FN4404-S Chr1 10040245 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4404-S Chr1 10344920 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr1 14087252 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr1 14589392 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g25740 powdery mildew resistance protein PM3F, putative, expressed FN4404-S Chr1 22812530 22812660 0 0 Inversion 131 HET FN4404-S Chr1 26289232 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr1 31574610 31574671 0 0 Inversion 62 HET FN4404-S Chr1 33858671 33858672 0 0 Deletion 1 HOMO FN4404-S Chr1 40070438 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr1 42409690 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr1 43111697 43111698 0 0 Deletion 1 HOMO FN4404-S Chr1 43258401 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g74680 retrotransposon protein, putative, unclassified, expressed FN4404-S Chr1 77645 77797 0 0 Inversion 153 HET LOC_Os01g01150 RNA recognition motif, putative, expressed FN4404-S Chr10 11844230 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr10 18987084 18987084 0 0 Insertion 1 HET FN4404-S Chr10 22439441 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr10 9594315 9594315 0 0 Insertion 1 HET FN4404-S Chr11 12097975 12097978 0 0 Deletion 3 HOMO FN4404-S Chr11 13996850 T-G 0 0 Single Base Substitution 0 INTRON HET FN4404-S Chr11 1625333 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr11 18686936 18687010 0 0 Inversion 75 HET FN4404-S Chr11 21118211 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g35950 retrotransposon protein, putative, unclassified FN4404-S Chr11 23923214 23923216 0 0 Deletion 2 HOMO FN4404-S Chr11 24206034 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr11 369306 369306 0 0 Insertion 1 HET FN4404-S Chr11 6211366 6211440 0 0 Deletion 74 HOMO FN4404-S Chr11 8087822 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4404-S Chr11 8629484 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr12 11984230 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr12 13597633 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g23920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4404-S Chr12 1383670 Chr4 2484079 0 Translocation 0 HET FN4404-S Chr12 1395251 Chr4 2484081 0 Translocation 0 HET FN4404-S Chr12 22699043 22699044 0 0 Deletion 1 HOMO FN4404-S Chr12 26634877 26634878 0 0 Deletion 1 HOMO FN4404-S Chr12 3071589 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr12 6889486 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr12 8762333 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr2 21115098 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g35150 splicing factor U2AF, putative, expressed FN4404-S Chr2 24114509 24114510 0 0 Deletion 1 HOMO FN4404-S Chr2 24125643 24125730 0 0 Deletion 87 HOMO FN4404-S Chr2 24759732 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr2 27599667 27599667 0 0 Insertion 1 HET FN4404-S Chr2 34000280 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr2 3546514 3546514 0 0 Insertion 1 HET FN4404-S Chr2 5101799 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr2 5510934 5510936 0 0 Deletion 2 HOMO FN4404-S Chr2 8918038 8918038 0 0 Insertion 1 HOMO FN4404-S Chr3 17197960 17197964 0 0 Deletion 4 HOMO LOC_Os03g30120 expressed protein FN4404-S Chr3 18810132 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr3 18857548 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr3 19388857 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr3 2222123 2222124 0 0 Deletion 1 HOMO FN4404-S Chr3 24866347 24866347 0 0 Insertion 3 HET LOC_Os03g44250 expressed protein FN4404-S Chr3 29096730 29096730 0 0 Insertion 1 HET FN4404-S Chr3 4660003 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr3 5863582 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN4404-S Chr4 13536314 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr4 15515476 C-T 0 0 Single Base Substitution 0 INTRON HET FN4404-S Chr4 17558282 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr4 19900127 19900127 0 0 Insertion 2 HET FN4404-S Chr4 23184335 23184335 0 0 Insertion 1 HET FN4404-S Chr4 30174987 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr4 30851457 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4404-S Chr4 33916560 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr4 8290485 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN4404-S Chr5 11150425 T-C 0 0 Single Base Substitution 0 INTRON HET FN4404-S Chr5 11152626 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g19210 retrotransposon protein, putative, unclassified, expressed FN4404-S Chr5 12620954 12620954 0 0 Insertion 2 HET FN4404-S Chr5 14251929 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr5 17903500 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4404-S Chr5 20864117 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr5 21472612 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr5 2238257 2238257 0 0 Insertion 1 HET FN4404-S Chr5 22679791 22679952 0 0 Inversion 162 HET FN4404-S Chr5 27594133 27594133 0 0 Insertion 1 HET FN4404-S Chr5 448232 448236 0 0 Deletion 4 HOMO LOC_Os05g01730 drought induced 19 protein, putative, expressed FN4404-S Chr5 882702 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr5 9919740 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr6 15479912 15479913 0 0 Deletion 1 HOMO FN4404-S Chr6 24952450 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr6 3285979 3286195 0 0 Inversion 217 HET FN4404-S Chr6 5204985 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr6 9642443 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr7 112228 112228 0 0 Insertion 12 HET FN4404-S Chr7 11742186 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr7 12929411 12929411 0 0 Insertion 1 HET FN4404-S Chr7 1308316 1308316 0 0 Insertion 12 HET FN4404-S Chr7 17460594 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr7 17874789 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN4404-S Chr7 18067884 18067884 0 0 Insertion 1 HET FN4404-S Chr7 24971119 24971122 0 0 Deletion 3 HOMO LOC_Os07g41670 transposon protein, putative, unclassified FN4404-S Chr7 25645252 C-T 0 0 Single Base Substitution 0 INTRON HET FN4404-S Chr7 26459527 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr7 27751185 27751186 0 0 Deletion 1 HOMO FN4404-S Chr7 29519132 29519133 0 0 Deletion 1 HOMO FN4404-S Chr7 4700793 4700794 0 0 Deletion 1 HOMO FN4404-S Chr7 4859540 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr7 596290 596380 0 0 Inversion 91 HET FN4404-S Chr7 7999282 7999282 0 0 Insertion 1 HET FN4404-S Chr8 12649837 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr8 16941012 G-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4404-S Chr8 20017031 20017032 0 0 Deletion 1 HOMO FN4404-S Chr8 20971340 20971341 0 0 Deletion 1 HOMO FN4404-S Chr8 28130340 28130343 0 0 Deletion 3 HOMO FN4404-S Chr8 3296137 3296138 0 0 Deletion 1 HOMO FN4404-S Chr8 9184146 9184146 0 0 Insertion 3 HET FN4404-S Chr9 13057149 13057149 0 0 Insertion 1 HET FN4404-S Chr9 18101090 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4404-S Chr9 2933246 2933246 0 0 Insertion 1 HET FN4404-S Chr9 3048283 3048283 0 0 Insertion 2 HET FN4404-S Chr9 3397947 3397956 0 0 Deletion 9 HOMO FN4404-S Chr9 376489 376508 0 0 Deletion 19 HOMO FN4404-S Chr9 7385407 7385407 0 0 Insertion 2 HET FN4404-S Chr9 9777540 9777541 0 0 Deletion 1 HOMO LOC_Os09g16000 NBS-LRR disease resistance protein, putative, expressed