FN4463-S Chr1 14636635 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr1 23686248 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr1 26063515 26063516 0 0 Deletion 1 HOMO LOC_Os01g45880 retrotransposon protein, putative, unclassified, expressed FN4463-S Chr1 27793872 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g48490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4463-S Chr1 28227895 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr1 34070401 34070401 0 0 Insertion 1 HET FN4463-S Chr1 41271825 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g71300 S-formylglutathione hydrolase, putative, expressed FN4463-S Chr10 18220085 18220275 0 0 Inversion 191 HET LOC_Os10g34140 conserved hypothetical protein FN4463-S Chr10 5924660 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr10 7261599 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g13430 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4463-S Chr10 8223978 8223981 0 0 Deletion 3 HOMO FN4463-S Chr10 9023677 9023677 0 0 Insertion 3 HET FN4463-S Chr11 12093571 12093571 0 0 Insertion 20 HET FN4463-S Chr11 12104528 12104531 0 0 Deletion 3 HOMO FN4463-S Chr11 12108413 12108414 0 0 Deletion 1 HOMO FN4463-S Chr11 18745923 T-A 0 0 Single Base Substitution 0 INTRON HET FN4463-S Chr11 23772745 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4463-S Chr11 3795820 3795821 0 0 Deletion 1 HOMO FN4463-S Chr11 7080693 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr11 7907136 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr11 9245966 G-A 0 0 Single Base Substitution 0 INTRON HET FN4463-S Chr12 11689740 11689745 0 0 Deletion 5 HOMO FN4463-S Chr12 218661 218662 0 0 Deletion 1 HOMO FN4463-S Chr12 23183714 23183714 0 0 Insertion 6 HOMO FN4463-S Chr12 8250018 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr12 8680239 8680242 0 0 Deletion 3 HOMO FN4463-S Chr2 15648437 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr2 18494308 18494308 0 0 Insertion 1 HET FN4463-S Chr2 18761118 18761118 0 0 Insertion 1 HET FN4463-S Chr2 20474594 20474594 0 0 Insertion 1 HET FN4463-S Chr2 22974337 T-A 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os02g38020 inorganic phosphate transporter 2-1, chloroplast precursor, putative, expressed FN4463-S Chr2 22974339 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os02g38020 inorganic phosphate transporter 2-1, chloroplast precursor, putative, expressed FN4463-S Chr2 22974342 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os02g38020 inorganic phosphate transporter 2-1, chloroplast precursor, putative, expressed FN4463-S Chr2 23345060 23345060 0 0 Insertion 1 HET FN4463-S Chr2 26722355 26722376 0 0 Deletion 21 HOMO FN4463-S Chr2 33348033 33348033 0 0 Insertion 1 HET FN4463-S Chr2 9964958 9964979 0 0 Deletion 21 HOMO FN4463-S Chr3 17701094 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr3 21038827 21038827 0 0 Insertion 1 HOMO FN4463-S Chr3 26131464 26131470 0 0 Deletion 6 HOMO LOC_Os03g46220 retrotransposon protein, putative, unclassified, expressed FN4463-S Chr3 26900011 26900027 0 0 Deletion 16 HOMO FN4463-S Chr3 27348174 C-T 0 0 Single Base Substitution 0 INTRON HET FN4463-S Chr3 28646840 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4463-S Chr3 4087624 4087624 0 0 Insertion 1 HET FN4463-S Chr3 4932893 4932894 0 0 Deletion 1 HOMO FN4463-S Chr3 5776605 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr3 5776613 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4463-S Chr3 9402730 C-G 0 0 Single Base Substitution 0 START_GAINED HET FN4463-S Chr3 9916943 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g17810 DUF260 domain containing protein, putative, expressed FN4463-S Chr4 10529898 G-A 0 0 Single Base Substitution 0 INTRON HET FN4463-S Chr4 11483185 11483185 0 0 Insertion 2 HET FN4463-S Chr4 14418783 14418783 0 0 Insertion 1 HET FN4463-S Chr4 14976240 14976271 0 0 Deletion 31 HOMO FN4463-S Chr4 21129990 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr4 2564197 2564198 0 0 Deletion 1 HOMO FN4463-S Chr4 26176385 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr4 3080226 3080228 0 0 Deletion 2 HOMO FN4463-S Chr4 8635172 8635174 0 0 Deletion 2 HOMO FN4463-S Chr5 10591073 10591073 0 0 Insertion 1 HET FN4463-S Chr5 15367859 15367860 0 0 Deletion 1 HOMO FN4463-S Chr5 20839914 20839915 0 0 Deletion 1 HOMO LOC_Os05g35100 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4463-S Chr5 21634745 A-C 0 0 Single Base Substitution 0 INTRON HET FN4463-S Chr5 398177 T-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4463-S Chr5 398178 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g01670 retrotransposon protein, putative, unclassified, expressed FN4463-S Chr5 398179 C-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os05g01670 retrotransposon protein, putative, unclassified, expressed FN4463-S Chr5 9904292 9904293 0 0 Deletion 1 HOMO FN4463-S Chr6 12166880 12166880 0 0 Insertion 1 HET FN4463-S Chr6 23029823 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr6 29653116 29653117 0 0 Deletion 1 HOMO FN4463-S Chr6 883657 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr7 11166578 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr7 11962178 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr7 14259012 14259014 0 0 Deletion 2 HOMO FN4463-S Chr7 17256421 17256422 0 0 Deletion 1 HOMO FN4463-S Chr7 18957108 G-A 0 0 Single Base Substitution 0 INTRON HET FN4463-S Chr7 20797490 20797491 0 0 Deletion 1 HOMO FN4463-S Chr7 24794232 24794233 0 0 Deletion 1 HOMO FN4463-S Chr7 26306351 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4463-S Chr7 28727472 A-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os07g48100 CAMK_KIN1/SNF1/Nim1_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN4463-S Chr7 5960930 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g10900 retrotransposon protein, putative, Ty1-copia subclass FN4463-S Chr7 8682406 C-T 0 0 Single Base Substitution 0 INTRON HET FN4463-S Chr7 8961431 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr7 9327097 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4463-S Chr7 9954405 9954405 0 0 Insertion 1 HET FN4463-S Chr8 10790743 10790744 0 0 Deletion 1 HOMO FN4463-S Chr8 5046073 5046076 0 0 Deletion 3 HOMO FN4463-S Chr8 5786945 5786946 0 0 Deletion 1 HOMO FN4463-S Chr9 15670334 15670335 0 0 Deletion 1 HOMO FN4463-S Chr9 2437290 2437291 0 0 Deletion 1 HOMO FN4463-S Chr9 3711240 Chr2 7478966 0 Translocation 0 HET LOC_Os02g07220 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed FN4463-S Chr9 3711240 Chr2 7478966 0 Translocation 0 HET LOC_Os09g07430 retrotransposon, putative, centromere-specific, expressed FN4463-S Chr9 3712509 Chr2 7478990 0 Translocation 0 HET LOC_Os09g07430 retrotransposon, putative, centromere-specific, expressed FN4463-S Chr9 6658819 6658820 0 0 Deletion 1 HOMO