FN448-S Chr1 10096090 12751944 0 0 Inversion 2655854 LOC_Os01g18040 retrotransposon protein, putative, unclassified, expressed FN448-S Chr1 10096090 12751944 0 0 Inversion 2655854 LOC_Os01g22680 fruit bromelain precursor, putative, expressed FN448-S Chr1 11768578 11768578 0 0 Insertion 2 FN448-S Chr1 18080199 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN448-S Chr1 2961170 2961170 0 0 Insertion 6 FN448-S Chr1 30600695 30600695 0 0 Insertion 1 FN448-S Chr1 33427139 33427140 0 0 Deletion 1 FN448-S Chr1 41818266 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN448-S Chr1 41818270 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN448-S Chr1 435858 435859 0 0 Deletion 1 FN448-S Chr1 9587034 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN448-S Chr11 1096912 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr11 11933705 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr11 11970684 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr11 20699516 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN448-S Chr11 20987461 20987462 0 0 Deletion 1 FN448-S Chr11 21712681 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr11 22418926 22432951 0 0 Inversion 14025 LOC_Os11g37860 stripe rust resistance protein Yr10, putative, expressed FN448-S Chr11 22418941 22433094 0 0 Inversion 14153 LOC_Os11g37860 stripe rust resistance protein Yr10, putative, expressed FN448-S Chr11 23805056 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr11 4097385 4097386 0 0 Deletion 1 FN448-S Chr11 9923879 11885986 0 0 Inversion 1962107 LOC_Os11g20510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN448-S Chr12 1519697 1519698 0 0 Deletion 1 FN448-S Chr12 26102732 A-C 0 0 Single Base Substitution 0 INTRON HET FN448-S Chr12 27049993 Chr6 6604775 0 Translocation 0 FN448-S Chr12 4820787 Chr9 18095067 0 Translocation 0 FN448-S Chr2 15412838 15412839 0 0 Deletion 1 FN448-S Chr2 18031443 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr2 18039674 18039675 0 0 Deletion 1 LOC_Os02g30310 ThiF family domain containing protein, putative, expressed FN448-S Chr2 25648686 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr2 34931316 35216202 0 0 Inversion 284886 LOC_Os02g57040 dehydrogenase, putative, expressed FN448-S Chr3 10902804 Chr1 34373526 0 Translocation 0 FN448-S Chr3 22934264 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN448-S Chr3 2599867 T-C 0 0 Single Base Substitution 0 INTRON HET FN448-S Chr3 28661597 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr3 30873413 30873416 0 0 Deletion 3 FN448-S Chr4 15080017 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr4 1567057 1567062 0 0 Deletion 5 FN448-S Chr4 16774309 16774329 0 0 Deletion 20 FN448-S Chr4 19376735 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g32320 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed FN448-S Chr4 20053402 20053418 0 0 Deletion 16 LOC_Os04g33120 retrotransposon protein, putative, unclassified, expressed FN448-S Chr4 20154698 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr4 23439474 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr4 28330131 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN448-S Chr5 19468513 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr5 19655267 19655268 0 0 Deletion 1 FN448-S Chr5 20378428 20378432 0 0 Deletion 4 FN448-S Chr5 27051169 27051169 0 0 Insertion 1 FN448-S Chr6 11497493 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr6 13187539 A-G 0 0 Single Base Substitution 0 INTRON HET FN448-S Chr6 13856540 T-G 0 0 Single Base Substitution 0 INTRON HOMO FN448-S Chr6 1657679 1657687 0 0 Deletion 8 FN448-S Chr6 29088630 T-A 0 0 Single Base Substitution 0 INTRON HET FN448-S Chr6 6325966 6325966 0 0 Insertion 6 FN448-S Chr6 9363287 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr7 13034255 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN448-S Chr7 15144770 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os07g26350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN448-S Chr7 19390031 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN448-S Chr7 21189219 Chr4 13727661 0 Translocation 0 FN448-S Chr7 22054665 22054665 0 0 Insertion 2 FN448-S Chr7 26203582 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN448-S Chr7 5048173 Chr3 19437692 0 Translocation 0 FN448-S Chr7 8073404 8076332 0 0 Deletion 2928 LOC_Os07g14150 cytidine deaminase, putative, expressed FN448-S Chr8 13757954 G-T 0 0 Single Base Substitution 0 INTRON HET FN448-S Chr8 20315618 20315618 0 0 Insertion 10 FN448-S Chr8 22933499 22933523 0 0 Deletion 24 FN448-S Chr8 24052159 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g37970 MYB family transcription factor, putative, expressed FN448-S Chr9 11300763 11300775 0 0 Deletion 12 FN448-S Chr9 14561129 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN448-S Chr9 18221515 18221516 0 0 Deletion 1 FN448-S Chr9 4856668 A-G 0 0 Single Base Substitution 0 INTERGENIC HET