FN4556-S Chr1 16578160 C-T 0 0 Single Base Substitution 0 HET LOC_Os01g29580 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr1 20651357 A-T 0 0 Single Base Substitution 0 HET FN4556-S Chr1 26044888 C-T 0 0 Single Base Substitution 0 HET LOC_Os01g45860 GRAS family transcription factor domain containing protein, expressed FN4556-S Chr1 37213454 37213454 0 0 Insertion 1 HOMO LOC_Os01g64070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4556-S Chr10 11107372 11107374 0 0 Deletion 3 HET FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24060 expressed protein FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24070 expressed protein FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24080 hypothetical protein FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24090 glucosyltransferase, putative, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24094 expressed protein FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24100 expressed protein FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24110 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24120 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24140 expressed protein FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24150 zinc knuckle family protein, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24160 retrotransposon protein, putative, Ty3-gypsy subclass FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24170 retrotransposon protein, putative, unclassified FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24180 conserved hypothetical protein FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24210 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24240 transposon protein, putative, unclassified FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24250 retrotransposon protein, putative, Ty3-gypsy subclass FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24260 expressed protein FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24270 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24280 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24290 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24300 circumsporozoite protein, putative, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24340 expressed protein FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24350 transposon protein, putative, unclassified, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24360 retrotransposon, putative, centromere-specific FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24370 retrotransposon, putative, centromere-specific, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24380 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24390 expressed protein FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24400 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24410 retrotransposon, putative, centromere-specific FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4556-S Chr10 12325001 12534000 0 0 Deletion 209000 HOMO LOC_Os10g24430 retrotransposon protein, putative, Ty3-gypsy subclass FN4556-S Chr10 12560991 12560994 0 0 Deletion 4 HOMO FN4556-S Chr10 12948419 A-T 0 0 Single Base Substitution 0 HOMO FN4556-S Chr10 18591378 18591379 0 0 Deletion 2 HET FN4556-S Chr10 2038538 2038538 0 0 Deletion 1 HET FN4556-S Chr10 22184576 22184576 0 0 Deletion 1 HET FN4556-S Chr10 22612322 22612322 0 0 Insertion 1 HET FN4556-S Chr10 22719832 22719832 0 0 Insertion 16 HET FN4556-S Chr10 3349462 3349730 0 0 Deletion 269 HET LOC_Os10g06520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4556-S Chr10 4627326 4627326 0 0 Insertion 4 HET FN4556-S Chr11 13115791 C-G 0 0 Single Base Substitution 0 HET FN4556-S Chr11 13862668 T-A 0 0 Single Base Substitution 0 HET FN4556-S Chr11 15294931 C-T 0 0 Single Base Substitution 0 HET FN4556-S Chr11 16028906 G-A 0 0 Single Base Substitution 0 HET FN4556-S Chr11 16926333 16926333 0 0 Insertion 76 HET FN4556-S Chr11 20201467 G-A 0 0 Single Base Substitution 0 HET FN4556-S Chr11 20900871 C-T 0 0 Single Base Substitution 0 HET LOC_Os11g35650 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4556-S Chr11 21267725 C-T 0 0 Single Base Substitution 0 HET FN4556-S Chr11 24671133 24671133 0 0 Deletion 1 HET LOC_Os11g41170 disease resistance protein RPM1, putative, expressed FN4556-S Chr11 28349967 G-A 0 0 Single Base Substitution 0 HET FN4556-S Chr11 516610 G-T 0 0 Single Base Substitution 0 HET FN4556-S Chr11 516611 C-T 0 0 Single Base Substitution 0 HET FN4556-S Chr11 516612 G-T 0 0 Single Base Substitution 0 HET FN4556-S Chr11 988107 C-T 0 0 Single Base Substitution 0 HET FN4556-S Chr12 11141520 11141603 0 0 Deletion 84 HET FN4556-S Chr12 14402641 C-A 0 0 Single Base Substitution 0 HET LOC_Os12g25070 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr12 16837224 C-A 0 0 Single Base Substitution 0 HET FN4556-S Chr12 21438615 G-A 0 0 Single Base Substitution 0 HET LOC_Os12g35280 