FN4455-S Chr1 1106556 1106556 0 0 Insertion 1 HET FN4455-S Chr1 14371180 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os01g25402 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4455-S Chr1 16373511 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr1 19534277 19534278 0 0 Deletion 1 HOMO FN4455-S Chr1 34902377 34902549 0 0 Inversion 173 HET LOC_Os01g60340 NTMC2Type1.1 protein, putative, expressed FN4455-S Chr1 37228803 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g64080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4455-S Chr1 38766484 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr1 42158212 42158213 0 0 Deletion 1 HOMO FN4455-S Chr1 42957774 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4455-S Chr1 4666001 4685000 0 0 Deletion 19000 HET LOC_Os01g09246 glycine-rich protein, putative, expressed FN4455-S Chr1 589355 T-C 0 0 Single Base Substitution 0 INTRON HET FN4455-S Chr1 5931762 A-G 0 0 Single Base Substitution 0 INTRON HET FN4455-S Chr1 6540651 6540654 0 0 Deletion 3 HOMO FN4455-S Chr1 8117322 T-A 0 0 Single Base Substitution 0 INTRON HET FN4455-S Chr10 21828800 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr10 7159754 7159754 0 0 Insertion 2 HET LOC_Os10g12808 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4455-S Chr10 8109301 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr10 8109308 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr11 10628099 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr11 1145132 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4455-S Chr11 13576720 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4455-S Chr11 16655243 16655248 0 0 Deletion 5 HOMO FN4455-S Chr11 17164162 17164165 0 0 Deletion 3 HOMO FN4455-S Chr11 25650243 T-G 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HOMO FN4455-S Chr11 9812976 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4455-S Chr12 13998496 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4455-S Chr12 16307086 16307087 0 0 Deletion 1 HOMO FN4455-S Chr12 18990627 18990627 0 0 Insertion 2 HET FN4455-S Chr12 19319945 C-T 0 0 Single Base Substitution 0 INTRON HET FN4455-S Chr12 26151260 26151261 0 0 Deletion 1 HOMO FN4455-S Chr12 8075404 8075404 0 0 Insertion 2 HET FN4455-S Chr2 12155378 12155379 0 0 Deletion 1 HOMO FN4455-S Chr2 13414290 13414301 0 0 Deletion 11 HOMO FN4455-S Chr2 13457129 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g22570 retrotransposon protein, putative, unclassified, expressed FN4455-S Chr2 17500435 A-C 0 0 Single Base Substitution 0 INTRON HET FN4455-S Chr2 26260275 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr2 31408220 31408220 0 0 Insertion 1 HET FN4455-S Chr2 32407558 T-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4455-S Chr2 32407559 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g52970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4455-S Chr2 32674295 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr2 4468463 4468464 0 0 Deletion 1 HOMO FN4455-S Chr2 9244220 9244220 0 0 Insertion 4 HET FN4455-S Chr2 9875409 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr3 10637413 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4455-S Chr3 14726080 14726278 0 0 Inversion 199 HET FN4455-S Chr3 17334041 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr3 18917965 18917966 0 0 Deletion 1 HOMO FN4455-S Chr3 19063180 G-C 0 0 Single Base Substitution 0 INTRON HET FN4455-S Chr3 23561629 23561629 0 0 Insertion 1 HET FN4455-S Chr3 29966319 29966320 0 0 Deletion 1 HOMO FN4455-S Chr3 30412608 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr3 30434909 30434909 0 0 Insertion 2 HET FN4455-S Chr3 32937915 32937916 0 0 Deletion 1 HOMO FN4455-S Chr3 35435881 35435881 0 0 Insertion 1 HET FN4455-S Chr3 8645334 8645518 0 0 Inversion 185 HET FN4455-S Chr4 12871873 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4455-S Chr4 14369411 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4455-S Chr4 14495633 14495634 0 0 Deletion 1 HOMO FN4455-S Chr4 17209076 17209076 0 0 Insertion 1 HET FN4455-S Chr4 18857907 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr4 25220379 25220441 0 0 Deletion 62 HOMO FN4455-S Chr4 2843144 2843144 0 0 Insertion 2 HET FN4455-S Chr4 29892861 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr4 32542191 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr4 33840511 T-C 0 0 Single Base Substitution 0 INTRON HET FN4455-S Chr5 10754537 10820282 0 0 Inversion 65746 HOMO FN4455-S Chr5 10754542 10820279 0 0 Inversion 65738 HOMO FN4455-S Chr5 14653158 14653158 0 0 Insertion 1 HOMO FN4455-S Chr5 14737874 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4455-S Chr5 17496967 17496968 0 0 Deletion 1 HOMO FN4455-S Chr5 19448616 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4455-S Chr5 22647990 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4455-S Chr5 22647991 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4455-S Chr5 28696161 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN4455-S Chr5 4001220 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g07490 retrotransposon protein, putative, unclassified FN4455-S Chr5 4737052 4737060 0 0 Deletion 8 HOMO FN4455-S Chr5 9715068 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr6 12151612 12151613 0 0 Deletion 1 HOMO LOC_Os06g21030 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4455-S Chr6 22905987 22905987 0 0 Insertion 1 HET FN4455-S Chr6 28495207 28495209 0 0 Deletion 2 HOMO FN4455-S Chr6 29723571 29723573 0 0 Deletion 2 HOMO FN4455-S Chr6 3850197 3850197 0 0 Insertion 1 HET FN4455-S Chr6 5391577 5391582 0 0 Deletion 5 HOMO FN4455-S Chr6 8739357 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4455-S Chr6 9436746 9436755 0 0 Deletion 9 HOMO FN4455-S Chr6 9881824 9881829 0 0 Deletion 5 HOMO LOC_Os06g17040 retrotransposon protein, putative, unclassified, expressed FN4455-S Chr7 10738885 10738886 0 0 Deletion 1 HOMO FN4455-S Chr7 21422251 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr7 6396602 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4455-S Chr7 6460545 6460545 0 0 Insertion 1 HET LOC_Os07g11680 retrotransposon protein, putative, unclassified, expressed FN4455-S Chr8 12962956 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN4455-S Chr8 14086576 14086662 0 0 Deletion 86 HOMO FN4455-S Chr8 15859020 15859020 0 0 Insertion 1 HET FN4455-S Chr8 22515831 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4455-S Chr8 23437205 23437205 0 0 Insertion 1 HOMO FN4455-S Chr8 3808339 T-C 0 0 Single Base Substitution 0 INTRON HET FN4455-S Chr8 6176925 6176958 0 0 Deletion 33 HOMO FN4455-S Chr8 7266096 7266096 0 0 Insertion 2 HET FN4455-S Chr9 13652558 13652559 0 0 Deletion 1 HOMO FN4455-S Chr9 17198216 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g28330 transposon protein, putative, unclassified, expressed FN4455-S Chr9 18576995 18576995 0 0 Insertion 2 HET FN4455-S Chr9 1975058 1975062 0 0 Deletion 4 HOMO FN4455-S Chr9 4011057 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g07890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4455-S Chr9 713017 T-C 0 0 Single Base Substitution 0 INTERGENIC HET