FN4395-S Chr1 10662999 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4395-S Chr1 1314466 1314466 0 0 Insertion 16 HET FN4395-S Chr1 15637406 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr1 21944288 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN4395-S Chr1 25427339 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr1 26548216 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g46626 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4395-S Chr1 33804098 A-G 0 0 Single Base Substitution 0 INTRON HET FN4395-S Chr1 396366 396366 0 0 Insertion 2 HET FN4395-S Chr10 11791873 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr10 16882081 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4395-S Chr10 20270570 20270579 0 0 Deletion 9 HOMO FN4395-S Chr10 5081996 5081997 0 0 Deletion 1 HOMO FN4395-S Chr11 20495143 20495144 0 0 Deletion 1 HOMO FN4395-S Chr11 23648900 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr11 3897504 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr11 4801321 4801321 0 0 Insertion 1 HET FN4395-S Chr11 4923974 4923976 0 0 Deletion 2 HOMO FN4395-S Chr11 9981486 9981486 0 0 Insertion 1 HET FN4395-S Chr12 15389665 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4395-S Chr12 15389667 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g26340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4395-S Chr12 18996140 18996141 0 0 Deletion 1 HOMO FN4395-S Chr12 19491864 19491867 0 0 Deletion 3 HOMO FN4395-S Chr12 21433247 C-G 0 0 Single Base Substitution 0 INTRON HOMO FN4395-S Chr12 24587178 24587193 0 0 Deletion 15 HOMO FN4395-S Chr12 7385920 7385922 0 0 Deletion 2 HOMO FN4395-S Chr12 7851717 7851721 0 0 Deletion 4 HOMO FN4395-S Chr12 9106956 9106958 0 0 Deletion 2 HOMO FN4395-S Chr12 9977351 9977358 0 0 Deletion 7 HOMO FN4395-S Chr2 10904835 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr2 11186660 11186662 0 0 Deletion 2 HOMO FN4395-S Chr2 14962313 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN4395-S Chr2 15713348 15713351 0 0 Deletion 3 HOMO FN4395-S Chr2 23510882 23510883 0 0 Deletion 1 HOMO FN4395-S Chr2 24743571 G-A 0 0 Single Base Substitution 0 INTRON HET FN4395-S Chr2 6168335 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr3 14781870 14781887 0 0 Deletion 17 HOMO FN4395-S Chr3 17515041 17515042 0 0 Deletion 1 HOMO FN4395-S Chr3 19577286 19577286 0 0 Insertion 1 HET FN4395-S Chr3 22821183 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr3 28016786 28016786 0 0 Insertion 2 HET FN4395-S Chr3 33585325 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr4 13696780 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr4 14402308 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr4 18147836 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr4 26920556 26920556 0 0 Insertion 81 HET LOC_Os04g45490 elongation factor, putative, expressed FN4395-S Chr4 3503148 3503149 0 0 Deletion 1 HOMO FN4395-S Chr5 11520923 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4395-S Chr5 14281081 14281084 0 0 Deletion 3 HOMO FN4395-S Chr5 25187034 25352911 0 0 Inversion 165878 HOMO LOC_Os05g43290 expressed protein FN4395-S Chr5 25187044 25352921 0 0 Inversion 165878 HOMO FN4395-S Chr5 25667449 25667459 0 0 Deletion 10 HOMO LOC_Os05g44180 osFTL10 FT-Like10 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed FN4395-S Chr5 29795895 29795899 0 0 Deletion 4 HOMO FN4395-S Chr5 3649006 3649012 0 0 Deletion 6 HOMO FN4395-S Chr5 3661946 3661962 0 0 Deletion 16 HOMO FN4395-S Chr5 500547 500547 0 0 Insertion 2 HET FN4395-S Chr6 1013860 C-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN4395-S Chr6 12006873 12006889 0 0 Deletion 16 HOMO FN4395-S Chr6 12662024 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4395-S Chr6 14715432 14715433 0 0 Deletion 1 HOMO FN4395-S Chr6 20142081 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4395-S Chr6 21655537 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN4395-S Chr6 24458069 24458074 0 0 Deletion 5 HOMO FN4395-S Chr6 29797737 29797738 0 0 Deletion 1 HOMO FN4395-S Chr6 5610574 5610575 0 0 Deletion 1 HOMO LOC_Os06g10740 transposon protein, putative, unclassified, expressed FN4395-S Chr6 6327940 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr6 8170442 8170442 0 0 Insertion 15 HET FN4395-S Chr7 10134930 10134932 0 0 Deletion 2 HOMO FN4395-S Chr7 17464001 17464002 0 0 Deletion 1 HOMO FN4395-S Chr7 27764606 27764674 0 0 Deletion 68 HOMO FN4395-S Chr7 4174071 4174072 0 0 Deletion 1 HOMO FN4395-S Chr7 7023334 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr7 9949458 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os07g16910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4395-S Chr8 10523259 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4395-S Chr8 15888081 15888082 0 0 Deletion 1 HOMO FN4395-S Chr8 21971791 21971792 0 0 Deletion 1 HOMO FN4395-S Chr8 3004145 3004146 0 0 Deletion 1 HOMO FN4395-S Chr8 6336932 T-C 0 0 Single Base Substitution 0 INTRON HET FN4395-S Chr8 6443606 6443634 0 0 Deletion 28 HOMO FN4395-S Chr9 20303192 20303192 0 0 Insertion 1 HET FN4395-S Chr9 2449714 2449715 0 0 Deletion 1 HOMO FN4395-S Chr9 714918 714919 0 0 Deletion 1 HOMO