FN488-S Chr1 11421333 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr1 13306268 13307275 0 0 Deletion 1007 FN488-S Chr1 16684292 16684293 0 0 Deletion 1 FN488-S Chr1 1862719 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN488-S Chr1 19211662 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g34800 retrotransposon protein, putative, unclassified, expressed FN488-S Chr1 24556694 24556701 0 0 Deletion 7 FN488-S Chr1 32965152 32965172 0 0 Deletion 20 FN488-S Chr1 33192619 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN488-S Chr1 34637602 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN488-S Chr1 39380384 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr10 12101135 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN488-S Chr10 14015593 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr10 14645764 14645776 0 0 Deletion 12 FN488-S Chr10 15311567 15311571 0 0 Deletion 4 FN488-S Chr10 21038695 21038699 0 0 Deletion 4 LOC_Os10g39430 expressed protein FN488-S Chr11 10512913 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr11 13719505 C-T 0 0 Single Base Substitution 0 INTRON HET FN488-S Chr11 17519776 17519776 0 0 Insertion 3 FN488-S Chr11 19949118 19949120 0 0 Deletion 2 FN488-S Chr11 22839130 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr11 27264195 Chr9 12172766 0 Translocation 0 LOC_Os09g20284 amine oxidase, flavin-containing, domain containing protein, expressed FN488-S Chr11 6225754 Chr9 14083408 0 Translocation 0 LOC_Os11g11240 expressed protein FN488-S Chr11 9546637 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr11 9546638 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr12 10082461 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr12 19441316 19441335 0 0 Deletion 19 LOC_Os12g32210 autophagy-related protein 10, putative, expressed FN488-S Chr12 26282178 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr12 3070913 3172435 0 0 Deletion 101522 LOC_Os12g06420 retrotransposon protein, putative, unclassified FN488-S Chr12 3070913 3172435 0 0 Deletion 101522 LOC_Os12g06430 retrotransposon protein, putative, unclassified FN488-S Chr12 3070913 3172435 0 0 Deletion 101522 LOC_Os12g06440 expressed protein FN488-S Chr12 3070913 3172435 0 0 Deletion 101522 LOC_Os12g06450 expressed protein FN488-S Chr12 3070913 3172435 0 0 Deletion 101522 LOC_Os12g06464 expressed protein FN488-S Chr12 3070913 3172435 0 0 Deletion 101522 LOC_Os12g06480 PHD-finger family protein, expressed FN488-S Chr12 3070913 3172435 0 0 Deletion 101522 LOC_Os12g06490 STE_PAK_Ste20_Slob_Wnk.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed FN488-S Chr12 3070913 3172435 0 0 Deletion 101522 LOC_Os12g06500 expressed protein FN488-S Chr12 3070913 3172435 0 0 Deletion 101522 LOC_Os12g06510 calcineurin B, putative, expressed FN488-S Chr12 3070913 3172435 0 0 Deletion 101522 LOC_Os12g06520 bZIP transcription factor domain containing protein, expressed FN488-S Chr12 3070913 3172435 0 0 Deletion 101522 LOC_Os12g06530 retrotransposon protein, putative, unclassified, expressed FN488-S Chr12 3070913 3172435 0 0 Deletion 101522 LOC_Os12g06540 GRAS family transcription factor containing protein, expressed FN488-S Chr12 4746038 Chr9 13583070 0 Translocation 0 FN488-S Chr12 4755836 G-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN488-S Chr12 5415173 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr12 8730990 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os12g15314 staphylococcal nuclease homologue, putative, expressed FN488-S Chr2 10866535 10866546 0 0 Deletion 11 LOC_Os02g18650 pectinesterase, putative, expressed FN488-S Chr2 16075430 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN488-S Chr2 20544901 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr2 32689999 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN488-S Chr2 33488113 C-T 0 0 Single Base Substitution 0 INTRON HET FN488-S Chr2 4440718 T-G 0 0 Single Base Substitution 0 INTRON HOMO FN488-S Chr2 8253107 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr3 11784504 Chr1 21798612 0 Translocation 0 FN488-S Chr3 12514739 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr3 12876099 12876099 0 0 Insertion 1 FN488-S Chr3 13565552 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN488-S Chr3 17940029 17940042 0 0 Deletion 13 LOC_Os03g31490 expressed protein FN488-S Chr3 24815001 24839000 0 0 Deletion 24000 LOC_Os03g44150 aminotransferase, putative, expressed FN488-S Chr3 24815001 24839000 0 0 Deletion 24000 LOC_Os03g44159 expressed protein FN488-S Chr3 24815001 24839000 0 0 Deletion 24000 LOC_Os03g44170 glutathione