FN495-S Chr1 10837317 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr1 15195189 C-A 0 0 Single Base Substitution 0 INTRON HET FN495-S Chr1 19536118 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN495-S Chr1 32981318 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN495-S Chr1 33408685 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN495-S Chr1 34064088 34064088 0 0 Insertion 2 FN495-S Chr1 4304915 4304916 0 0 Deletion 1 FN495-S Chr1 6396415 6396425 0 0 Deletion 10 LOC_Os01g11830 oryzain alpha chain precursor, putative, expressed FN495-S Chr1 718524 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN495-S Chr10 13619028 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr10 20264874 20264908 0 0 Deletion 34 FN495-S Chr10 21054395 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr10 3574373 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr10 6194607 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr10 8688636 8688650 0 0 Deletion 14 FN495-S Chr11 15044954 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN495-S Chr11 20465940 20465950 0 0 Deletion 10 FN495-S Chr11 23605062 23605062 0 0 Insertion 1 FN495-S Chr11 2855070 2855083 0 0 Deletion 13 FN495-S Chr11 5138956 A-T 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os11g09610 hypothetical protein FN495-S Chr11 5387602 5387602 0 0 Insertion 2 FN495-S Chr12 12213251 12213257 0 0 Deletion 6 LOC_Os12g21720 retrotransposon protein, putative, unclassified, expressed FN495-S Chr12 12695873 12695892 0 0 Deletion 19 FN495-S Chr12 21426081 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN495-S Chr12 22272343 T-G 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os12g36380 retrotransposon protein, putative, unclassified FN495-S Chr12 23209988 23209996 0 0 Deletion 8 FN495-S Chr12 26157295 26157298 0 0 Deletion 3 FN495-S Chr12 659277 659294 0 0 Deletion 17 FN495-S Chr2 11311985 11311986 0 0 Deletion 1 FN495-S Chr2 20647504 20647520 0 0 Deletion 16 FN495-S Chr2 21595622 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr2 25472977 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr2 27750667 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr2 29211569 29212694 0 0 Deletion 1125 FN495-S Chr2 29311572 29311573 0 0 Deletion 1 FN495-S Chr2 30370446 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr2 31609640 31609641 0 0 Deletion 1 LOC_Os02g51620 glycosyl hydrolase family 3 protein, putative, expressed FN495-S Chr2 7679806 7679807 0 0 Deletion 1 FN495-S Chr3 17950884 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr3 7805970 7805971 0 0 Deletion 1 LOC_Os03g14349 retrotransposon protein, putative, Ty1-copia subclass, expressed FN495-S Chr4 15526245 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr4 16531840 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr4 30031736 30031740 0 0 Deletion 4 FN495-S Chr4 34242041 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g57550 amine oxidase, flavin-containing, domain containing protein, expressed FN495-S Chr4 35433829 35433833 0 0 Deletion 4 FN495-S Chr4 4031555 4031557 0 0 Deletion 2 FN495-S Chr4 7488443 7488446 0 0 Deletion 3 LOC_Os04g13450 retrotransposon protein, putative, unclassified, expressed FN495-S Chr5 11233075 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN495-S Chr5 18979214 18979218 0 0 Deletion 4 FN495-S Chr5 18979218 18979222 0 0 Deletion 4 FN495-S Chr5 20684291 Chr1 38624282 0 Translocation 0 FN495-S Chr5 25395997 25396005 0 0 Deletion 8 LOC_Os05g43680 expressed protein FN495-S Chr5 6776726 6776732 0 0 Deletion 6 FN495-S Chr5 7599634 7599642 0 0 Deletion 8 LOC_Os05g13720 retrotransposon protein, putative, unclassified FN495-S Chr6 14825140 14825149 0 0 Deletion 9 FN495-S Chr6 23471544 23861646 0 0 Inversion 390102 LOC_Os06g39520 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed FN495-S Chr6 499964 C-T 0 0 Single Base Substitution 0 INTRON HET FN495-S Chr6 5728126 5728130 0 0 Deletion 4 FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24410 retrotransposon protein, putative, unclassified FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24420 retrotransposon protein, putative, Ty3-gypsy subclass FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24430 retrotransposon protein, putative, Ty3-gypsy subclass FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24440 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24450 retrotransposon protein, putative, unclassified FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24460 retrotransposon protein, putative, unclassified FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24480 retrotransposon protein, putative, unclassified, expressed FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24498 transposon protein, putative, unclassified FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24530 retrotransposon protein, putative, unclassified FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24540 retrotransposon protein, putative, unclassified FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24549 transposon protein, putative, unclassified FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24560 retrotransposon protein, putative, unclassified, expressed FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24569 transposon protein, putative, unclassified FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24578 transposon protein, putative, unclassified FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24590 retrotransposon protein, putative, unclassified, expressed FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24610 retrotransposon protein, putative, Ty3-gypsy subclass FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24620 retrotransposon protein, putative, unclassified, expressed FN495-S Chr7 13889001 14016000 0 0 Deletion 127000 LOC_Os07g24630 retrotransposon, putative, centromere-specific FN495-S Chr7 5104661 5104666 0 0 Deletion 5 LOC_Os07g09610 CAMK_KIN1/SNF1/Nim1_like_AMPKh.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN495-S Chr8 15996787 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr8 22452168 22452170 0 0 Deletion 2 FN495-S Chr8 22537092 22537111 0 0 Deletion 19 FN495-S Chr8 3392974 3392974 0 0 Insertion 2 FN495-S Chr9 17787596 17787596 0 0 Insertion 1 FN495-S Chr9 20341374 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr9 21178913 21178930 0 0 Deletion 17 FN495-S Chr9 21188220 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN495-S Chr9 21347675 21347682 0 0 Deletion 7 LOC_Os09g37012 eukaryotic aspartyl protease domain containing protein, expressed FN495-S Chr9 7759038 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN495-S Chr9 9061689 A-T 0 0 Single Base Substitution 0 INTERGENIC HET