass, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02180 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02200 CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02210 RING finger protein, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02220 zinc finger, C3HC4 type domain containing protein, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02230 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02240 expressed protein FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02250 STE_PAK_Ste20_Slob_Wnk.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02260 nucleotidyltransferase, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02270 transposon protein, putative, unclassified, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02280 pentatricopeptide, putative, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02290 LTPL23 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02300 LTPL26 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02310 LTPL11 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02320 LTPL12 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN4388-S Chr12 455001 752000 0 0 Deletion 297000 HET LOC_Os12g02330 LTPL13 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN4388-S Chr12 696920 696920 0 0 Insertion 1 HET FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02340 LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02350 RING-H2 finger protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02370 chalcone--flavonone isomerase, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02380 elongation factor P, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02385 outer membrane protein, OMP85 family, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02390 vacuolar-sorting receptor precursor, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02400 WRKY114, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02410 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02420 WRKY97, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02430 MYB protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02440 WRKY95, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02450 WRKY64, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02460 transposon protein, putative, unclassified, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02470 WRKY65, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02490 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02500 esterase, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02510 esterase, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02520 OsMan09 - Endo-Beta-Mannanase, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02530 BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02540 BTBN23 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02550 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02560 hypothetical protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02570 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02589 hydrolase, alpha/beta fold family protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02610 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02620 zinc finger, C3HC4 type domain containing protein, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02630 cytochrome P450 72A1, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02640 cytochrome P450 72A1, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02660 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02670 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02680 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02690 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02700 harpin-induced protein 1 domain containing protein, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02710 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02720 DUF567 domain containing protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02730 histidine triad family protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02750 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02760 DUF567 domain containing protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02770 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02780 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02790 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02800 CRP11 - Cysteine-rich family protein precursor, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02810 protein kinase domain containing protein, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02814 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02820 cytidylyltransferase domain containing protein, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02830 SNF7 domain containing protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02840 ATCHX, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02850 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02860 retrotransposon protein, putative, unclassified FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02870 GRAS family transcription factor domain containing protein, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02880 E2F-related protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02890 retrotransposon protein, putative, SINE subclass, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02900 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02910 glycosyl transferase, family 8, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02920 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02930 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02940 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02950 EMB2748, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02960 glutathione S-transferase, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02970 RNA binding protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g02980 nucleoside-triphosphatase, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03000 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03010 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03020 transposon protein, putative, CACTA, En/Spm sub-class FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03030 conserved hypothetical protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03040 no apical meristem protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03050 no apical meristem protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03060 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03070 FHA domain containing protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03080 rp3 protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03090 ribosomal protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03094 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03100 exostosin family domain containing protein, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03110 ZF-HD protein dimerisation region containing protein, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03120 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03130 CDC45A - Putative DNA replication initiation protein, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03140 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03150 myb-like DNA-binding domain containing protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03160 transposon protein, putative, unclassified, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03170 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03180 Mad3/BUB1 homology region 1 domain containing protein, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03190 bifunctional aspartokinase/homoserine