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr12 22891456 22891456 0 0 Deletion 1 HET FN4556-S Chr12 26529184 26529187 0 0 Deletion 4 HET FN4556-S Chr12 7853097 A-G 0 0 Single Base Substitution 0 HET FN4556-S Chr2 19910409 19910409 0 0 Insertion 1 HET FN4556-S Chr2 22766655 22766696 0 0 Deletion 42 HET FN4556-S Chr2 24759160 24759160 0 0 Insertion 1 HET FN4556-S Chr2 31992514 T-A 0 0 Single Base Substitution 0 HOMO FN4556-S Chr2 34254887 C-T 0 0 Single Base Substitution 0 HET FN4556-S Chr2 8422761 8422767 0 0 Deletion 7 HET FN4556-S Chr2 9812718 9812718 0 0 Deletion 1 HET FN4556-S Chr3 10074159 10074169 0 0 Deletion 11 HOMO FN4556-S Chr3 1061090 T-A 0 0 Single Base Substitution 0 HET FN4556-S Chr3 10747950 G-A 0 0 Single Base Substitution 0 HET FN4556-S Chr3 12399158 T-A 0 0 Single Base Substitution 0 HOMO FN4556-S Chr3 19030045 19030046 0 0 Deletion 2 HOMO FN4556-S Chr3 20299878 20300110 0 0 Inversion 232 HET FN4556-S Chr3 2493091 T-G 0 0 Single Base Substitution 0 HET FN4556-S Chr3 33154424 C-A 0 0 Single Base Substitution 0 HET FN4556-S Chr3 8226008 8355495 0 0 Inversion 129487 HET FN4556-S Chr3 8226014 8355504 0 0 Inversion 129490 HET FN4556-S Chr4 12022318 C-T 0 0 Single Base Substitution 0 HET FN4556-S Chr4 17335635 17335727 0 0 Deletion 93 HET FN4556-S Chr4 17527131 17527174 0 0 Deletion 44 HET FN4556-S Chr4 18682702 18682702 0 0 Insertion 5 HET FN4556-S Chr4 18699659 18699660 0 0 Deletion 2 HET FN4556-S Chr4 32024781 T-C 0 0 Single Base Substitution 0 HOMO FN4556-S Chr4 33664240 33664240 0 0 Insertion 1 HET FN4556-S Chr4 5284154 5284154 0 0 Insertion 1 HET LOC_Os04g09840 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr4 5769879 A-G 0 0 Single Base Substitution 0 HET FN4556-S Chr4 8926402 8926406 0 0 Deletion 5 HOMO LOC_Os04g16420 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4556-S Chr5 19318655 G-T 0 0 Single Base Substitution 0 HET FN4556-S Chr5 19318656 G-T 0 0 Single Base Substitution 0 HET FN4556-S Chr5 20397125 20397216 0 0 Deletion 92 HET LOC_Os05g34420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4556-S Chr5 23457499 23457511 0 0 Deletion 13 HOMO LOC_Os05g39920 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr5 25368749 25368749 0 0 Deletion 1 HET LOC_Os05g43630 transposon protein, putative, Pong sub-class, expressed FN4556-S Chr5 29942014 29942015 0 0 Deletion 2 HET FN4556-S Chr5 5413959 5413959 0 0 Deletion 1 HET FN4556-S Chr5 6439560 G-A 0 0 Single Base Substitution 0 HET FN4556-S Chr6 13465604 13465604 0 0 Deletion 1 HOMO FN4556-S Chr6 13889971 T-C 0 0 Single Base Substitution 0 HOMO FN4556-S Chr6 14743939 14743940 0 0 Deletion 2 HET FN4556-S Chr6 20871572 20871572 0 0 Insertion 83 HET FN4556-S Chr6 22730348 22730438 0 0 Deletion 91 HET FN4556-S Chr6 23276720 23276720 0 0 Insertion 1 HET FN4556-S Chr6 29273253 29273253 0 0 Deletion 1 HET FN4556-S Chr6 29849962 29849971 0 0 Deletion 10 HOMO FN4556-S Chr6 3092895 T-G 0 0 Single Base Substitution 0 HET FN4556-S Chr6 6702241 6702253 0 0 Deletion 13 HET FN4556-S Chr6 8507675 8507675 0 0 Insertion 3 HET FN4556-S Chr7 11803365 11803365 0 0 Insertion 1 HET FN4556-S Chr7 16828819 16828819 0 0 Insertion 1 HET LOC_Os07g28750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4556-S Chr7 18008974 G-T 0 0 Single Base Substitution 0 HET FN4556-S Chr7 20899762 20899765 0 0 Deletion 4 HET FN4556-S Chr7 22949012 23563232 0 0 Inversion 614220 HOMO FN4556-S Chr7 22949021 23563231 0 0 Inversion 614210 HOMO FN4556-S Chr7 27494258 A-G 0 0 Single Base Substitution 0 HET FN4556-S Chr7 28191176 28191182 0 0 Deletion 7 HET FN4556-S Chr7 5501415 C-T 0 0 Single Base Substitution 0 HOMO FN4556-S Chr7 5623845 5623845 0 0 Deletion 1 HOMO FN4556-S Chr7 7079032 7079032 0 0 Deletion 1 HET LOC_Os07g12410 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr7 7610786 7610788 0 0 Deletion 3 HET FN4556-S Chr7 8133094 T-C 0 0 Single Base Substitution 0 HOMO FN4556-S Chr7 8766718 8766718 0 0 Insertion 1 HET LOC_Os07g15210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4556-S Chr8 10334680 A-G 0 0 Single Base Substitution 0 HET FN4556-S Chr8 12104566 12104566 0 0 Insertion 20 HET FN4556-S Chr8 18080317 18080322 0 0 Deletion 6 HET FN4556-S Chr8 23396359 23396490 0 0 Inversion 131 HET FN4556-S Chr8 27255845 27255845 0 0 Insertion 1 HET LOC_Os08g43110 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr8 328363 328363 0 0 Insertion 1 HET FN4556-S Chr8 3571655 A-G 0 0 Single Base Substitution 0 HOMO FN4556-S Chr9 11716418 T-C 0 0 Single Base Substitution 0 HET FN4556-S Chr9 13336715 G-A 0 0 Single Base Substitution 0 HET LOC_Os09g22020 retrotransposon protein, putative, unclassified, expressed FN4556-S Chr9 1821177 A-G 0 0 Single Base Substitution 0 HOMO FN4556-S Chr9 18223848 C-A 0 0 Single Base Substitution 0 HOMO FN4556-S Chr9 3745189 C-T 0 0 Single Base Substitution 0 HOMO FN4556-S Chr9 4815938 C-A 0 0 Single Base Substitution 0 HET FN4556-S Chr9 8308264 A-T 0 0 Single Base Substitution 0 HET