FN440-S Chr1 12831002 12831005 0 0 Deletion 3 FN440-S Chr1 24630050 24631685 0 0 Deletion 1635 LOC_Os01g43160 polygalacturonase, putative, expressed FN440-S Chr1 42712332 42712332 0 0 Insertion 1 FN440-S Chr1 7388955 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN440-S Chr10 12516075 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN440-S Chr10 13651342 13651352 0 0 Deletion 10 FN440-S Chr10 21799171 21799174 0 0 Deletion 3 LOC_Os10g40640 glycosyl transferase 8 domain containing protein, putative, expressed FN440-S Chr10 6502013 G-C 0 0 Single Base Substitution 0 INTRON HOMO FN440-S Chr11 19260296 19290412 0 0 Inversion 30116 LOC_Os11g32660 transposon protein, putative, unclassified, expressed FN440-S Chr11 19260307 19290415 0 0 Inversion 30108 LOC_Os11g32660 transposon protein, putative, unclassified, expressed FN440-S Chr11 2676687 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN440-S Chr11 6964439 Chr6 8927029 0 Translocation 0 LOC_Os06g15740 expressed protein FN440-S Chr11 6964439 Chr6 8927029 0 Translocation 0 LOC_Os11g12460 serpin domain containing protein, putative, expressed FN440-S Chr12 13339089 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN440-S Chr12 16865744 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN440-S Chr2 2483561 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN440-S Chr2 33295822 33295824 0 0 Deletion 2 FN440-S Chr2 4345924 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN440-S Chr3 24587325 24587326 0 0 Deletion 1 FN440-S Chr3 32762001 32774000 0 0 Deletion 12000 LOC_Os03g57470 retrotransposon protein, putative, unclassified, expressed FN440-S Chr3 32762001 32774000 0 0 Deletion 12000 LOC_Os03g57480 retrotransposon protein, putative, unclassified, expressed FN440-S Chr3 34302076 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN440-S Chr3 34302079 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN440-S Chr4 13564858 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN440-S Chr4 19310891 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN440-S Chr4 32017904 32017908 0 0 Deletion 4 LOC_Os04g53730 expressed protein FN440-S Chr4 7725351 C-T 0 0 Single Base Substitution 0 INTRON HET FN440-S Chr5 12334387 12341514 0 0 Deletion 7127 LOC_Os05g20970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN440-S Chr5 15211363 G-T 0 0 Single Base Substitution 0 INTRON HET FN440-S Chr5 24615409 24615412 0 0 Deletion 3 FN440-S Chr5 818597 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN440-S Chr5 8877551 9128018 0 0 Inversion 250467 LOC_Os05g15710 hypothetical protein FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15710 hypothetical protein FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15720 expressed protein FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15730 retrotransposon, putative, centromere-specific, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15740 expressed protein FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15750 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15760 retrotransposon protein, putative, unclassified FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15770 glycosyl hydrolase, putative, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15780 hypothetical protein FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15790 expressed protein FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15800 expressed protein FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15810 retrotransposon protein, putative, Ty1-copia subclass, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15820 retrotransposon protein, putative, unclassified, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15850 glycosyl hydrolase, putative, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15860 retrotransposon protein, putative, unclassified, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15870 expressed protein FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15880 glycosyl hydrolase, putative, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15890 SNF2 family N-terminal domain containing protein, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15900 expressed protein FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15910 expressed protein FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15920 glycosyl hydrolase, putative, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15930 transposon protein, putative, unclassified, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15940 retrotransposon protein, putative, unclassified, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15950 retrotransposon protein, putative, unclassified, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15960 retrotransposon protein, putative, unclassified, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g15990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g16000 expressed protein FN440-S Chr5 8878001 9049000 0 0 Deletion 171000 LOC_Os05g16010 retrotransposon protein, putative, LINE subclass, expressed FN440-S Chr5 9048930 9128039 0 0 Inversion 79109 FN440-S Chr5 9679525 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN440-S Chr6 12022647 12022664 0 0 Deletion 17 FN440-S Chr6 12524160 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN440-S Chr6 25334967 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g42200 retrotransposon protein, putative, unclassified, expressed FN440-S Chr7 10328879 10328886 0 0 Deletion 7 LOC_Os07g17490 expressed protein FN440-S Chr7 11832100 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g20490 retrotransposon protein, putative, unclassified, expressed FN440-S Chr7 19455131 19455138 0 0 Deletion 7 LOC_Os07g32620 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed FN440-S Chr7 23995263 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN440-S Chr7 24313236 24313236 0 0 Insertion 2 FN440-S Chr7 24982855 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN440-S Chr7 27218674 T-C 0 0 Single Base Substitution 0 INTRON HET FN440-S Chr7 27218822 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN440-S Chr7 6241183 Chr3 31257961 0 Translocation 0 LOC_Os03g54980 expressed protein FN440-S Chr8 22367222 22367228 0 0 Deletion 6 FN440-S Chr8 22864186 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN440-S Chr9 14553353 14553354 0 0 Deletion 1 FN440-S Chr9 16905094 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN440-S Chr9 18569513 18569514 0 0 Deletion 1 LOC_Os09g30474 BPI/LBP family protein At3g20270 precursor, putative, expressed FN440-S Chr9 2967118 A-G 0 0 Single Base Substitution 0 INTRON HOMO