FN474-S Chr1 10327797 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN474-S Chr1 10339849 10339855 0 0 Deletion 6 FN474-S Chr1 23437474 23437513 0 0 Deletion 39 FN474-S Chr1 25324505 25324517 0 0 Deletion 12 FN474-S Chr1 34313108 34313116 0 0 Deletion 8 LOC_Os01g59350 transcription factor, putative, expressed FN474-S Chr1 34425837 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g59540 GRF zinc finger family protein FN474-S Chr1 42382042 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN474-S Chr1 7519615 7519617 0 0 Deletion 2 LOC_Os01g13490 expressed protein FN474-S Chr1 8096121 8096126 0 0 Deletion 5 LOC_Os01g14450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN474-S Chr1 8938808 8938808 0 0 Insertion 3 FN474-S Chr10 1030548 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN474-S Chr10 1159000 1159011 0 0 Deletion 11 FN474-S Chr10 15163093 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN474-S Chr10 15557702 Chr2 4988481 0 Translocation 0 FN474-S Chr10 21418965 21419021 0 0 Deletion 56 FN474-S Chr10 9274750 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN474-S Chr11 14480752 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN474-S Chr11 17124311 17124314 0 0 Deletion 3 FN474-S Chr11 19861979 Chr7 7093263 0 Translocation 0 LOC_Os07g12430 hypothetical protein FN474-S Chr11 19861979 Chr7 7093263 0 Translocation 0 LOC_Os11g33970 plant protein of unknown function domain containing protein, expressed FN474-S Chr11 27826722 Chr6 25898116 0 Translocation 0 FN474-S Chr11 4361218 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN474-S Chr12 13321587 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g23530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN474-S Chr12 18846915 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN474-S Chr12 18846916 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN474-S Chr12 21770770 21770789 0 0 Deletion 19 FN474-S Chr12 25630446 25630504 0 0 Deletion 58 FN474-S Chr12 9228980 Chr4 7080219 0 Translocation 0 FN474-S Chr12 9791088 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN474-S Chr12 9835918 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN474-S Chr2 10199560 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN474-S Chr2 12125224 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN474-S Chr2 19886019 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN474-S Chr2 23875310 23875312 0 0 Deletion 2 FN474-S Chr2 28388137 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN474-S Chr2 28532323 28532327 0 0 Deletion 4 FN474-S Chr2 3901740 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_STOP HET FN474-S Chr3 15542750 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g27140 retrotransposon protein, putative, unclassified, expressed FN474-S Chr3 15909072 G-T 0 0 Single Base Substitution 0 INTRON HET FN474-S Chr3 22281753 22281753 0 0 Insertion 16 LOC_Os03g40100 ACT domain containing protein, expressed FN474-S Chr3 4920288 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN474-S Chr4 15030926 Chr2 10522458 0 Translocation 0 LOC_Os02g18110 hypothetical protein FN474-S Chr4 15030926 Chr2 10522458 0 Translocation 0 LOC_Os04g25850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN474-S Chr4 15325223 C-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed FN474-S Chr4 1605980 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN474-S Chr4 16416734 Chr1 32335247 0 Translocation 0 LOC_Os01g56150 OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed FN474-S Chr4 4018403 4018417 0 0 Deletion 14 FN474-S Chr5 12377892 12377903 0 0 Deletion 11 LOC_Os05g21040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN474-S Chr5 13180573 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN474-S Chr5 15281078 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN474-S Chr5 18217872 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN474-S Chr5 19653417 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN474-S Chr5 20369899 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN474-S Chr5 24126885 24126885 0 0 Insertion 1 FN474-S Chr5 5296032 5296041 0 0 Deletion 9 FN474-S Chr6 14606073 14606090 0 0 Deletion 17 FN474-S Chr6 17296728 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN474-S Chr6 17694583 17694590 0 0 Deletion 7 FN474-S Chr6 25778143 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN474-S Chr6 5281200 5281210 0 0 Deletion 10 FN474-S Chr7 10664984 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN474-S Chr7 17189893 17189895 0 0 Deletion 2 FN474-S Chr7 18745419 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN474-S Chr7 8268647 G-A 0 0 Single Base Substitution 0 INTRON HET FN474-S Chr8 20627747 20627748 0 0 Deletion 1 LOC_Os08g33160 ZIM motif family protein, expressed FN474-S Chr9 10822710 11075945 0 0 Inversion 253235 LOC_Os09g18070 conserved hypothetical protein FN474-S Chr9 10822727 Chr2 1147581 0 Translocation 0 LOC_Os02g02930 terpene synthase, putative, expressed FN474-S Chr9 10823332 Chr2 1147574 0 Translocation 0 LOC_Os02g02930 terpene synthase, putative, expressed FN474-S Chr9 10823336 10828817 0 0 Inversion 5481 FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17710 transposon protein, putative, unclassified, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17720 retrotransposon protein, putative, unclassified, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17730 proton pump interactor, putative, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17740 chlorophyll A-B binding protein, putative, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17750 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17760 expressed protein FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17770 retrotransposon protein, putative, unclassified, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17780 retrotransposon protein, putative, Ty3-gypsy subclass FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17790 expressed protein FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17800 retrotransposon protein, putative, unclassified, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17810 leucine zipper protein-like, putative, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17820 hypothetical protein FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17830 protein transport protein Sec61 subunit alpha, putative, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17840 protein transport protein Sec61 subunit alpha, putative, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17850 acetyltransferase type B catalytic subunit, putative, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17860 retrotransposon protein, putative, unclassified, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17870 cytidylyltransferase domain containing protein, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17880 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17890 expressed protein FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17900 expressed protein FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17910 expressed protein FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17920 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17930 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17940 expressed protein FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17950 retrotransposon protein, putative, unclassified FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17960 retrotransposon protein, putative, unclassified FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17970 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17980 expressed protein FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g17990 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g18000 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g18010 expressed protein FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g18020 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g18040 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g18050 expressed protein FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g18060 hypothetical protein FN474-S Chr9 10828811 11075974 0 0 Deletion 247163 LOC_Os09g18070 conserved hypothetical protein FN474-S Chr9 19907845 Chr3 34805897 0 Translocation 0 LOC_Os03g61290 ATCHX, putative, expressed FN474-S Chr9 19907845 Chr3 34805897 0 Translocation 0 LOC_Os09g33700 expressed protein FN474-S Chr9 20148851 20148858 0 0 Deletion 7 LOC_Os09g34130 GRAM domain containing protein, expressed FN474-S Chr9 71858 C-A 0 0 Single Base Substitution 0 INTERGENIC HET