FN4559-S Chr1 12153934 12153934 0 0 Insertion 1 HET FN4559-S Chr1 13229786 13229793 0 0 Deletion 7 HOMO LOC_Os01g23560 retrotransposon protein, putative, unclassified, expressed FN4559-S Chr1 19857876 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g35860 transposon protein, putative, Mutator sub-class, expressed FN4559-S Chr1 19937879 19937881 0 0 Deletion 2 HOMO FN4559-S Chr1 2338688 2338689 0 0 Deletion 1 HOMO FN4559-S Chr1 2600344 G-C 0 0 Single Base Substitution 0 INTRON HET FN4559-S Chr1 28962461 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4559-S Chr1 30751617 30751617 0 0 Insertion 1 HET FN4559-S Chr1 32653945 32653945 0 0 Insertion 1 HET FN4559-S Chr1 7722633 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr10 12017585 Chr6 13843614 0 Translocation 0 HET LOC_Os10g23050 helix-loop-helix DNA-binding protein, putative, expressed FN4559-S Chr10 12017733 Chr6 15108779 0 Translocation 0 HET LOC_Os10g23050 helix-loop-helix DNA-binding protein, putative, expressed FN4559-S Chr10 4351344 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr10 4565997 4566001 0 0 Deletion 4 HOMO FN4559-S Chr10 5961239 5961239 0 0 Insertion 1 HET FN4559-S Chr10 8506780 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN4559-S Chr11 11501358 11501359 0 0 Deletion 1 HOMO FN4559-S Chr11 11685467 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN4559-S Chr11 16225391 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr11 19049862 19049865 0 0 Deletion 3 HOMO FN4559-S Chr11 20624971 20624972 0 0 Deletion 1 HOMO LOC_Os11g35160 retrotransposon protein, putative, unclassified, expressed FN4559-S Chr11 24763424 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4559-S Chr11 4783224 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4559-S Chr11 9582746 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os11g17200 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4559-S Chr12 14920838 14920850 0 0 Deletion 12 HOMO FN4559-S Chr12 20230683 Chr2 24154289 0 Translocation 0 HET FN4559-S Chr12 2269355 2269364 0 0 Deletion 9 HOMO FN4559-S Chr12 3017790 3017790 0 0 Insertion 2 HET FN4559-S Chr12 4835162 4835162 0 0 Insertion 2 HET FN4559-S Chr12 6685564 6685566 0 0 Deletion 2 HOMO LOC_Os12g12180 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4559-S Chr2 12008374 12008374 0 0 Insertion 1 HET FN4559-S Chr2 15935660 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g27110 expressed protein FN4559-S Chr2 18371424 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr2 22550444 22550445 0 0 Deletion 1 HOMO FN4559-S Chr2 23044425 23044425 0 0 Insertion 1 HET FN4559-S Chr2 23351549 23351553 0 0 Deletion 4 HOMO FN4559-S Chr2 27350930 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr2 27350931 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr2 3161237 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr2 3161238 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr2 35286640 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr2 4555036 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr3 2391984 2391985 0 0 Deletion 1 HOMO FN4559-S Chr3 24488907 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4559-S Chr3 25251888 A-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os03g44780 elongation factor Tu family protein, putative, expressed FN4559-S Chr3 28984926 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4559-S Chr3 31073901 31169887 0 0 Inversion 95987 HET FN4559-S Chr3 31883446 31883446 0 0 Insertion 1 HET FN4559-S Chr3 34527297 T-A 0 0 Single Base Substitution 0 INTRON HET FN4559-S Chr3 34527298 C-A 0 0 Single Base Substitution 0 INTRON HET FN4559-S Chr3 5313555 5313555 0 0 Insertion 1 HET FN4559-S Chr3 6927330 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr4 11977217 11977217 0 0 Insertion 1 HET FN4559-S Chr4 13435277 13435285 0 0 Deletion 8 HOMO FN4559-S Chr4 17881431 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4559-S Chr4 19122096 19122102 0 0 Deletion 6 HOMO FN4559-S Chr4 19996598 19996598 0 0 Insertion 65 HET FN4559-S Chr4 27476143 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr4 30276368 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr4 30654714 30654715 0 0 Deletion 1 HOMO FN4559-S Chr4 9082998 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4559-S Chr4 9925561 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4559-S Chr4 9935179 9935183 0 0 Deletion 4 HOMO FN4559-S Chr5 15772829 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN4559-S Chr5 18522639 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4559-S Chr5 29664552 29664553 0 0 Deletion 1 HOMO FN4559-S Chr5 666158 666158 0 0 Insertion 42 HET