FN455-S Chr1 24099431 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN455-S Chr1 29065033 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN455-S Chr10 17804720 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN455-S Chr11 14940458 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os11g26110 retrotransposon protein, putative, unclassified, expressed FN455-S Chr11 15882916 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN455-S Chr11 17831566 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN455-S Chr11 17831567 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN455-S Chr11 17831569 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN455-S Chr11 18644782 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN455-S Chr11 18644787 A-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN455-S Chr11 26671416 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN455-S Chr11 2727298 2727307 0 0 Deletion 9 FN455-S Chr12 1172224 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN455-S Chr12 17649680 Chr5 1672312 0 Translocation 0 FN455-S Chr12 17649690 Chr1 13609445 0 Translocation 0 FN455-S Chr12 17653662 Chr1 13609434 0 Translocation 0 FN455-S Chr12 17653665 17668872 0 0 Inversion 15207 LOC_Os12g29620 plant protein of unknown function domain containing protein, expressed FN455-S Chr12 1812077 1812080 0 0 Deletion 3 FN455-S Chr12 20859847 Chr5 1670730 0 Translocation 0 FN455-S Chr12 22489365 22489366 0 0 Deletion 1 LOC_Os12g36720 RGH1A, putative, expressed FN455-S Chr12 24883660 Chr11 6038608 0 Translocation 0 LOC_Os12g40200 expressed protein FN455-S Chr12 2982688 2982690 0 0 Deletion 2 FN455-S Chr2 22318420 22318447 0 0 Deletion 27 FN455-S Chr2 25268203 25268204 0 0 Deletion 1 FN455-S Chr2 34055110 34055112 0 0 Deletion 2 FN455-S Chr2 9259915 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g16270 xa1, putative, expressed FN455-S Chr3 15471112 15887955 0 0 Inversion 416843 LOC_Os03g27019 expressed protein FN455-S Chr3 15471112 15887955 0 0 Inversion 416843 LOC_Os03g27710 retrotransposon protein, putative, unclassified, expressed FN455-S Chr3 15471150 15887958 0 0 Inversion 416808 LOC_Os03g27019 expressed protein FN455-S Chr3 15471150 15887958 0 0 Inversion 416808 LOC_Os03g27710 retrotransposon protein, putative, unclassified, expressed FN455-S Chr3 18489721 18489726 0 0 Deletion 5 FN455-S Chr3 26096743 26096747 0 0 Deletion 4 LOC_Os03g46150 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN455-S Chr3 26476482 26476485 0 0 Deletion 3 LOC_Os03g46820 spidroin-1, putative, expressed FN455-S Chr3 35794247 35794250 0 0 Deletion 3 LOC_Os03g63330 aspartokinase, chloroplast precursor, putative, expressed FN455-S Chr4 27919001 27939000 0 0 Deletion 20000 LOC_Os04g47059 TRANSPARENT TESTA 8, putative, expressed FN455-S Chr4 29453679 29453684 0 0 Deletion 5 FN455-S Chr4 33685799 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN455-S Chr5 1670706 1672344 0 0 Deletion 1638 FN455-S Chr5 21720655 22027002 0 0 Inversion 306347 LOC_Os05g37170 transcription factor, putative, expressed FN455-S Chr5 21720667 22027027 0 0 Inversion 306360 LOC_Os05g37170 transcription factor, putative, expressed FN455-S Chr5 29527434 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN455-S Chr5 29579052 Chr2 950601 0 Translocation 0 LOC_Os05g51570 vacuolar-processing enzyme precursor, putative, expressed FN455-S Chr5 29579056 Chr2 950612 0 Translocation 0 LOC_Os05g51570 vacuolar-processing enzyme precursor, putative, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17440 transposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17450 retrotransposon protein, putative, Ty3-gypsy subclass FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17460 retrotransposon protein, putative, Ty3-gypsy subclass FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17490 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17500 retrotransposon protein, putative, Ty3-gypsy subclass FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17510 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17520 retrotransposon protein, putative, Ty3-gypsy subclass FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17530 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17540 retrotransposon protein, putative, unclassified, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17550 retrotransposon protein, putative, unclassified, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17560 retrotransposon protein, putative, Ty3-gypsy subclass FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17580 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17590 retrotransposon protein, putative, unclassified, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17604 SHR5-receptor-like kinase, putative, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17640 retrotransposon protein, putative, unclassified, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17650 retrotransposon protein, putative, unclassified, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17670 retrotransposon protein, putative, Ty1-copia subclass FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17680 conserved hypothetical protein FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17690 expressed protein FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17700 retrotransposon protein, putative, unclassified, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17710 hypothetical protein FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17720 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17730 expressed protein FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17740 retrotransposon protein, putative, unclassified, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17750 retrotransposon protein, putative, Ty1-copia subclass FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17760 retrotransposon