FN4607-S Chr1 10218202 10532432 0 0 Inversion 314231 HOMO LOC_Os01g18240 MYB family transcription factor, putative, expressed FN4607-S Chr1 10218211 10532438 0 0 Inversion 314228 HOMO LOC_Os01g18240 MYB family transcription factor, putative, expressed FN4607-S Chr1 10587294 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4607-S Chr1 24760063 24760234 0 0 Inversion 172 HET FN4607-S Chr1 41251001 41272000 0 0 Deletion 21000 HET LOC_Os01g71300 S-formylglutathione hydrolase, putative, expressed FN4607-S Chr1 5602865 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4607-S Chr1 5958846 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11360 expressed protein FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11370 ATP-dependent RNA helicase, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11390 expressed protein FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11400 hypothetical protein FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11414 sodium/calcium exchanger protein, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11430 expressed protein FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11450 retrotransposon protein, putative, Ty1-copia subclass, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11460 zinc finger, C3HC4 type domain containing protein, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11470 expressed protein FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11480 zinc finger, C3HC4 type domain containing protein, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11490 zinc finger, C3HC4 type domain containing protein, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11500 zinc finger, C3HC4 type domain containing protein, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11510 OsMADS91 - MADS-box family gene with M-beta type-box, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11520 RING-H2 finger protein, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11550 TCP family transcription factor, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11570 GDSL-like lipase/acylhydrolase, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11580 bromodomain containing protein, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11590 uncharacterized protein HI0077, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11600 expressed protein FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11620 GDSL-like lipase/acylhydrolase, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11640 expressed protein FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11650 GDSL-like lipase/acylhydrolase, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11660 GDSL-like lipase/acylhydrolase, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11670 OsSCP2 - Putative Serine Carboxypeptidase homologue, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11680 transposon protein, putative, unclassified, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11690 expressed protein FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11700 GDSL-like lipase/acylhydrolase, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11704 hypothetical protein FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11710 GDSL-like lipase/acylhydrolase, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11720 transposable element protein, putative, containing Pfam profile: PF03004, Transposase_24, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11730 GDSL-like lipase/acylhydrolase, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11740 GDSL-like lipase/acylhydrolase, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11750 GDSL-like lipase/acylhydrolase, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11760 GDSL-like lipase/acylhydrolase, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11770 expressed protein FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11780 expressed protein FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11790 GDSL-like lipase/acylhydrolase, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11800 retrotransposon protein, putative, unclassified, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11810 powdery mildew resistant protein 5, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11820 expressed protein FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11830 oryzain alpha chain precursor, putative, expressed FN4607-S Chr1 6103001 6401000 0 0 Deletion 298000 HET LOC_Os01g11840 xylem cysteine proteinase 2 precursor, putative, expressed FN4607-S Chr10 10043080 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g20020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4607-S Chr10 1820324 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4607-S Chr10 20216144 Chr1 42529151 0 Translocation 0 HET LOC_Os01g36420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN4607-S Chr10 5026126 5026126 0 0 Insertion 2 HET FN4607-S Chr10 7750456 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g14795 retrotransposon protein, putative, unclassified, expressed FN4607-S Chr10 8574604 8574604 0 0 Insertion 1 HET FN4607-S Chr10 9029743 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4607-S Chr10 9991001 10035000 0 0 Deletion 44000 HET LOC_Os10g19925 expressed protein FN4607-S Chr10 9991001 10035000 0 0 Deletion 44000 HET LOC_Os10g19930 retrotransposon