FN447-S Chr1 10708345 10708348 0 0 Deletion 3 FN447-S Chr1 14434734 14434735 0 0 Deletion 1 FN447-S Chr1 16219845 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN447-S Chr1 23041092 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN447-S Chr1 24262283 24262287 0 0 Deletion 4 FN447-S Chr1 28124785 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN447-S Chr1 30303763 30303770 0 0 Deletion 7 FN447-S Chr1 3922934 3922939 0 0 Deletion 5 LOC_Os01g08100 flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed FN447-S Chr10 11248082 A-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN447-S Chr10 1551655 1551660 0 0 Deletion 5 FN447-S Chr10 8318944 8318960 0 0 Deletion 16 FN447-S Chr10 9352156 9352156 0 0 Insertion 2 FN447-S Chr11 8238788 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN447-S Chr12 1273502 C-A 0 0 Single Base Substitution 0 INTRON HET FN447-S Chr12 26728066 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN447-S Chr12 27451266 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN447-S Chr12 9453348 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN447-S Chr2 11722189 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN447-S Chr2 15364171 15655224 0 0 Inversion 291053 LOC_Os02g26160 receptor lectin kinase like protein, putative, expressed FN447-S Chr2 15364171 15655224 0 0 Inversion 291053 LOC_Os02g26660 exonuclease, putative, expressed FN447-S Chr2 15364187 15660534 0 0 Inversion 296347 LOC_Os02g26160 receptor lectin kinase like protein, putative, expressed FN447-S Chr2 15364187 15660534 0 0 Inversion 296347 LOC_Os02g26670 F-box/Kelch-repeat protein, putative, expressed FN447-S Chr2 15387001 15439000 0 0 Deletion 52000 LOC_Os02g26190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN447-S Chr2 15387001 15439000 0 0 Deletion 52000 LOC_Os02g26200 expressed protein FN447-S Chr2 15387001 15439000 0 0 Deletion 52000 LOC_Os02g26210 flowering promoting factor-like 1, putative, expressed FN447-S Chr2 15387001 15439000 0 0 Deletion 52000 LOC_Os02g26220 hypothetical protein FN447-S Chr2 15387001 15439000 0 0 Deletion 52000 LOC_Os02g26230 retrotransposon protein, putative, unclassified, expressed FN447-S Chr2 15387001 15439000 0 0 Deletion 52000 LOC_Os02g26240 retrotransposon protein, putative, unclassified, expressed FN447-S Chr2 15387001 15439000 0 0 Deletion 52000 LOC_Os02g26250 retrotransposon protein, putative, unclassified FN447-S Chr2 15387001 15439000 0 0 Deletion 52000 LOC_Os02g26260 expressed protein FN447-S Chr2 15387001 15439000 0 0 Deletion 52000 LOC_Os02g26270 retrotransposon protein, putative, unclassified, expressed FN447-S Chr2 15387001 15439000 0 0 Deletion 52000 LOC_Os02g26280 retrotransposon protein, putative, unclassified, expressed FN447-S Chr2 15387001 15439000 0 0 Deletion 52000 LOC_Os02g26290 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed FN447-S Chr2 16850263 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g28490 expressed protein FN447-S Chr2 20282309 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN447-S Chr2 29739202 C-T 0 0 Single Base Substitution 0 INTRON HET FN447-S Chr2 7974871 7974884 0 0 Deletion 13 FN447-S Chr2 8054030 8054038 0 0 Deletion 8 FN447-S Chr3 15766211 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g27480 OsSCP14 - Putative Serine Carboxypeptidase homologue, expressed FN447-S Chr3 16794911 16794931 0 0 Deletion 20 FN447-S Chr3 18523917 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN447-S Chr3 26250447 26250452 0 0 Deletion 5 FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g55980 expressed protein FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g55990 homeobox domain containing protein, expressed FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56000 PHLOEM 2-LIKE A10, putative, expressed FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56010 bZIP transcription factor domain containing protein, expressed FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56020 RNA recognition motif containing protein, putative, expressed FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56030 expressed protein FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56040 retrotransposon protein, putative, unclassified, expressed FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56050 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56060 CSLC9 - cellulose synthase-like family C, expressed FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56070 expressed protein FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56080 hypothetical protein FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56090 MYB family transcription factor, putative, expressed FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56100 expressed protein FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56110 homeobox protein knotted-1, putative, expressed FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56120 expressed protein FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56130 lichenase-2 precursor, putative, expressed FN447-S Chr3 31867001 32000000 0 0 Deletion 133000 LOC_Os03g56140 homeobox protein rough sheath 1, putative, expressed FN447-S Chr3 