protein, putative, Ty3-gypsy subclass FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17790 retrotransposon protein, putative, Ty3-gypsy subclass FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17800 SHR5-receptor-like kinase, putative, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17810 SHR5-receptor-like kinase, putative, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17820 retrotransposon protein, putative, Ty3-gypsy subclass FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17830 retrotransposon protein, putative, unclassified, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17849 expressed protein FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17860 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17870 retrotransposon protein, putative, unclassified, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17880 retrotransposon protein, putative, unclassified, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17890 retrotransposon protein, putative, unclassified, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17900 retrotransposon protein, putative, unclassified, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17920 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17930 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17940 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17950 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17970 retrotransposon protein, putative, unclassified, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17980 retrotransposon protein, putative, unclassified, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g17990 expressed protein FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18000 retrotransposon protein, putative, LINE subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18010 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18020 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18030 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18050 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18060 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18080 retrotransposon protein, putative, Ty3-gypsy subclass FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18090 SHR5-receptor-like kinase, putative, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18120 expressed protein FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18130 expressed protein FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18140 retrotransposon, putative, centromere-specific FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18150 expressed protein FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18160 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18170 retrotransposon, putative, centromere-specific, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18180 retrotransposon, putative, centromere-specific, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18220 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18250 retrotransposon, putative, centromere-specific FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18260 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18270 retrotransposon protein, putative, unclassified FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18274 expressed protein FN455-S Chr5 9987001 10536000 0 0 Deletion 549000 LOC_Os05g18280 kelch domain containing protein, putative, expressed FN455-S Chr6 11274930 11280837 0 0 Deletion 5907 LOC_Os06g19730 HEAT repeat family protein, putative, expressed FN455-S Chr6 11608234 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN455-S Chr6 26847322 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN455-S Chr7 13174663 13174664 0 0 Deletion 1 LOC_Os07g23370 retrotransposon protein, putative, unclassified, expressed FN455-S Chr7 13502512 Chr2 12182820 0 Translocation 0 FN455-S Chr7 16829180 16829181 0 0 Deletion 1 LOC_Os07g28750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN455-S Chr7 3144956 3367115 0 0 Inversion 222159 LOC_Os07g06890 FAD-linked oxidoreductase protein, putative, expressed FN455-S Chr8 10083437 10083452 0 0 Deletion 15 FN455-S Chr8 11382504 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN455-S Chr8 140695 172284 0 0 Deletion 31589 LOC_Os08g01200 retrotransposon protein, putative, unclassified, expressed FN455-S Chr8 140695 172284 0 0 Deletion 31589 LOC_Os08g01210 harpin-induced protein 1 domain containing protein, expressed FN455-S Chr8 140695 172284 0 0 Deletion 31589 LOC_Os08g01220 harpin-induced protein 1 domain containing protein, expressed FN455-S Chr8 140695 172284 0 0 Deletion 31589 LOC_Os08g01230 hypothetical protein FN455-S Chr8 140695 172284 0 0 Deletion 31589 LOC_Os08g01240 expressed protein FN455-S Chr8 140695 172284 0 0 Deletion 31589 LOC_Os08g01250 retrotransposon protein, putative, unclassified FN455-S Chr8 140695 172284 0 0 Deletion 31589 LOC_Os08g01260 VQ domain containing protein, putative, expressed FN455-S Chr8 140695 172284 0 0 Deletion 31589 LOC_Os08g01270 protein kinase family protein, putative, expressed FN455-S Chr8 18334763 18942441 0 0 Inversion 607678 LOC_Os08g29830 transposon protein, putative, CACTA, En/Spm sub-class FN455-S Chr8 19194586 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN455-S Chr8 22106724 22106801 0 0 Deletion 77 FN455-S Chr8 234871 234871 0 0 Insertion 6 FN455-S Chr8 28318784 Chr5 5289689 0 Translocation 0 FN455-S Chr9 10407045 10407045 0 0 Insertion 2 FN455-S Chr9 15384979 15386554 0 0 Deletion 1575 LOC_Os09g25620 CPuORF8 - conserved peptide uORF-containing transcript, expressed FN455-S Chr9 15384979 15386554 0 0 Deletion 1575 LOC_Os09g25625 S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed FN455-S Chr9 15913297 15913298 0 0 Deletion 1 FN455-S Chr9 17342151 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN455-S Chr9 5294694 T-A 0 0 Single Base Substitution 0 INTRON HET