FN456-S Chr1 13951963 13951964 0 0 Deletion 1 FN456-S Chr1 16224498 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr1 28566540 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr1 30479227 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr1 30932584 30932589 0 0 Deletion 5 FN456-S Chr1 31156980 31156984 0 0 Deletion 4 FN456-S Chr1 36646900 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN456-S Chr1 38407838 38407851 0 0 Deletion 13 FN456-S Chr1 40685653 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN456-S Chr1 4383867 4383875 0 0 Deletion 8 FN456-S Chr10 16558249 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN456-S Chr10 18826146 18826149 0 0 Deletion 3 FN456-S Chr10 19772327 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr10 20120036 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr10 22785591 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr10 5486005 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN456-S Chr11 16229027 Chr1 42158279 0 Translocation 0 FN456-S Chr11 16997659 Chr2 474828 0 Translocation 0 FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42030 expressed protein FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42040 non-TIR-NBS-LRR type resistance protein, putative, expressed FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42050 expressed protein FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42060 Leucine Rich Repeat family protein, expressed FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42070 Leucine Rich Repeat family protein, expressed FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42080 expressed protein FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42090 Leucine Rich Repeat family protein, expressed FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42100 Leucine Rich Repeat family protein, expressed FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42110 expressed protein FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42120 expressed protein FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42130 transposon protein, putative, unclassified FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42140 transposon protein, putative, unclassified, expressed FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42150 hypothetical protein FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42160 F-box/LRR-repeat protein 3, putative, expressed FN456-S Chr11 25276001 25406000 0 0 Deletion 130000 LOC_Os11g42170 expressed protein FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42200 laccase precursor protein, putative, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42210 expressed protein FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42220 laccase precursor protein, putative, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42230 OsFBX430 - F-box domain containing protein, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42240 OsFBX431 - F-box domain containing protein, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42270 OsFBX432 - F-box domain containing protein, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42280 OsFBX433 - F-box domain containing protein, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42290 transferase family protein, putative, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42300 OsFBX434 - F-box domain containing protein, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42310 OsFBL58 - F-box domain and LRR containing protein, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42330 retrotransposon protein, putative, Ty3-gypsy subclass FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42340 expressed protein FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42350 glutathione synthetase, chloroplast precursor, putative, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42360 expressed protein FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42370 transferase family protein, putative, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42380 expressed protein FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42390 OsSCP64 - Putative Serine Carboxypeptidase homologue, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42400 expressed protein FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42410 expressed protein FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42420 nuclear pore protein 84/107 containing protein, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42430 transporter family protein, putative, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42440 expressed protein FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42450 leucine-rich repeat family protein, putative, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42470 expressed protein FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42480 transferase family domain containing protein, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42490 retrotransposon protein, putative, unclassified, expressed FN456-S Chr11 25417001 25594000 0 0 Deletion 177000 LOC_Os11g42500 dirigent, putative, expressed FN456-S Chr11 26532652 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr11 