34449139 34449148 0 0 Deletion 9 LOC_Os03g60620 DnaK family protein, putative, expressed FN447-S Chr3 34628095 34628096 0 0 Deletion 1 FN447-S Chr3 3875500 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN447-S Chr3 5918248 5918248 0 0 Insertion 1 FN447-S Chr3 9254912 9254913 0 0 Deletion 1 FN447-S Chr4 13912052 13912052 0 0 Insertion 3 FN447-S Chr4 1440954 1440976 0 0 Deletion 22 FN447-S Chr4 14634311 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN447-S Chr4 15187214 15187233 0 0 Deletion 19 FN447-S Chr4 155877 158418 0 0 Deletion 2541 FN447-S Chr4 26741628 26741629 0 0 Deletion 1 FN447-S Chr4 2750379 3931265 0 0 Inversion 1180886 LOC_Os04g05460 expressed protein FN447-S Chr4 2750379 3931265 0 0 Inversion 1180886 LOC_Os04g07380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN447-S Chr4 32523044 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN447-S Chr4 34890346 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN447-S Chr4 34974702 34974707 0 0 Deletion 5 FN447-S Chr4 7829992 7829996 0 0 Deletion 4 FN447-S Chr5 15954542 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN447-S Chr5 17045226 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN447-S Chr5 17754549 18183246 0 0 Inversion 428697 FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31070 retrotransposon protein, putative, unclassified, expressed FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31080 expressed protein FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31090 expressed protein FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31100 latency associated nuclear antigen, putative, expressed FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31110 hexokinase, putative, expressed FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31120 retrotransposon protein, putative, unclassified, expressed FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31130 retrotransposon protein, putative, unclassified, expressed FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31140 glycosyl hydrolases family 17, putative, expressed FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31160 peptide chain release factor 2, putative, expressed FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31170 chloroplast nucleoid DNA binding protein, putative, expressed FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31180 hypothetical protein FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31200 retrotransposon protein, putative, unclassified, expressed FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31210 retrotransposon protein, putative, unclassified, expressed FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31220 cell division control protein 48 homolog B, putative, expressed FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31230 N-acetyltransferase ESCO1, putative, expressed FN447-S Chr5 18058001 18172000 0 0 Deletion 114000 LOC_Os05g31254 acetyltransferase, GNAT family, putative, expressed FN447-S Chr5 18171757 Chr2 8687646 0 Translocation 0 LOC_Os05g31254 acetyltransferase, GNAT family, putative, expressed FN447-S Chr5 18183243 Chr2 8687621 0 Translocation 0 FN447-S Chr5 18601680 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g31930 retrotransposon protein, putative, unclassified, expressed FN447-S Chr5 7054396 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN447-S Chr5 831594 A-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os05g02440 expressed protein FN447-S Chr6 1374997 1374998 0 0 Deletion 1 LOC_Os06g03560 oligopeptide transporter, putative, expressed FN447-S Chr6 26397441 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN447-S Chr6 27950049 27950051 0 0 Deletion 2 LOC_Os06g46110 expressed protein FN447-S Chr6 29354187 29478757 0 0 Inversion 124570 LOC_Os06g48520 disease resistance protein RPM1, putative, expressed FN447-S Chr6 29354187 29478757 0 0 Inversion 124570 LOC_Os06g48720 cadmium/zinc-transporting ATPase 4, putative, expressed FN447-S Chr6 29354203 29478758 0 0 Inversion 124555 LOC_Os06g48520 disease resistance protein RPM1, putative, expressed FN447-S Chr6 29354203 29478758 0 0 Inversion 124555 LOC_Os06g48720 cadmium/zinc-transporting ATPase 4, putative, expressed FN447-S Chr6 30487174 Chr3 23511718 0 Translocation 0 FN447-S Chr7 22932545 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN447-S Chr7 25407199 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN447-S Chr7 28506687 28506698 0 0 Deletion 11 FN447-S Chr7 3289159 3289173 0 0 Deletion 14 FN447-S Chr8 17086093 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN447-S Chr8 17692042 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g28930 retrotransposon protein, putative, unclassified, expressed FN447-S Chr8 2625619 2625620 0 0 Deletion 1 FN447-S Chr8 26530008 26530008 0 0 Insertion 1 FN447-S Chr8 7943333 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g13350 expressed protein FN447-S Chr9 1073942 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN447-S Chr9 1073943 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN447-S Chr9 11948590 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN447-S Chr9 4223122 4223123 0 0 Deletion 1