FN4444-S Chr1 143793 G-A 0 0 Single Base Substitution 0 INTRON HET FN4444-S Chr1 18679822 18679823 0 0 Deletion 1 HOMO FN4444-S Chr1 18899338 18899338 0 0 Insertion 1 HET FN4444-S Chr1 20870277 20870277 0 0 Insertion 45 HET LOC_Os01g37380 transposon protein, putative, unclassified, expressed FN4444-S Chr1 22111783 22111797 0 0 Deletion 14 HOMO FN4444-S Chr1 22788535 22788535 0 0 Insertion 26 HET FN4444-S Chr1 23996415 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4444-S Chr1 5150421 5150421 0 0 Insertion 2 HOMO FN4444-S Chr10 11040736 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4444-S Chr10 12340683 12340696 0 0 Deletion 13 HOMO FN4444-S Chr10 16142228 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN4444-S Chr10 16565287 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN4444-S Chr10 21816941 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4444-S Chr10 23030699 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN4444-S Chr10 7025922 7025923 0 0 Deletion 1 HOMO FN4444-S Chr10 8579006 8579007 0 0 Deletion 1 HOMO FN4444-S Chr11 12612484 12612492 0 0 Deletion 8 HOMO FN4444-S Chr11 12870880 12879123 0 0 Inversion 8244 HOMO LOC_Os11g22430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4444-S Chr11 12870881 12879130 0 0 Inversion 8250 HOMO LOC_Os11g22430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4444-S Chr11 12901418 12901441 0 0 Deletion 23 HOMO FN4444-S Chr11 1435317 Chr4 2707693 0 Translocation 0 HET FN4444-S Chr11 1435338 Chr4 2707382 0 Translocation 0 HET FN4444-S Chr11 16152504 16152509 0 0 Deletion 5 HOMO FN4444-S Chr11 16530484 16530484 0 0 Insertion 1 HET FN4444-S Chr11 19696505 Chr10 12878065 0 Translocation 0 HET FN4444-S Chr11 22827128 Chr9 5060412 0 Translocation 0 HET LOC_Os11g38520 expressed protein FN4444-S Chr11 22827313 Chr9 5060414 0 Translocation 0 HET LOC_Os11g38520 expressed protein FN4444-S Chr11 304740 304740 0 0 Insertion 1 HET FN4444-S Chr11 4865519 5083703 0 0 Inversion 218185 HET FN4444-S Chr11 5389502 5389688 0 0 Inversion 187 HET FN4444-S Chr11 7459160 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4444-S Chr12 10496915 10496917 0 0 Deletion 2 HOMO FN4444-S Chr12 11347001 11373000 0 0 Deletion 26000 HET LOC_Os12g19530 ATP-binding region, ATPase-like domain-containing protein, putative, expressed FN4444-S Chr12 11347001 11373000 0 0 Deletion 26000 HET LOC_Os12g19549 telomerase reverse transcriptase, putative, expressed FN4444-S Chr12 14969232 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4444-S Chr12 17170756 C-G 0 0 Single Base Substitution 0 INTRON HET FN4444-S Chr12 5020286 5020287 0 0 Deletion 1 HOMO FN4444-S Chr12 8251455 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os12g14460 retrotransposon protein, putative, Ty3-gypsy subclass FN4444-S Chr2 17991533 17991548 0 0 Deletion 15 HOMO FN4444-S Chr2 25607095 25607095 0 0 Insertion 4 HET FN4444-S Chr2 951964 952173 0 0 Inversion 210 HET FN4444-S Chr3 13468455 13468459 0 0 Deletion 4 HOMO FN4444-S Chr3 13472053 13472053 0 0 Insertion 1 HET FN4444-S Chr3 18103903 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4444-S Chr3 20097015 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g36239 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4444-S Chr3 27927962 27928171 0 0 Inversion 210 HET FN4444-S Chr3 29303185 29303186 0 0 Deletion 1 HOMO FN4444-S Chr3 3141526 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g06260 retrotransposon protein, putative, unclassified, expressed FN4444-S Chr3 4459750 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4444-S Chr3 4862909 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g09310 frigida, putative, expressed FN4444-S Chr4 12476892 