28162517 Chr5 14142168 0 Translocation 0 LOC_Os11g46880 protein kinase domain containing protein, expressed FN456-S Chr11 28344190 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os11g47130 protein transporter, putative, expressed FN456-S Chr11 5603295 25593863 0 0 Inversion 19990568 LOC_Os11g42500 dirigent, putative, expressed FN456-S Chr11 5603538 25261252 0 0 Inversion 19657714 LOC_Os11g42000 FRA10AC1, putative, expressed FN456-S Chr11 677330 13216940 0 0 Inversion 12539610 FN456-S Chr12 13744001 13769000 0 0 Deletion 25000 LOC_Os12g24150 expressed protein FN456-S Chr12 13744001 13769000 0 0 Deletion 25000 LOC_Os12g24160 retrotransposon protein, putative, unclassified, expressed FN456-S Chr12 13744001 13769000 0 0 Deletion 25000 LOC_Os12g24170 beta-galactosidase precursor, putative, expressed FN456-S Chr12 14554936 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN456-S Chr12 17719998 A-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN456-S Chr12 19509480 G-T 0 0 Single Base Substitution 0 INTRON HOMO FN456-S Chr12 23184050 Chr10 17400433 0 Translocation 0 LOC_Os10g33200 expressed protein FN456-S Chr12 23184050 Chr10 17400433 0 Translocation 0 LOC_Os12g37760 RGH1A, putative, expressed FN456-S Chr12 25813217 25813217 0 0 Insertion 4 FN456-S Chr12 26150514 Chr2 16427021 0 Translocation 0 LOC_Os02g27740 expressed protein FN456-S Chr12 27166873 G-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN456-S Chr12 5360423 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr12 8954890 G-T 0 0 Single Base Substitution 0 INTRON HOMO FN456-S Chr2 128203 128204 0 0 Deletion 1 FN456-S Chr2 15158254 15158285 0 0 Deletion 31 FN456-S Chr2 15240744 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN456-S Chr2 16212042 16212053 0 0 Deletion 11 FN456-S Chr2 24844454 24844460 0 0 Deletion 6 FN456-S Chr2 32555287 32555301 0 0 Deletion 14 FN456-S Chr2 34973929 34973933 0 0 Deletion 4 FN456-S Chr2 35861889 35861890 0 0 Deletion 1 FN456-S Chr3 20854070 20854073 0 0 Deletion 3 FN456-S Chr3 22465835 22465846 0 0 Deletion 11 FN456-S Chr3 302620 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN456-S Chr3 34394612 T-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN456-S Chr3 34885316 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr4 10792584 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN456-S Chr4 12122074 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN456-S Chr4 1663426 1663429 0 0 Deletion 3 FN456-S Chr4 20574010 20574011 0 0 Deletion 1 FN456-S Chr4 24957348 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr4 24957349 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr4 25260359 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr4 30333426 30333431 0 0 Deletion 5 FN456-S Chr4 31189258 T-G 0 0 Single Base Substitution 0 INTRON HET FN456-S Chr4 34006298 Chr3 18216873 0 Translocation 0 LOC_Os03g31839 transposon protein, putative, unclassified, expressed FN456-S Chr4 7870928 7870934 0 0 Deletion 6 FN456-S Chr4 8411775 8411775 0 0 Insertion 1 FN456-S Chr5 16500579 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr5 17276253 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr5 2567681 2567681 0 0 Insertion 2 FN456-S Chr5 8766577 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN456-S Chr6 10366408 14738921 0 0 Inversion 4372513 LOC_Os06g17860 hypothetical protein FN456-S Chr6 10366408 14738921 0 0 Inversion 4372513 LOC_Os06g25190 retrotransposon protein, putative, unclassified FN456-S Chr6 22364871 22364883 0 0 Deletion 12 LOC_Os06g37790 expressed protein FN456-S Chr6 23016897 23016898 0 0 Deletion 1 FN456-S Chr6 2646026 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os06g05810 transposon protein, putative, unclassified FN456-S Chr6 6451422 6473547 0 0 Inversion 22125 LOC_Os06g12080 mTERF family protein, expressed FN456-S Chr6 8644248 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr7 14026266 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN456-S Chr7 20823905 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr7 21204845 Chr6 8411333 0 Translocation 0 FN456-S Chr7 28438382 28438383 0 0 Deletion 1 FN456-S Chr8 10987891 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g17910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN456-S Chr8 12594922 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr8 16067469 16067470 0 0 Deletion 1 FN456-S Chr8 17218170 17218178 0 0 Deletion 8 FN456-S Chr8 19213259 19213265 0 0 Deletion 6 FN456-S Chr8 20203369 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN456-S Chr8 20502371 20502371 0 0 Insertion 1 FN456-S Chr8 2224660 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g04510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN456-S Chr8 25324692 C-T 0 0 Single Base Substitution 0 INTRON HET FN456-S Chr8 28319003 Chr5 5289576 0 Translocation 0 FN456-S Chr9 10051383 T-C 0 0 Single Base Substitution 0 INTRON HET FN456-S Chr9 12089095 12089097 0 0 Deletion 2 FN456-S Chr9 12979740 12979742 0 0 Deletion 2 FN456-S Chr9 13358519 13358523 0 0 Deletion 4 FN456-S Chr9 2157199 T-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET