FN4545-S Chr1 10884004 10884006 0 0 Deletion 2 HOMO FN4545-S Chr1 10965276 10965277 0 0 Deletion 1 HOMO LOC_Os01g19380 pentatricopeptide, putative, expressed FN4545-S Chr1 12473482 12473483 0 0 Deletion 1 HOMO FN4545-S Chr1 22046291 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g39190 retrotransposon protein, putative, unclassified, expressed FN4545-S Chr1 296547 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr1 296548 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr1 37697946 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN4545-S Chr1 3784093 3784094 0 0 Deletion 1 HOMO LOC_Os01g07860 retrotransposon protein, putative, unclassified, expressed FN4545-S Chr1 40741130 40741284 0 0 Inversion 155 HET LOC_Os01g70330 prefoldin subunit family protein, expressed FN4545-S Chr1 42224612 42224613 0 0 Deletion 1 HOMO FN4545-S Chr1 6555449 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr10 14037576 14037579 0 0 Deletion 3 HOMO FN4545-S Chr10 15059864 15059864 0 0 Insertion 2 HET FN4545-S Chr10 170814 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g01260 retrotransposon protein, putative, unclassified, expressed FN4545-S Chr10 1890395 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN4545-S Chr10 7796689 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr10 7851291 7851292 0 0 Deletion 1 HOMO FN4545-S Chr11 26893782 26893782 0 0 Insertion 4 HET FN4545-S Chr12 15725335 15725335 0 0 Insertion 1 HET FN4545-S Chr12 16229001 16269000 0 0 Deletion 40000 HET LOC_Os12g27580 retrotransposon protein, putative, unclassified, expressed FN4545-S Chr12 16229001 16269000 0 0 Deletion 40000 HET LOC_Os12g27590 retrotransposon protein, putative, unclassified, expressed FN4545-S Chr12 16229001 16269000 0 0 Deletion 40000 HET LOC_Os12g27600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4545-S Chr12 16229001 16269000 0 0 Deletion 40000 HET LOC_Os12g27610 retrotransposon protein, putative, unclassified, expressed FN4545-S Chr12 16229001 16269000 0 0 Deletion 40000 HET LOC_Os12g27630 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27640 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27650 hypothetical protein FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27670 tetratricopeptide TPR_4, putative, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27680 retrotransposon, putative, centromere-specific, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27690 expressed protein FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27720 hypothetical protein FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27730 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27740 expressed protein FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27750 OsFBX441 - F-box domain containing protein, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27760 OsFBX442 - F-box domain containing protein, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27770 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27780 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27790 OsFBX443 - F-box domain containing protein, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27800 retrotransposon protein, putative, unclassified, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27810 OsFBX444 - F-box domain containing protein, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27820 hypothetical protein FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27830 dehydrogenase/reductase, putative, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27840 expressed protein FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27850 LGC1, putative, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27860 retrotransposon protein, putative, unclassified, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4545-S Chr12 16273001 16439000 0 0 Deletion 166000 HET LOC_Os12g27880 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g27900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g27910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g27920 expressed protein FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g27930 expressed protein FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g27940 expressed protein FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g27950 expressed protein FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g27960 expressed protein FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g27980 transposon protein, putative, unclassified, expressed FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g27994 expressed protein FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g28010 hypothetical protein FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g28015 expressed protein FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g28020 hypothetical protein FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g28040 NBS-LRR disease resistance protein, putative, expressed FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g28050 NBS-LRR disease resistance protein, putative, expressed FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g28065 expressed protein FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g28070 NBS-LRR disease resistance protein, putative, expressed FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g28080 expressed protein FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g28090 expressed protein FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g28100 NBS-LRR disease resistance protein, putative, expressed FN4545-S Chr12 16447001 16603000 0 0 Deletion 156000 HET LOC_Os12g28110 expressed protein FN4545-S Chr12 16650001 16718000 0 0 Deletion 68000 HET LOC_Os12g28200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4545-S Chr12 16650001 16718000 0 0 Deletion 68000 HET LOC_Os12g28210 retrotransposon, putative, centromere-specific FN4545-S Chr12 16650001 16718000 0 0 Deletion 68000 HET LOC_Os12g28220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4545-S Chr12 16650001 16718000 0 0 Deletion 68000 HET LOC_Os12g28230 retrotransposon protein, putative, Ty3-gypsy subclass FN4545-S Chr12 16650001 16718000 0 0 Deletion 68000 HET LOC_Os12g28240 retrotransposon protein, putative, unclassified, expressed FN4545-S Chr12 16650001 16718000 0 0 Deletion 68000 HET LOC_Os12g28250 disease resistance protein RPM1, putative, expressed FN4545-S Chr12 16650001 16718000 0 0 Deletion 68000 HET LOC_Os12g28260 cyclic nucleotide-gated ion channel, putative, expressed FN4545-S Chr12 16650001 16718000 0 0 Deletion 68000 HET LOC_Os12g28270 amidohydrolase, putative, expressed FN4545-S Chr12 21917031 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr12 5601415 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr2 10102526 G-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os02g17550 transposon protein, putative, unclassified, expressed FN4545-S Chr2 11008110 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4545-S Chr2 12673635 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr2 15965125 A-G 0 0 Single Base Substitution 0 INTRON HET FN4545-S Chr2 16603861 16603861 0 0 Insertion 30 HET FN4545-S Chr2 20646139 20646139 0 0 Insertion 1 HET FN4545-S Chr2 20863338 20863338 0 0 Insertion 1 HET FN4545-S Chr2 2302902 2302902 0 0 Insertion 2 HET FN4545-S Chr2 23445168 23445171 0 0 Deletion 3 HOMO FN4545-S Chr2 24447641 24447661 0 0 Deletion 20 HOMO FN4545-S Chr2 25855244 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4545-S Chr2 26212524 26212539 0 0 Deletion 15 HOMO LOC_Os02g43430 protein kinase domain containing protein, expressed FN4545-S Chr2 26228986 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr2 27127344 27127509 0 0 Inversion 166 HET FN4545-S Chr2 9469851 9469860 0 0 Deletion 9 HOMO FN4545-S Chr3 11796980 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr3 14713910 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr3 31079944 31079944 0 0 Insertion 1 HET FN4545-S Chr4 25821494 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4545-S Chr4 26843121 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4545-S Chr4 27183124 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr4 29264682 29264684 0 0 Deletion 2 HOMO FN4545-S Chr4 4187104 4187108 0 0 Deletion 4 HOMO FN4545-S Chr4 8438412 8438414 0 0 Deletion 2 HOMO FN4545-S Chr5 12136299 12136301 0 0 Deletion 2 HOMO FN4545-S Chr5 13084369 13084370 0 0 Deletion 1 HOMO FN4545-S Chr5 13503610 13503615 0 0 Deletion 5 HOMO FN4545-S Chr5 17434897 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4545-S Chr5 24112106 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN4545-S Chr5 2415907 2415907 0 0 Insertion 1 HET FN4545-S Chr5 2543839 2544048 0 0 Inversion 210 HET FN4545-S Chr5 29356452 29356459 0 0 Deletion 7 HOMO FN4545-S Chr5 29375624 29375624 0 0 Insertion 1 HET FN4545-S Chr5 3018536 3018536 0 0 Insertion 1 HET FN4545-S Chr6 15824475 15824479 0 0 Deletion 4 HOMO FN4545-S Chr6 17625422 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr6 18231864 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4545-S Chr6 28755479 28755480 0 0 Deletion 1 HOMO FN4545-S Chr6 4901032 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr6 725413 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g02260 callose synthase, putative, expressed FN4545-S Chr6 8656154 8656154 0 0 Insertion 15 HET FN4545-S Chr7 11237081 11237222 0 0 Inversion 142 HET FN4545-S Chr7 14787853 14787854 0 0 Deletion 1 HOMO FN4545-S Chr7 22012956 22012957 0 0 Deletion 1 HOMO FN4545-S Chr7 22157258 22157262 0 0 Deletion 4 HOMO FN4545-S Chr7 223685 223685 0 0 Insertion 1 HET FN4545-S Chr7 27387585 27387585 0 0 Insertion 1 HET FN4545-S Chr7 2858565 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr7 4948604 4948605 0 0 Deletion 1 HOMO FN4545-S Chr7 9910144 9910144 0 0 Insertion 1 HET FN4545-S Chr8 15323845 T-A 0 0 Single Base Substitution 0 INTRON HET FN4545-S Chr8 16718232 Chr4 2584620 0 Translocation 0 HET FN4545-S Chr8 3708670 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g06570 retrotransposon protein, putative, unclassified, expressed FN4545-S Chr8 6898529 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4545-S Chr9 19291621 19291621 0 0 Insertion 1 HET FN4545-S Chr9 2960840 2960842 0 0 Deletion 2 HOMO