FN4434-S Chr1 10687574 10687778 0 0 Inversion 205 HET FN4434-S Chr1 13022362 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4434-S Chr1 20981964 20981964 0 0 Insertion 1 HET FN4434-S Chr1 21619219 21619228 0 0 Deletion 9 HOMO FN4434-S Chr1 25044988 25044988 0 0 Insertion 1 HET FN4434-S Chr1 25807251 25807252 0 0 Deletion 1 HOMO FN4434-S Chr1 26082777 26083061 0 0 Inversion 285 HET FN4434-S Chr1 2956577 2956577 0 0 Insertion 43 HET FN4434-S Chr1 29686007 29686008 0 0 Deletion 1 HOMO LOC_Os01g51650 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr1 30748895 30775583 0 0 Inversion 26689 HET LOC_Os01g53550 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53640 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53650 zinc finger CCCH type family protein, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53660 transposon protein, putative, unclassified, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53670 ENTH domain containing protein, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53680 6-phosphofructokinase, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53690 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53700 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53710 dual specificity protein phosphatase, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53720 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53730 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53740 hypothetical protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53750 glucan endo-1,3-beta-glucosidase precursor, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53760 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53770 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53779 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53790 stress-induced protein, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53800 glutamate carboxypeptidase 2, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53810 peptidase, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53820 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53830 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53840 protein kinase family protein, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53850 hypothetical protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53860 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53870 transposon protein, putative, unclassified, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53880 OsIAA6 - Auxin-responsive Aux/IAA gene family member, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53890 RNA methyltransferase, TrmH family protein, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53900 elongation factor, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53910 dehydrogenase, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53920 receptor-like protein kinase 5 precursor, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53930 hexokinase, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53940 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53950 retrotransposon protein, putative, Ty3-gypsy subclass FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53970 circumsporozoite protein precursor, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53980 IQ calmodulin-binding motif family protein, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g53990 pectinesterase, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54000 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54010 peptidase, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54020 tRNA synthetase, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54030 NADP-dependent malic enzyme, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54040 ATP-dependent protease La, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54050 histidine-containing phosphotransfer protein, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54060 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54070 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54080 kinesin motor protein-related, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54090 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54100 CK1_CaseinKinase_1a.2 - CK1 includes the casein kinase 1 kinases, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54119 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54140 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54150 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54160 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54170 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54180 DUF640 domain containing protein, putative, expressed FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54190 expressed protein FN4434-S Chr1 30814001 31187000 0 0 Deletion 373000 HET LOC_Os01g54210 GATA zinc finger domain containing protein, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54230 expressed protein FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54240 nucleoporin, putative, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54250 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54260 retrotransposon protein, putative, unclassified FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54270 transposon protein, putative, unclassified, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54280 conserved hypothetical protein FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54290 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54300 OsMan02 - Endo-Beta-Mannanase, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54310 hypothetical protein FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54320 hypothetical protein FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54330 retrotransposon protein, putative, unclassified FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54340 plant-specific domain TIGR01615 family protein, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54350 protein kinase domain containing protein, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54360 expressed protein FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54370 dihydropyrimidinase, putative, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54380 PPR repeat domain containing protein, putative, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54390 S4 domain containing protein, putative, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54400 VQ domain containing protein, putative, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54410 hypothetical protein FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54420 dynamin family protein, putative, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54424 expressed protein FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54430 plastocyanin-like domain containing protein, putative, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54440 expressed protein FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54450 DUF584 domain containing protein, putative, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54460 expressed protein FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54470 GDSL-like lipase/acylhydrolase, putative, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54480 serine/threonine protein kinase, putative, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54490 osFTL9 FT-Like9 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54510 MAC/Perforin domain containing protein, putative, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54515 peptide transporter PTR2, putative, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54520 DUF1264 domain containing protein, putative, expressed FN4434-S Chr1 31195001 31365000 0 0 Deletion 170000 HET LOC_Os01g54530 hydrolase, acting on carbon-nitrogen, putative, expressed FN4434-S Chr1 31247855 31247857 0 0 Deletion 2 HOMO FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54540 ribosomal protein L13, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54550 HSF-type DNA-binding domain containing protein, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54560 trehalose synthase, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54570 DUF623 domain containing protein, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54580 transporter family protein, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54590 ras-related protein, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54600 WRKY13, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54610 retrotransposon protein, putative, unclassified FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54620 CESA4 - cellulose synthase, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54630 leucine rich repeat family protein, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54640 retrotransposon protein, putative, unclassified FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54650 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54660 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54670 coiled-coil domain-containing protein 25, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54680 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54690 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54700 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54714 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54730 expressed protein FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54740 transposon protein, putative, unclassified, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54750 expressed protein FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54760 hypothetical protein FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54770 expressed protein FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54784 expressed protein FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54800 expressed protein FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54810 lipase, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54850 OsFBX24 - F-box domain containing protein, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54860 enoyl-CoA hydratase/isomerase family protein, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54870 60S ribosomal protein L18a, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54880 glucosidase 2 subunit beta precursor, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54890 ethylene-responsive transcription factor 2, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54900 lipid-A-disaccharide synthase family protein, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54910 GTP-binding protein typA/bipA, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54920 heat- and acid-stable phosphoprotein, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54930 one zinc finger protein, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54940 dehydrogenase, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54950 expressed protein FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54960 expressed protein FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54969 O-methyltransferase, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54980 expressed protein FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g54990 auxin response factor, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g55000 expressed protein FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g55010 EBNA-1, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g55020 expressed protein FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g55030 DNA-binding protein-related, putative, expressed FN4434-S Chr1 31367001 31642000 0 0 Deletion 275000 HET LOC_Os01g55040 1,3-beta-glucan synthase component, putative, expressed FN4434-S Chr1 3327788 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN4434-S Chr1 34925376 34925379 0 0 Deletion 3 HOMO LOC_Os01g60380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4434-S Chr1 35543820 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g61460 leaf senescence related protein, putative, expressed FN4434-S Chr1 7146495 7146496 0 0 Deletion 1 HOMO FN4434-S Chr1 8959287 8959287 0 0 Insertion 6 HET FN4434-S Chr10 10699091 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4434-S Chr10 15932681 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g30610 white-brown complex homolog protein, putative, expressed FN4434-S Chr10 21689157 21689157 0 0 Insertion 2 HET FN4434-S Chr10 22719832 22719832 0 0 Insertion 16 HET FN4434-S Chr10 3901766 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4434-S Chr10 4059034 4059034 0 0 Insertion 14 HET FN4434-S Chr10 5838816 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4434-S Chr10 6256527 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4434-S Chr10 9070801 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4434-S Chr10 9983433 9983434 0 0 Deletion 1 HOMO FN4434-S Chr11 14480752 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN4434-S Chr11 17327854 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4434-S Chr11 20630907 20630907 0 0 Insertion 1 HET FN4434-S Chr11 22812508 22812508 0 0 Insertion 3 HOMO FN4434-S Chr11 2608001 2618000 0 0 Deletion 10000 HOMO LOC_Os11g05700 ABC transporter family protein, putative, expressed FN4434-S Chr11 2623001 2633000 0 0 Deletion 10000 HOMO LOC_Os11g05720 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr11 2623001 2633000 0 0 Deletion 10000 HOMO LOC_Os11g05730 histone H3, putative, expressed FN4434-S Chr11 2623001 2633000 0 0 Deletion 10000 HOMO LOC_Os11g05740 B3 DNA binding domain containing protein, expressed FN4434-S Chr12 18225025 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4434-S Chr12 18912949 18913111 0 0 Inversion 163 HET LOC_Os12g31440 expressed protein FN4434-S Chr12 22891456 22891457 0 0 Deletion 1 HOMO FN4434-S Chr12 25840229 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g41720 PLA IIIA/PLP7, putative, expressed FN4434-S Chr12 27324111 27324111 0 0 Insertion 1 HET FN4434-S Chr12 4156527 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4434-S Chr12 4624099 4624101 0 0 Deletion 2 HOMO FN4434-S Chr2 10199560 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN4434-S Chr2 11546562 11546562 0 0 Insertion 4 HET FN4434-S Chr2 20156928 20156929 0 0 Deletion 1 HOMO FN4434-S Chr2 20972656 20972658 0 0 Deletion 2 HOMO FN4434-S Chr2 24737607 A-G 0 0 Single Base Substitution 0 INTRON HET FN4434-S Chr2 32108903 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4434-S Chr2 33210455 Chr1 15782035 0 Translocation 0 HET FN4434-S Chr2 33210461 Chr1 15781607 0 Translocation 0 HET FN4434-S Chr2 4883156 4883157 0 0 Deletion 1 HOMO FN4434-S Chr3 15789344 15789344 0 0 Insertion 2 HET FN4434-S Chr3 16667089 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4434-S Chr3 1838424 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g04030 HVA22, putative, expressed FN4434-S Chr3 19759561 19759561 0 0 Insertion 1 HET FN4434-S Chr3 34069996 34069997 0 0 Deletion 1 HOMO FN4434-S Chr3 34698635 34698635 0 0 Insertion 2 HET FN4434-S Chr3 4729866 4729921 0 0 Deletion 55 HOMO FN4434-S Chr4 11009132 11009133 0 0 Deletion 1 HOMO FN4434-S Chr4 15325223 C-A 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr4 19045630 C-T 0 0 Single Base Substitution 0 INTRON HET FN4434-S Chr4 21132366 G-A 0 0 Single Base Substitution 0 INTRON HET FN4434-S Chr4 28232076 T-C 0 0 Single Base Substitution 0 INTRON HET FN4434-S Chr4 28235348 28235349 0 0 Deletion 1 HOMO FN4434-S Chr4 29986072 29986072 0 0 Insertion 2 HET FN4434-S Chr4 6468109 6468109 0 0 Insertion 1 HET FN4434-S Chr4 7538302 7538313 0 0 Deletion 11 HOMO FN4434-S Chr5 24126885 24126885 0 0 Insertion 1 HOMO FN4434-S Chr5 24310583 Chr1 30813677 0 Translocation 0 HET LOC_Os05g41510 SH2 motif, putative, expressed FN4434-S Chr5 24310599 Chr1 30775591 0 Translocation 0 HET LOC_Os05g41510 SH2 motif, putative, expressed FN4434-S Chr5 28175193 28175193 0 0 Insertion 2 HET FN4434-S Chr5 3350122 3350123 0 0 Deletion 1 HOMO FN4434-S Chr5 4419569 4419570 0 0 Deletion 1 HOMO FN4434-S Chr5 5661449 5661449 0 0 Insertion 1 HET FN4434-S Chr6 11601996 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4434-S Chr6 13932392 13932392 0 0 Insertion 1 HET FN4434-S Chr6 15168862 15168862 0 0 Insertion 11 HET FN4434-S Chr6 20211010 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4434-S Chr6 22692693 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4434-S Chr6 25778143 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4434-S Chr6 6465980 T-G 0 0 Single Base Substitution 0 INTRON HOMO FN4434-S Chr6 8644940 8644961 0 0 Deletion 21 HOMO FN4434-S Chr7 12176321 12176322 0 0 Deletion 1 HOMO FN4434-S Chr7 17016851 17016877 0 0 Deletion 26 HOMO FN4434-S Chr7 18462803 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4434-S Chr7 18745419 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4434-S Chr7 19132261 19132262 0 0 Deletion 1 HOMO FN4434-S Chr7 2044279 2044279 0 0 Insertion 2 HET FN4434-S Chr7 26040275 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g43530 helix-loop-helix DNA-binding domain containing protein, expressed FN4434-S Chr7 26578145 26578145 0 0 Insertion 3 HET FN4434-S Chr7 29033493 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4434-S Chr7 29033494 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4434-S Chr7 420819 420819 0 0 Insertion 1 HET FN4434-S Chr7 7974001 8014000 0 0 Deletion 40000 HET LOC_Os07g13950 expressed protein FN4434-S Chr7 7974001 8014000 0 0 Deletion 40000 HET LOC_Os07g13960 retrotransposon protein, putative, unclassified FN4434-S Chr7 7974001 8014000 0 0 Deletion 40000 HET LOC_Os07g13969 expressed protein FN4434-S Chr7 7974001 8014000 0 0 Deletion 40000 HET LOC_Os07g13980 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed FN4434-S Chr7 7974001 8014000 0 0 Deletion 40000 HET LOC_Os07g13990 retrotransposon, putative, centromere-specific, expressed FN4434-S Chr7 7974001 8014000 0 0 Deletion 40000 HET LOC_Os07g14000 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr7 7974001 8014000 0 0 Deletion 40000 HET LOC_Os07g14010 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4434-S Chr7 7974001 8014000 0 0 Deletion 40000 HET LOC_Os07g14020 hypothetical protein FN4434-S Chr7 7974001 8014000 0 0 Deletion 40000 HET LOC_Os07g14030 SCP-like extracellular protein, expressed FN4434-S Chr7 7974001 8014000 0 0 Deletion 40000 HET LOC_Os07g14040 retrotransposon protein, putative, unclassified, expressed FN4434-S Chr7 9728974 9728993 0 0 Deletion 19 HOMO FN4434-S Chr8 13012161 13012161 0 0 Insertion 1 HET LOC_Os08g21710 retrotransposon protein, putative, unclassified FN4434-S Chr8 13339704 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4434-S Chr8 15064310 15064349 0 0 Deletion 39 HOMO LOC_Os08g24880 EDM2, putative, expressed FN4434-S Chr8 16832934 16832934 0 0 Insertion 2 HOMO FN4434-S Chr8 1950348 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4434-S Chr8 24766119 24766120 0 0 Deletion 1 HOMO FN4434-S Chr8 26704437 26704439 0 0 Deletion 2 HOMO FN4434-S Chr8 2699850 2699851 0 0 Deletion 1 HOMO FN4434-S Chr8 27575386 27575386 0 0 Insertion 4 HET FN4434-S Chr8 5045955 5045962 0 0 Deletion 7 HOMO FN4434-S Chr8 6219522 6219522 0 0 Insertion 1 HET FN4434-S Chr9 10376785 10376787 0 0 Deletion 2 HOMO FN4434-S Chr9 13367940 13367940 0 0 Insertion 2 HET FN4434-S Chr9 17787968 17787972 0 0 Deletion 4 HOMO FN4434-S Chr9 22595468 T-C 0 0 Single Base Substitution 0 INTRON HET FN4434-S Chr9 2504686 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4434-S Chr9 3172424 3172526 0 0 Inversion 103 HET FN4434-S Chr9 3443168 3443169 0 0 Deletion 1 HOMO LOC_Os09g07090 retrotransposon protein, putative, unclassified