FN4393-S Chr1 10678015 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN4393-S Chr1 10945786 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr1 12668065 12668077 0 0 Deletion 12 HOMO FN4393-S Chr1 13332186 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr1 16462431 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g29370 retrotransposon protein, putative, unclassified, expressed FN4393-S Chr1 17038673 G-T 0 0 Single Base Substitution 0 INTRON HET FN4393-S Chr1 22875964 22875965 0 0 Deletion 1 HOMO FN4393-S Chr1 26675926 26675933 0 0 Deletion 7 HOMO LOC_Os01g46780 transposon protein, putative, unclassified, expressed FN4393-S Chr1 29840765 29840803 0 0 Deletion 38 HOMO FN4393-S Chr1 32458197 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr1 34440691 A-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os01g59560 protein kinase domain containing protein, expressed FN4393-S Chr1 39039603 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr1 40686328 40686336 0 0 Deletion 8 HOMO FN4393-S Chr1 7576235 8463413 0 0 Inversion 887179 HET LOC_Os01g13540 NIN, putative, expressed FN4393-S Chr1 7576243 8463420 0 0 Inversion 887178 HET LOC_Os01g13540 NIN, putative, expressed FN4393-S Chr10 11727341 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4393-S Chr10 19318361 19318370 0 0 Deletion 9 HOMO LOC_Os10g36140 retrotransposon protein, putative, unclassified, expressed FN4393-S Chr10 3254096 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr10 3453028 3453080 0 0 Deletion 52 HOMO FN4393-S Chr10 4827129 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g08920 retrotransposon protein, putative, unclassified, expressed FN4393-S Chr10 663107 663108 0 0 Deletion 1 HOMO FN4393-S Chr10 7696469 7696482 0 0 Deletion 13 HOMO LOC_Os10g14194 POEI28 - Pollen Ole e I allergen and extensin family protein precursor, expressed FN4393-S Chr11 10132363 10132366 0 0 Deletion 3 HOMO FN4393-S Chr11 10285493 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr11 11974037 C-T 0 0 Single Base Substitution 0 INTRON HET FN4393-S Chr11 13213908 13213908 0 0 Insertion 2 HET FN4393-S Chr11 23628834 A-G 0 0 Single Base Substitution 0 INTRON HET FN4393-S Chr11 3528763 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g07080 transposon protein, putative, unclassified, expressed FN4393-S Chr11 3552895 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g07130 receptor kinase, putative, expressed FN4393-S Chr11 3552896 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4393-S Chr11 9336481 9336481 0 0 Insertion 1 HET FN4393-S Chr12 11914926 11914929 0 0 Deletion 3 HOMO FN4393-S Chr12 1663864 1663870 0 0 Deletion 6 HOMO FN4393-S Chr12 17683833 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4393-S Chr12 1926561 1926564 0 0 Deletion 3 HOMO LOC_Os12g04520 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed FN4393-S Chr12 20440309 G-T 0 0 Single Base Substitution 0 INTRON HOMO FN4393-S Chr12 27002006 Chr3 30879797 0 Translocation 0 HET FN4393-S Chr12 344401 344404 0 0 Deletion 3 HOMO FN4393-S Chr12 4152052 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr12 4528556 A-G 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN4393-S Chr12 5290626 5290627 0 0 Deletion 1 HOMO FN4393-S Chr12 9557381 A-G 0 0 Single Base Substitution 0 INTRON HET FN4393-S Chr2 10273294 10273300 0 0 Deletion 6 HOMO FN4393-S Chr2 10803958 10803959 0 0 Deletion 1 HOMO FN4393-S Chr2 10864110 10864114 0 0 Deletion 4 HOMO FN4393-S Chr2 13341930 13341931 0 0 Deletion 1 HOMO FN4393-S Chr2 13814610 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr2 16027264 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4393-S Chr2 16807364 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr2 16899911 16899918 0 0 Deletion 7 HOMO FN4393-S Chr2 16902060 16902066 0 0 Deletion 6 HOMO FN4393-S Chr2 16902078 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr2 18693249 18778549 0 0 Inversion 85301 HET FN4393-S Chr2 18693270 18778566 0 0 Inversion 85297 HET FN4393-S Chr2 19894616 19894619 0 0 Deletion 3 HOMO FN4393-S Chr2 21110653 21110653 0 0 Insertion 2 HET FN4393-S Chr2 24705420 24705421 0 0 Deletion 1 HOMO FN4393-S Chr2 27753552 27753554 0 0 Deletion 2 HOMO FN4393-S Chr2 30771955 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr2 32476208 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr2 34258526 C-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN4393-S Chr2 34768141 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4393-S Chr2 38376 T-C 0 0 Single Base Substitution 0 INTRON HET FN4393-S Chr2 7967599 7967600 0 0 Deletion 1 HOMO FN4393-S Chr2 8003840 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr3 10308797 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4393-S Chr3 