FN4559-S Chr6 11000810 11000810 0 0 Insertion 1 HET FN4559-S Chr6 1234225 1234226 0 0 Deletion 1 HOMO FN4559-S Chr6 14215155 14215156 0 0 Deletion 1 HOMO FN4559-S Chr6 14670413 14670437 0 0 Deletion 24 HOMO FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25580 transposon protein, putative, unclassified, expressed FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25590 expressed protein FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25600 hypothetical protein FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25605 expressed protein FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25610 transposon protein, putative, unclassified, expressed FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25620 retrotransposon protein, putative, Ty3-gypsy subclass FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25630 retrotransposon protein, putative, unclassified, expressed FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25640 retrotransposon protein, putative, unclassified FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25650 retrotransposon protein, putative, Ty3-gypsy subclass FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25660 transposon protein, putative, unclassified, expressed FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25670 expressed protein FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25680 transposon protein, putative, CACTA, En/Spm sub-class FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25690 retrotransposon protein, putative, unclassified, expressed FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25700 retrotransposon protein, putative, unclassified, expressed FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25710 retrotransposon protein, putative, unclassified, expressed FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25720 transposon protein, putative, CACTA, En/Spm sub-class FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25730 retrotransposon protein, putative, unclassified, expressed FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25740 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25750 retrotransposon protein, putative, Ty3-gypsy subclass FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4559-S Chr6 14964001 15061000 0 0 Deletion 97000 HET LOC_Os06g25780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4559-S Chr6 15081001 15109000 0 0 Deletion 28000 HET LOC_Os06g25810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4559-S Chr6 15081001 15109000 0 0 Deletion 28000 HET LOC_Os06g25820 retrotransposon protein, putative, unclassified, expressed FN4559-S Chr6 15081001 15109000 0 0 Deletion 28000 HET LOC_Os06g25830 retrotransposon protein, putative, unclassified, expressed FN4559-S Chr6 15081001 15109000 0 0 Deletion 28000 HET LOC_Os06g25840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4559-S Chr6 15081001 15109000 0 0 Deletion 28000 HET LOC_Os06g25850 retrotransposon protein, putative, unclassified, expressed FN4559-S Chr6 21044257 21044257 0 0 Insertion 1 HET FN4559-S Chr6 29535991 30520969 0 0 Inversion 984979 HET LOC_Os06g48800 OsHKT2;4 - Na+ transporter, expressed FN4559-S Chr6 29535991 30520969 0 0 Inversion 984979 HET LOC_Os06g50400 expansin precursor, putative, expressed FN4559-S Chr6 382773 382773 0 0 Insertion 2 HET FN4559-S Chr6 9388789 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr7 14366001 14383000 0 0 Deletion 17000 HOMO LOC_Os07g25150 myb-related protein 306, putative, expressed FN4559-S Chr7 14366001 14383000 0 0 Deletion 17000 HOMO LOC_Os07g25160 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4559-S Chr7 14637525 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4559-S Chr7 15083234 15083237 0 0 Deletion 3 HOMO FN4559-S Chr7 16657740 16657741 0 0 Deletion 1 HOMO FN4559-S Chr7 28875945 28875945 0 0 Insertion 1 HET FN4559-S Chr7 4194003 A-C 0 0 Single Base Substitution 0 INTRON HOMO FN4559-S Chr8 27625588 27625590 0 0 Deletion 2 HOMO FN4559-S Chr8 6699925 6699925 0 0 Insertion 1 HET FN4559-S Chr8 9045833 Chr2 15080072 0 Translocation 0 HET LOC_Os02g15950 OsFBK5 - F-box domain and kelch repeat containing protein, expressed FN4559-S Chr8 9156339 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g15120 retrotransposon protein, putative, unclassified, expressed FN4559-S Chr9 11628874 11628874 0 0 Insertion 71 HET FN4559-S Chr9 19405645 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4559-S Chr9 21053815 C-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN4559-S Chr9 6760203 6760209 0 0 Deletion 6 HOMO LOC_Os09g12000 hypothetical protein FN4559-S Chr9 9549556 T-C 0 0 Single Base Substitution 0 INTERGENIC HET