protein, putative, unclassified, expressed FN4607-S Chr10 9991001 10035000 0 0 Deletion 44000 HET LOC_Os10g19940 retrotransposon protein, putative, unclassified FN4607-S Chr10 9991001 10035000 0 0 Deletion 44000 HET LOC_Os10g19950 retrotransposon protein, putative, unclassified, expressed FN4607-S Chr10 9991001 10035000 0 0 Deletion 44000 HET LOC_Os10g19960 beta-galactosidase, putative, expressed FN4607-S Chr10 9991001 10035000 0 0 Deletion 44000 HET LOC_Os10g19970 expressed protein FN4607-S Chr10 9991001 10035000 0 0 Deletion 44000 HET LOC_Os10g19980 conserved hypothetical protein FN4607-S Chr10 9991001 10035000 0 0 Deletion 44000 HET LOC_Os10g19990 expressed protein FN4607-S Chr10 9991001 10035000 0 0 Deletion 44000 HET LOC_Os10g20000 retrotransposon protein, putative, unclassified, expressed FN4607-S Chr11 12121961 12121962 0 0 Deletion 1 HOMO FN4607-S Chr11 15186049 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g26490 retrotransposon protein, putative, Ty3-gypsy subclass FN4607-S Chr11 17833607 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4607-S Chr11 25740024 25740027 0 0 Deletion 3 HOMO FN4607-S Chr11 27727426 27727426 0 0 Insertion 78 HET FN4607-S Chr11 9987092 9987092 0 0 Insertion 48 HET FN4607-S Chr12 11689896 11689896 0 0 Insertion 1 HET FN4607-S Chr12 16228871 16228871 0 0 Insertion 1 HET FN4607-S Chr12 1702520 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g04050 retrotransposon protein, putative, unclassified, expressed FN4607-S Chr12 24512866 24860885 0 0 Inversion 348020 HET FN4607-S Chr12 9285107 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g16230 exostosin, putative, expressed FN4607-S Chr2 11150894 11150899 0 0 Deletion 5 HOMO FN4607-S Chr2 11838832 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4607-S Chr2 16459247 16459314 0 0 Deletion 67 HOMO FN4607-S Chr2 22204172 22204176 0 0 Deletion 4 HOMO LOC_Os02g36810 cytokinin-O-glucosyltransferase 2, putative, expressed FN4607-S Chr2 30036708 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g49120 retrotransposon protein, putative, unclassified, expressed FN4607-S Chr3 15848132 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4607-S Chr3 15848134 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4607-S Chr3 16385110 16385110 0 0 Insertion 2 HET FN4607-S Chr3 16752683 16752686 0 0 Deletion 3 HOMO FN4607-S Chr3 23113720 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4607-S Chr3 25382334 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4607-S Chr3 35622536 35622539 0 0 Deletion 3 HOMO LOC_Os03g63000 transposon protein, putative, unclassified FN4607-S Chr4 14963109 14963109 0 0 Insertion 1 HET FN4607-S Chr4 33575297 33575309 0 0 Deletion 12 HOMO FN4607-S Chr4 6036445 T-C 0 0 Single Base Substitution 0 INTRON HET FN4607-S Chr4 9253174 9253174 0 0 Insertion 1 HET LOC_Os04g16910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN4607-S Chr5 10498656 10498677 0 0 Deletion 21 HOMO FN4607-S Chr5 1104122 A-C 0 0 Single Base Substitution 0 INTRON HOMO FN4607-S Chr5 12834837 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN4607-S Chr5 18661103 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN4607-S Chr5 22209474 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4607-S Chr5 9456893 9456898 0 0 Deletion 5 HOMO FN4607-S Chr6 11859588 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4607-S Chr6 16291221 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4607-S Chr6 24481278 24481279 0 0 Deletion 1 HOMO FN4607-S Chr6 24647684 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN4607-S Chr6 29516905 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g48770 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed FN4607-S Chr6 29516906 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g48770 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed FN4607-S Chr6 9304704 9304708 0 0 Deletion 4 HOMO FN4607-S Chr7 14058264 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os07g24710 retrotransposon protein, putative, unclassified, expressed FN4607-S Chr7 16693543 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4607-S Chr7 21549231 21549233 0 0 Deletion 2 HOMO FN4607-S Chr7 25385984 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN4607-S Chr7 27246669 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN4607-S Chr7 28867623 28867623 0 0 Insertion 1 HET FN4607-S Chr8 12438243 12438243 0 0 Insertion 1 HET FN4607-S Chr8 17372438 17372438 0 0 Insertion 2 HET FN4607-S Chr8 17432896 17432897 0 0 Deletion 1 HOMO FN4607-S Chr8 25298963 25298964 0 0 Deletion 1 HOMO FN4607-S Chr8 25630710 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN4607-S Chr8 28032789 28032789 0 0 Insertion 1 HET FN4607-S Chr8 6963019 6963020 0 0 Deletion 1 HOMO FN4607-S Chr9 1232178 C-A 0 0 Single Base Substitution 0 INTRON HET FN4607-S Chr9 13090259 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4607-S Chr9 13093846 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4607-S Chr9 13093848 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN4607-S Chr9 14464181 14464181 0 0 Insertion 1 HET FN4607-S Chr9 3709162 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN4607-S Chr9 4654509 4654510 0 0 Deletion 1 HOMO FN4607-S Chr9 6285092 6285098 0 0 Deletion 6 HOMO LOC_Os09g11320 expressed protein FN4607-S Chr9 8464435 8464436 0 0 Deletion 1 HOMO