FN4481-S Chr1 13732839 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4481-S Chr1 14984857 14984862 0 0 Deletion 5 HOMO LOC_Os01g26400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4481-S Chr1 20580567 20580648 0 0 Deletion 81 HOMO FN4481-S Chr1 21100125 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4481-S Chr1 31507863 31507869 0 0 Deletion 6 HOMO FN4481-S Chr1 39214415 39214416 0 0 Deletion 1 HOMO FN4481-S Chr1 39480859 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4481-S Chr1 39816815 C-T 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN4481-S Chr1 4187174 4187175 0 0 Deletion 1 HOMO FN4481-S Chr1 4664582 4664583 0 0 Deletion 1 HOMO FN4481-S Chr1 5212725 T-C 0 0 Single Base Substitution 0 INTRON HET FN4481-S Chr1 5431653 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4481-S Chr1 6056431 6056432 0 0 Deletion 1 HOMO FN4481-S Chr10 13088473 13088473 0 0 Insertion 1 HET FN4481-S Chr10 16125432 16667635 0 0 Inversion 542204 HET LOC_Os10g30910 transmembrane protein-related, putative, expressed FN4481-S Chr10 16767995 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN4481-S Chr10 18999791 18999793 0 0 Deletion 2 HOMO FN4481-S Chr10 19276578 C-A 0 0 Single Base Substitution 0 INTRON HET FN4481-S Chr11 1413459 G-T 0 0 Single Base Substitution 0 INTRON HET FN4481-S Chr11 16028557 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g27850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4481-S Chr11 22372030 22372035 0 0 Deletion 5 HOMO FN4481-S Chr11 26024241 26024258 0 0 Deletion 17 HOMO FN4481-S Chr11 27030543 27030544 0 0 Deletion 1 HOMO FN4481-S Chr11 9896224 9896286 0 0 Deletion 62 HOMO FN4481-S Chr11 9993606 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os11g17850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4481-S Chr12 13524521 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4481-S Chr12 14133670 14133703 0 0 Deletion 33 HOMO LOC_Os12g24680 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4481-S Chr12 15198987 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4481-S Chr12 15706385 15706385 0 0 Insertion 1 HET FN4481-S Chr12 16995780 16995781 0 0 Deletion 1 HOMO FN4481-S Chr12 17680373 17680373 0 0 Insertion 42 HET FN4481-S Chr12 20711488 20711488 0 0 Insertion 2 HET FN4481-S Chr12 23217879 23217880 0 0 Deletion 1 HOMO FN4481-S Chr12 2634355 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4481-S Chr12 2634356 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4481-S Chr12 3489122 3489123 0 0 Deletion 1 HOMO FN4481-S Chr12 3995526 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4481-S Chr12 4133019 4133031 0 0 Deletion 12 HOMO LOC_Os12g08110 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4481-S Chr12 4233833 4233835 0 0 Deletion 2 HOMO FN4481-S Chr12 7957828 7957842 0 0 Deletion 14 HOMO FN4481-S Chr12 8406212 T-C 0 0 Single Base Substitution 0 INTRON HET FN4481-S Chr2 14163763 14163958 0 0 Inversion 196 HET LOC_Os02g24430 expressed protein FN4481-S Chr2 15666353 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4481-S Chr2 16230649 16230649 0 0 Insertion 1 HET FN4481-S Chr2 25127717 25127734 0 0 Deletion 17 HOMO FN4481-S Chr3 21722245 21722246 0 0 Deletion 1 HOMO FN4481-S Chr3 22258776 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4481-S Chr3 33116158 33116158 0 0 Insertion 4 HET FN4481-S Chr3 5905328 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4481-S Chr4 15282126 15282129 0 0 Deletion 3 HOMO FN4481-S Chr4 16269173 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g27520 retrotransposon protein, putative, unclassified, expressed FN4481-S Chr4 21054090 21054090 0 0 Insertion 2 HET FN4481-S Chr4 21745291 21745295 0 0 Deletion 4 HOMO FN4481-S Chr4 26992106 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4481-S Chr4 2710371 2710373 0 0 Deletion 2 HOMO FN4481-S Chr4 32604522 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4481-S Chr4 4579776 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4481-S Chr5 14828528 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4481-S Chr5 15812061 15812062 0 0 Deletion 1 HOMO LOC_Os05g27180 ligA, putative, expressed FN4481-S Chr5 26553793 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4481-S Chr5 556778 Chr2 34015809 0 Translocation 0 HET FN4481-S Chr5 6539473 6539474 0 0 Deletion 1 HOMO FN4481-S Chr6 1107683 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4481-S Chr6 14261124 14261124 0 0 Insertion 5 HET FN4481-S Chr6 14526663 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4481-S Chr6 17472425 17472583 0 0 Inversion 159 HET FN4481-S Chr6 18938655 18938658 0 0 Deletion 