FN4390-S Chr1 10660501 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr1 10726415 10726424 0 0 Deletion 9 HOMO FN4390-S Chr1 11381567 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr1 13562460 13562477 0 0 Deletion 17 HOMO FN4390-S Chr1 14301587 14301588 0 0 Deletion 1 HOMO FN4390-S Chr1 18242628 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g33136 retrotransposon protein, putative, unclassified, expressed FN4390-S Chr1 19250313 19250315 0 0 Deletion 2 HOMO FN4390-S Chr1 19300404 19300417 0 0 Deletion 13 HOMO LOC_Os01g34920 beta-galactosidase precursor, putative, expressed FN4390-S Chr1 2907830 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g06090 expressed protein FN4390-S Chr1 35078237 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4390-S Chr1 35337256 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4390-S Chr1 37117862 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr1 6497710 6497719 0 0 Deletion 9 HOMO FN4390-S Chr1 9152491 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr1 9621474 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4390-S Chr10 22011768 22011861 0 0 Deletion 93 HOMO FN4390-S Chr10 258234 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr10 3223216 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr10 4539739 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr10 5894510 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr10 5895473 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr10 8107293 8107458 0 0 Deletion 165 HOMO FN4390-S Chr11 14724206 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4390-S Chr11 21066953 21066961 0 0 Deletion 8 HOMO FN4390-S Chr11 26661453 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4390-S Chr11 26661968 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr11 26802247 26802248 0 0 Deletion 1 HOMO LOC_Os11g44340 calmodulin binding protein, putative, expressed FN4390-S Chr11 27611488 27611488 0 0 Insertion 1 HET FN4390-S Chr11 28878365 28878365 0 0 Insertion 58 HET FN4390-S Chr12 15277102 15277109 0 0 Deletion 7 HOMO FN4390-S Chr12 17446329 17446334 0 0 Deletion 5 HOMO FN4390-S Chr12 23695918 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr12 264216 T-A 0 0 Single Base Substitution 0 INTRON HET FN4390-S Chr12 264217 A-T 0 0 Single Base Substitution 0 INTRON HET FN4390-S Chr12 9229235 9229235 0 0 Insertion 1 HET FN4390-S Chr2 1372183 1372184 0 0 Deletion 1 HOMO LOC_Os02g03380 retrotransposon protein, putative, unclassified, expressed FN4390-S Chr2 1877804 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4390-S Chr2 23784126 23784126 0 0 Insertion 2 HET FN4390-S Chr2 378200 378201 0 0 Deletion 1 HOMO LOC_Os02g01679 retrotransposon protein, putative, Ty3-gypsy subclass FN4390-S Chr2 6944353 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr2 8224809 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr3 10050814 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4390-S Chr3 16903637 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4390-S Chr3 23758350 23758351 0 0 Deletion 1 HOMO FN4390-S Chr3 26132675 26132679 0 0 Deletion 4 HOMO LOC_Os03g46220 retrotransposon protein, putative, unclassified, expressed FN4390-S Chr3 29635122 29635159 0 0 Deletion 37 HOMO FN4390-S Chr4 177028 177029 0 0 Deletion 1 HOMO FN4390-S Chr4 19293177 19293177 0 0 Insertion 3 HOMO FN4390-S Chr4 23708642 23708642 0 0 Insertion 6 HOMO FN4390-S Chr4 3249864 3249906 0 0 Deletion 42 HOMO FN4390-S Chr4 7451230 G-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g13390 retrotransposon protein, putative, unclassified FN4390-S Chr4 9571002 9571003 0 0 Deletion 1 HOMO FN4390-S Chr4 971011 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr5 10486626 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g18230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4390-S Chr5 11201519 11201521 0 0 Deletion 2 HOMO FN4390-S Chr5 14290558 14290559 0 0 Deletion 1 HOMO FN4390-S Chr5 17267919 17267919 0 0 Insertion 1 HET FN4390-S Chr5 2033815 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os05g04420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4390-S Chr5 20445323 20445404 0 0 Inversion 82 HET LOC_Os05g34480 expressed protein FN4390-S Chr5 22103001 22103030 0 0 Deletion 29 HOMO FN4390-S Chr5 23643688 A-G 0 0 Single Base Substitution 0 INTRON HET FN4390-S Chr5 26675029 26675035 0 0 Deletion 6 HOMO FN4390-S Chr5 6386489 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr5 8484487 8484488 0 0 Deletion 1 HOMO FN4390-S Chr6 14987001 15009000 0 0 Deletion 22000 HET LOC_Os06g25640 retrotransposon protein, putative, unclassified FN4390-S Chr6 14987001 15009000 0 0 Deletion 22000 HET LOC_Os06g25650 retrotransposon protein, putative, Ty3-gypsy subclass FN4390-S Chr6 14987001 15009000 0 0 Deletion 22000 HET LOC_Os06g25660 transposon protein, putative, unclassified, expressed FN4390-S Chr6 14987001 15009000 0 0 Deletion 22000 HET LOC_Os06g25670 expressed protein FN4390-S Chr6 14987001 15009000 0 0 Deletion 22000 HET LOC_Os06g25680 transposon protein, putative, CACTA, En/Spm sub-class FN4390-S Chr6 24697806 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr6 29270737 29270737 0 0 Insertion 1 HET FN4390-S Chr6 4182398 G-A 0 0 Single Base Substitution 0 INTRON HET FN4390-S Chr6 53848 53850 0 0 Deletion 2 HOMO FN4390-S Chr7 11139930 11139930 0 0 Insertion 75 HET FN4390-S Chr7 13815268 13815268 0 0 Insertion 4 HET FN4390-S Chr7 14100651 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr7 29627453 Chr1 5877593 0 Translocation 0 HET LOC_Os07g49460 response regulator receiver domain containing protein, expressed FN4390-S Chr7 29627457 Chr1 12991771 0 Translocation 0 HET LOC_Os07g49460 response regulator receiver domain containing protein, expressed FN4390-S Chr8 12903154 12903158 0 0 Deletion 4 HOMO FN4390-S Chr8 15303522 15303523 0 0 Deletion 1 HOMO FN4390-S Chr8 18225179 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4390-S Chr8 18644037 18644037 0 0 Insertion 1 HET FN4390-S Chr8 21018250 C-A 0 0 Single Base Substitution 0 INTRON HET FN4390-S Chr8 23038996 23038997 0 0 Deletion 1 HOMO FN4390-S Chr8 24138366 24138366 0 0 Insertion 1 HET LOC_Os08g38100 LTPL131 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed FN4390-S Chr9 13520472 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os09g22370 expressed protein FN4390-S Chr9 13520473 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os09g22370 expressed protein FN4390-S Chr9 20417839 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g35530 expressed protein FN4390-S Chr9 3029982 3029984 0 0 Deletion 2 HOMO FN4390-S Chr9 3197569 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4390-S Chr9 5788775 T-C 0 0 Single Base Substitution 0 INTERGENIC HET