12476892 0 0 Insertion 19 HET FN4444-S Chr4 14157621 14157623 0 0 Deletion 2 HOMO FN4444-S Chr4 16449357 16449359 0 0 Deletion 2 HOMO FN4444-S Chr4 18043676 18043679 0 0 Deletion 3 HOMO FN4444-S Chr4 1823001 1840000 0 0 Deletion 17000 HET LOC_Os04g03990 3-5 exonuclease domain-containing protein, putative, expressed FN4444-S Chr4 20283628 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN4444-S Chr4 29092542 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN4444-S Chr4 30357093 30357096 0 0 Deletion 3 HOMO LOC_Os04g51230 retrotransposon protein, putative, unclassified, expressed FN4444-S Chr4 5289001 5345000 0 0 Deletion 56000 HOMO LOC_Os04g09860 actin, putative, expressed FN4444-S Chr4 5289001 5345000 0 0 Deletion 56000 HOMO LOC_Os04g09870 hypothetical protein FN4444-S Chr4 5289001 5345000 0 0 Deletion 56000 HOMO LOC_Os04g09880 expressed protein FN4444-S Chr4 5289001 5345000 0 0 Deletion 56000 HOMO LOC_Os04g09900 ent-kaurene synthase, chloroplast precursor, putative, expressed FN4444-S Chr4 5289001 5345000 0 0 Deletion 56000 HOMO LOC_Os04g09910 retrotransposon protein, putative, Ty3-gypsy subclass FN4444-S Chr4 5289001 5345000 0 0 Deletion 56000 HOMO LOC_Os04g09920 cytochrome P450, putative, expressed FN4444-S Chr4 5289001 5345000 0 0 Deletion 56000 HOMO LOC_Os04g09930 retrotransposon protein, putative, unclassified, expressed FN4444-S Chr4 5289001 5345000 0 0 Deletion 56000 HOMO LOC_Os04g09940 retrotransposon protein, putative, unclassified FN4444-S Chr4 8721553 8721554 0 0 Deletion 1 HOMO FN4444-S Chr4 9087079 9087081 0 0 Deletion 2 HOMO FN4444-S Chr5 10591073 10591074 0 0 Deletion 1 HOMO FN4444-S Chr5 14076675 14076878 0 0 Inversion 204 HET FN4444-S Chr5 14289905 14289906 0 0 Deletion 1 HOMO FN4444-S Chr5 15461704 15461724 0 0 Deletion 20 HOMO FN4444-S Chr5 2237367 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os05g04730 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4444-S Chr5 28745752 28745752 0 0 Insertion 1 HET FN4444-S Chr5 4871602 4871793 0 0 Inversion 192 HET FN4444-S Chr6 11366230 11366230 0 0 Insertion 3 HET LOC_Os06g19870 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4444-S Chr6 20290575 20290582 0 0 Deletion 7 HOMO FN4444-S Chr6 25540955 25541161 0 0 Inversion 207 HET FN4444-S Chr7 10122396 10122396 0 0 Insertion 1 HET FN4444-S Chr7 10484596 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4444-S Chr7 12893345 12893345 0 0 Insertion 1 HET FN4444-S Chr7 18437014 18437019 0 0 Deletion 5 HOMO FN4444-S Chr7 19283395 19283397 0 0 Deletion 2 HOMO FN4444-S Chr7 21111137 21111137 0 0 Insertion 1 HET FN4444-S Chr7 21199611 21199612 0 0 Deletion 1 HOMO FN4444-S Chr7 22622734 22622735 0 0 Deletion 1 HOMO FN4444-S Chr7 29092730 29092731 0 0 Deletion 1 HOMO LOC_Os07g48596 Myb transcription factor, putative, expressed FN4444-S Chr7 6625206 6625207 0 0 Deletion 1 HOMO FN4444-S Chr7 7448479 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN4444-S Chr8 12687786 G-A 0 0 Single Base Substitution 0 INTRON HET FN4444-S Chr8 14624669 14624669 0 0 Insertion 2 HET FN4444-S Chr8 24481449 24481449 0 0 Insertion 18 HET FN4444-S Chr8 6324894 6324896 0 0 Deletion 2 HOMO FN4444-S Chr9 1109952 1109957 0 0 Deletion 5 HOMO FN4444-S Chr9 16305816 16305817 0 0 Deletion 1 HOMO FN4444-S Chr9 16680725 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4444-S Chr9 16950208 G-A 0 0 Single Base Substitution 0 INTRON HET FN4444-S Chr9 2202998 2202998 0 0 Insertion 80 HET FN4444-S Chr9 22377014 22461339 0 0 Inversion 84326 HET LOC_Os09g38970 zinc finger family protein, putative, expressed FN4444-S Chr9 22377014 22461339 0 0 Inversion 84326 HET LOC_Os09g39130 expressed protein FN4444-S Chr9 5030529 5030606 0 0 Deletion 77 HOMO