3 HOMO FN4481-S Chr6 20416124 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4481-S Chr6 30254113 30254114 0 0 Deletion 1 HOMO LOC_Os06g49960 retrotransposon protein, putative, unclassified, expressed FN4481-S Chr6 8811972 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g15540 retrotransposon protein, putative, unclassified, expressed FN4481-S Chr7 1070125 T-C 0 0 Single Base Substitution 0 INTRON HET FN4481-S Chr7 11679430 G-T 0 0 Single Base Substitution 0 INTRON HET FN4481-S Chr7 15633013 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4481-S Chr7 25847373 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4481-S Chr7 27838357 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4481-S Chr7 3071151 3071151 0 0 Insertion 42 HET FN4481-S Chr7 4004488 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4481-S Chr8 11879326 12323915 0 0 Inversion 444590 HET FN4481-S Chr8 12320185 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22054 retrotransposon protein, putative, unclassified, expressed FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22080 retrotransposon, putative, centromere-specific FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22130 retrotransposon, putative, centromere-specific, expressed FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22149 CBS domain containing membrane protein, putative, expressed FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22170 expressed protein FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22190 expressed protein FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22200 expressed protein FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22210 retrotransposon protein, putative, unclassified FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22250 expressed protein FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22270 retrotransposon protein, putative, Ty3-gypsy subclass FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22284 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22300 retrotransposon, putative, centromere-specific FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22310 retrotransposon protein, putative, unclassified, expressed FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22320 retrotransposon protein, putative, unclassified, expressed FN4481-S Chr8 13313001 13462000 0 0 Deletion 149000 HET LOC_Os08g22330 retrotransposon protein, putative, unclassified, expressed FN4481-S Chr8 20414080 G-A 0 0 Single Base Substitution 0 INTRON HET FN4481-S Chr8 20583970 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4481-S Chr8 20855629 21078802 0 0 Inversion 223174 HET LOC_Os08g33430 formin, putative, expressed FN4481-S Chr8 20855644 21078814 0 0 Inversion 223171 HET LOC_Os08g33430 formin, putative, expressed FN4481-S Chr8 21000001 21055000 0 0 Deletion 55000 HET LOC_Os08g33630 uncharacterized protein family UPF0016 domain containing protein, expressed FN4481-S Chr8 21000001 21055000 0 0 Deletion 55000 HET LOC_Os08g33640 expressed protein FN4481-S Chr8 21000001 21055000 0 0 Deletion 55000 HET LOC_Os08g33650 SET domain-containing protein, putative, expressed FN4481-S Chr8 21000001 21055000 0 0 Deletion 55000 HET LOC_Os08g33660 MYB family transcription factor, putative, expressed FN4481-S Chr8 21000001 21055000 0 0 Deletion 55000 HET LOC_Os08g33670 no apical meristem protein, putative, expressed FN4481-S Chr8 21000001 21055000 0 0 Deletion 55000 HET LOC_Os08g33680 YGL010w, putative, expressed FN4481-S Chr8 21000001 21055000 0 0 Deletion 55000 HET LOC_Os08g33690 expressed protein FN4481-S Chr8 21000001 21055000 0 0 Deletion 55000 HET LOC_Os08g33700 pentatricopeptide, putative, expressed FN4481-S Chr8 21000001 21055000 0 0 Deletion 55000 HET LOC_Os08g33710 ribonuclease T2 family domain containing protein, expressed FN4481-S Chr8 21000001 21055000 0 0 Deletion 55000 HET LOC_Os08g33720 lactate/malate dehydrogenase, putative, expressed FN4481-S Chr8 27210934 27210935 0 0 Deletion 1 HOMO FN4481-S Chr8 28207264 28207269 0 0 Deletion 5 HOMO FN4481-S Chr8 6385390 6385390 0 0 Insertion 1 HET FN4481-S Chr8 8015298 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4481-S Chr8 8740457 8740460 0 0 Deletion 3 HOMO FN4481-S Chr9 15316200 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4481-S Chr9 16546335 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN4481-S Chr9 18313695 18313695 0 0 Insertion 18 HET FN4481-S Chr9 661415 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4481-S Chr9 9626785 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g15750 proteasome/cyclosome repeat containing protein, expressed