S-transferase, putative, expressed FN488-S Chr3 24815001 24839000 0 0 Deletion 24000 LOC_Os03g44180 hydroquinone glucosyltransferase, putative, expressed FN488-S Chr3 24815001 24839000 0 0 Deletion 24000 LOC_Os03g44190 expressed protein FN488-S Chr3 24815001 24839000 0 0 Deletion 24000 LOC_Os03g44200 beclin-1, putative, expressed FN488-S Chr3 32214388 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN488-S Chr3 34416788 Chr2 5772738 0 Translocation 0 LOC_Os03g60550 ThiF family domain containing protein, putative, expressed FN488-S Chr3 34790527 34790536 0 0 Deletion 9 FN488-S Chr3 6534502 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr3 7680728 7680731 0 0 Deletion 3 FN488-S Chr3 8408103 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g15360 nmrA-like family domain containing protein, expressed FN488-S Chr3 8408104 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g15360 nmrA-like family domain containing protein, expressed FN488-S Chr4 12196256 12196263 0 0 Deletion 7 FN488-S Chr4 17412344 17412350 0 0 Deletion 6 FN488-S Chr4 22414660 C-G 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN488-S Chr4 22903263 G-T 0 0 Single Base Substitution 0 INTRON HOMO FN488-S Chr4 25532159 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g43130 transcriptional corepressor LEUNIG, putative, expressed FN488-S Chr4 31103461 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN488-S Chr4 8847878 15937110 0 0 Inversion 7089232 LOC_Os04g16280 retrotransposon protein, putative, unclassified, expressed FN488-S Chr4 8847878 15937110 0 0 Inversion 7089232 LOC_Os04g26940 retrotransposon protein, putative, unclassified FN488-S Chr5 12595947 12595948 0 0 Deletion 1 FN488-S Chr5 12922167 12922181 0 0 Deletion 14 FN488-S Chr5 20588653 20588662 0 0 Deletion 9 FN488-S Chr5 7919575 7919575 0 0 Insertion 2 FN488-S Chr6 11994353 12018335 0 0 Deletion 23982 LOC_Os06g20800 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN488-S Chr6 11994353 12018335 0 0 Deletion 23982 LOC_Os06g20810 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN488-S Chr6 11994353 12018335 0 0 Deletion 23982 LOC_Os06g20820 expressed protein FN488-S Chr6 15600972 15600999 0 0 Deletion 27 FN488-S Chr6 20184463 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr6 20184464 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr6 22677815 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN488-S Chr6 31199284 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN488-S Chr7 6521274 T-A 0 0 Single Base Substitution 0 INTRON HET FN488-S Chr8 15976251 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN488-S Chr8 1959719 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN488-S Chr8 28284060 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN488-S Chr8 9385661 A-T 0 0 Single Base Substitution 0 INTRON HET FN488-S Chr9 2068129 Chr3 20771698 0 Translocation 0 FN488-S Chr9 8859972 8859974 0 0 Deletion 2 FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g15950 expressed protein FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g15960 retrotransposon protein, putative, unclassified, expressed FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g15970 expressed protein FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g15980 expressed protein FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g16000 NBS-LRR disease resistance protein, putative, expressed FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g16010 BURP domain containing protein, expressed FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g16020 expressed protein FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g16030 cytokinin-O-glucosyltransferase 1, putative, expressed FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g16040 retrotransposon protein, putative, unclassified, expressed FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g16050 ankyrin repeat family protein, putative, expressed FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g16060 expressed protein FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g16070 expressed protein FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g16080 retrotransposon protein, putative, unclassified, expressed FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g16090 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g16100 retrotransposon protein, putative, unclassified, expressed FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g16110 expressed protein FN488-S Chr9 9751350 9835231 0 0 Deletion 83881 LOC_Os09g16120 hypothetical protein FN488-S Chr9 9922824 9922839 0 0 Deletion 15 LOC_Os09g16260 expressed protein