dehydrogenase, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03200 MATE efflux family protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03210 transposon protein, putative, Mariner sub-class, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03220 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03230 MATE efflux family protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03240 MATE efflux family protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03250 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03260 MATE efflux family protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03270 ELMO/CED-12 family protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03290 AP2 domain containing protein, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03304 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03320 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03330 hypothetical protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03340 protein of unknown function, DUF618 domain containing protein, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03350 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03360 EMB1379, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03370 harpin-induced protein 1 domain containing protein, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03380 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03390 OsFBX435 - F-box domain containing protein, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03400 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03410 expressed protein FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03420 VQ domain containing protein, putative, expressed FN4388-S Chr12 754001 1341000 0 0 Deletion 587000 HET LOC_Os12g03430 Mpv17 / PMP22 family domain containing protein, expressed FN4388-S Chr12 8264472 8264472 0 0 Insertion 3 HET FN4388-S Chr2 15183357 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr2 21354267 21354267 0 0 Insertion 36 HET LOC_Os02g35520 retrotransposon protein, putative, unclassified FN4388-S Chr2 4029380 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4388-S Chr3 19760188 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr3 2106762 2106763 0 0 Deletion 1 HOMO FN4388-S Chr3 22624599 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN4388-S Chr3 27795430 27795529 0 0 Deletion 99 HOMO FN4388-S Chr3 4962666 4962668 0 0 Deletion 2 HOMO FN4388-S Chr4 10059423 10059423 0 0 Insertion 1 HET FN4388-S Chr4 1159447 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4388-S Chr4 12941660 12941661 0 0 Deletion 1 HOMO FN4388-S Chr4 13152160 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr4 13537384 13537384 0 0 Insertion 1 HET FN4388-S Chr4 13641001 13716000 0 0 Deletion 75000 HET LOC_Os04g23890 AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed FN4388-S Chr4 13641001 13716000 0 0 Deletion 75000 HET LOC_Os04g23910 OsMADS25 - MADS-box family gene with MIKCc type-box, expressed FN4388-S Chr4 13641001 13716000 0 0 Deletion 75000 HET LOC_Os04g23920 retrotransposon protein, putative, unclassified FN4388-S Chr4 13641001 13716000 0 0 Deletion 75000 HET LOC_Os04g23930 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr4 13641001 13716000 0 0 Deletion 75000 HET LOC_Os04g23940 chalcone synthase, putative, expressed FN4388-S Chr4 13641001 13716000 0 0 Deletion 75000 HET LOC_Os04g23960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4388-S Chr4 13641001 13716000 0 0 Deletion 75000 HET LOC_Os04g23970 retrotransposon, putative, centromere-specific FN4388-S Chr4 13641001 13716000 0 0 Deletion 75000 HET LOC_Os04g23980 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr4 13641001 13716000 0 0 Deletion 75000 HET LOC_Os04g23990 retrotransposon, putative, centromere-specific, expressed FN4388-S Chr4 13926456 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr4 14126001 14140000 0 0 Deletion 14000 HET LOC_Os04g24590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4388-S Chr4 14126001 14140000 0 0 Deletion 14000 HET LOC_Os04g24600 cysteine proteinase 1 precursor, putative, expressed FN4388-S Chr4 14126001 14140000 0 0 Deletion 14000 HET LOC_Os04g24610 expressed protein FN4388-S Chr4 14126001 14140000 0 0 Deletion 14000 HET LOC_Os04g24620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4388-S Chr4 14191052 Chr1 30334974 0 Translocation 0 HET LOC_Os04g24730 transposon protein, putative, unclassified, expressed FN4388-S Chr4 15860660 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr4 16020667 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr4 1937797 1937798 0 0 Deletion 1 HOMO FN4388-S Chr4 2600052 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr4 26235505 26235505 0 0 Insertion 1 HET FN4388-S Chr4 32651657 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN4388-S Chr4 34462365 G-T 0 0 Single Base Substitution 0 INTRON HET FN4388-S Chr5 1982539 1982591 0 0 Deletion 52 HOMO FN4388-S Chr5 2017252 2017252 0 0 Insertion 1 HET FN4388-S Chr5 2352114 2352126 0 0 Deletion 12 HOMO LOC_Os05g04890 expressed protein FN4388-S Chr5 25142173 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr6 18388060 18388061 0 0 Deletion 1 HOMO FN4388-S Chr6 21593473 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr6 27133769 27133769 0 0 Insertion 3 HET FN4388-S Chr6 31218713 31218713 0 0 Insertion 1 HET FN4388-S Chr6 5269557 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr6 722231 1493162 0 0 Inversion 770932 HET LOC_Os06g03770 ABC transporter, ATP-binding protein, putative, expressed FN4388-S Chr6 805369 1493185 0 0 Inversion 687817 HET LOC_Os06g03770 ABC transporter, ATP-binding protein, putative, expressed FN4388-S Chr6 8491185 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr7 10775343 10775343 0 0 Insertion 3 HET FN4388-S Chr7 16690623 16690623 0 0 Insertion 1 HET FN4388-S Chr7 21319753 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g35610 kelch repeat-containing protein, putative, expressed FN4388-S Chr7 21652325 21652325 0 0 Insertion 1 HET FN4388-S Chr7 22449270 22449270 0 0 Insertion 3 HOMO FN4388-S Chr7 23208418 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr7 23255401 23255403 0 0 Deletion 2 HOMO FN4388-S Chr7 2575926 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4388-S Chr7 26760017 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr7 2984724 2984724 0 0 Insertion 1 HET FN4388-S Chr8 1177546 1177547 0 0 Deletion 1 HOMO FN4388-S Chr8 17973215 17973216 0 0 Deletion 1 HOMO LOC_Os08g29290 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4388-S Chr8 3658804 3658805 0 0 Deletion 1 HOMO FN4388-S Chr8 3832004 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr8 74828 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr8 8848460 8848460 0 0 Insertion 1 HET FN4388-S Chr8 9304202 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g15300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4388-S Chr9 10044313 Chr7 15104053 0 Translocation 0 HET LOC_Os09g16430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4388-S Chr9 13343111 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g22030 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr9 14037784 14037785 0 0 Deletion 1 HOMO FN4388-S Chr9 15451265 15451265 0 0 Insertion 1 HET FN4388-S Chr9 17760291 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN4388-S Chr9 2543663 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4388-S Chr9 4050758 4050758 0 0 Insertion 1 HOMO FN4388-S Chr9 6856390 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os09g12130 retrotransposon protein, putative, unclassified, expressed FN4388-S Chr9 7804136 7804137 0 0 Deletion 1 HOMO