13894370 13894370 0 0 Insertion 1 HOMO FN4393-S Chr3 27393998 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr3 27529037 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g48350 retrotransposon protein, putative, unclassified, expressed FN4393-S Chr3 31895584 T-G 0 0 Single Base Substitution 0 INTRON HET FN4393-S Chr3 34777052 34777068 0 0 Deletion 16 HOMO FN4393-S Chr3 36068495 36068496 0 0 Deletion 1 HOMO FN4393-S Chr3 5705757 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4393-S Chr3 5715417 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4393-S Chr4 10331489 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr4 13315542 13332772 0 0 Inversion 17231 HET FN4393-S Chr4 13315552 13332776 0 0 Inversion 17225 HET FN4393-S Chr4 13316803 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr4 16725284 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr4 17074583 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr4 19173511 19173518 0 0 Deletion 7 HOMO FN4393-S Chr4 19174135 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr4 24680367 24680367 0 0 Insertion 19 HET FN4393-S Chr4 27573298 27573299 0 0 Deletion 1 HOMO FN4393-S Chr4 28423559 28423561 0 0 Deletion 2 HOMO FN4393-S Chr4 32914416 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr4 6024459 6024460 0 0 Deletion 1 HOMO FN4393-S Chr4 702683 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr4 8623757 8623757 0 0 Insertion 1 HET FN4393-S Chr5 10667149 10667152 0 0 Deletion 3 HOMO FN4393-S Chr5 13596431 13596437 0 0 Deletion 6 HOMO FN4393-S Chr5 14539174 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g25100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4393-S Chr5 1800182 1800182 0 0 Insertion 1 HET FN4393-S Chr5 22668675 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr5 28308988 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr5 3119227 3119228 0 0 Deletion 1 HOMO FN4393-S Chr5 3230909 3230921 0 0 Deletion 12 HOMO FN4393-S Chr5 6676087 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN4393-S Chr5 6709486 6709490 0 0 Deletion 4 HOMO FN4393-S Chr5 72335 72337 0 0 Deletion 2 HOMO FN4393-S Chr6 10433288 10433292 0 0 Deletion 4 HOMO FN4393-S Chr6 12726001 12766000 0 0 Deletion 40000 HOMO LOC_Os06g22000 expressed protein FN4393-S Chr6 12726001 12766000 0 0 Deletion 40000 HOMO LOC_Os06g22010 ubiquinone oxidoreductase, putative, expressed FN4393-S Chr6 12726001 12766000 0 0 Deletion 40000 HOMO LOC_Os06g22020 cytochrome P450, putative, expressed FN4393-S Chr6 12726001 12766000 0 0 Deletion 40000 HOMO LOC_Os06g22030 AT hook motif domain containing protein, expressed FN4393-S Chr6 13371736 13588668 0 0 Inversion 216933 HOMO LOC_Os06g23274 zinc finger, C3HC4 type, domain containing protein, expressed FN4393-S Chr6 13371781 13588669 0 0 Inversion 216889 HOMO LOC_Os06g23274 zinc finger, C3HC4 type, domain containing protein, expressed FN4393-S Chr6 13989584 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4393-S Chr6 1401530 1401531 0 0 Deletion 1 HOMO FN4393-S Chr6 14650687 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4393-S Chr6 16629384 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4393-S Chr6 19650498 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4393-S Chr6 25625736 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr6 29006143 29006220 0 0 Deletion 77 HOMO FN4393-S Chr6 3758772 3758773 0 0 Deletion 1 HOMO FN4393-S Chr6 7811446 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr6 7817048 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr6 8014569 8014570 0 0 Deletion 1 HOMO FN4393-S Chr7 12860301 12860301 0 0 Insertion 1 HET FN4393-S Chr7 14403045 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr7 22403126 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr7 24594964 C-G 0 0 Single Base Substitution 0 INTRON HET FN4393-S Chr7 4251107 4251113 0 0 Deletion 6 HOMO FN4393-S Chr7 695639 695639 0 0 Insertion 1 HET FN4393-S Chr8 11206561 11206585 0 0 Deletion 24 HOMO LOC_Os08g18770 retrotransposon protein, putative, unclassified, expressed FN4393-S Chr8 13530889 13530890 0 0 Deletion 1 HOMO LOC_Os08g22420 retrotransposon protein, putative, unclassified, expressed FN4393-S Chr8 13638765 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN4393-S Chr8 20753999 20754021 0 0 Deletion 22 HOMO FN4393-S Chr8 25048108 25048108 0 0 Insertion 8 HET FN4393-S Chr8 5944680 G-T 0 0 Single Base Substitution 0 INTRON HET FN4393-S Chr8 9911702 9911702 0 0 Insertion 4 HET FN4393-S Chr9 2514954 T-A 0 0 Single Base Substitution 0 INTRON HET FN4393-S Chr9 8263178 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4393-S Chr9 8390212 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os09g14180 retrotransposon protein, putative, unclassified, expressed