FN496-S Chr1 21573911 21573928 0 0 Deletion 17 FN496-S Chr1 29814891 34448235 0 0 Inversion 4633344 LOC_Os01g59570 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN496-S Chr1 32893855 32893855 0 0 Insertion 1 FN496-S Chr1 39197105 39197112 0 0 Deletion 7 FN496-S Chr1 7599883 7599894 0 0 Deletion 11 FN496-S Chr1 8874929 8874936 0 0 Deletion 7 FN496-S Chr1 9527960 9559453 0 0 Deletion 31493 LOC_Os01g16780 retrotransposon protein, putative, unclassified, expressed FN496-S Chr1 9527960 9559453 0 0 Deletion 31493 LOC_Os01g16790 retrotransposon protein, putative, unclassified, expressed FN496-S Chr1 9527960 9559453 0 0 Deletion 31493 LOC_Os01g16800 expressed protein FN496-S Chr10 11329347 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN496-S Chr10 11901947 11901956 0 0 Deletion 9 FN496-S Chr10 19230623 19230625 0 0 Deletion 2 FN496-S Chr10 21218102 21218122 0 0 Deletion 20 FN496-S Chr11 13091414 13091415 0 0 Deletion 1 FN496-S Chr11 17674458 T-C 0 0 Single Base Substitution 0 INTRON HET FN496-S Chr11 17970360 17970391 0 0 Deletion 31 LOC_Os11g30880 retrotransposon protein, putative, unclassified, expressed FN496-S Chr11 18544100 18544112 0 0 Deletion 12 FN496-S Chr11 22799305 Chr2 24817280 0 Translocation 0 LOC_Os02g41450 no apical meristem protein, putative, expressed FN496-S Chr11 22799305 Chr2 24817280 0 Translocation 0 LOC_Os11g38480 NBS-LRR type disease resistance protein, putative, expressed FN496-S Chr11 23736936 23736948 0 0 Deletion 12 FN496-S Chr11 4167317 4167338 0 0 Deletion 21 FN496-S Chr11 529043 529048 0 0 Deletion 5 FN496-S Chr11 7054253 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN496-S Chr11 725734 G-A 0 0 Single Base Substitution 0 INTRON HET FN496-S Chr11 7420893 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN496-S Chr11 8688934 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN496-S Chr11 9473298 11896221 0 0 Inversion 2422923 LOC_Os11g17080 OsMPK15 - Putative MAPK based on amino acid sequence homology, expressed FN496-S Chr11 970106 970111 0 0 Deletion 5 LOC_Os11g02860 expressed protein FN496-S Chr12 11272929 Chr7 2280249 0 Translocation 0 LOC_Os12g19381 ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed FN496-S Chr12 12854157 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN496-S Chr12 13920481 Chr11 28172833 0 Translocation 0 LOC_Os11g46890 expressed protein FN496-S Chr12 13920481 Chr11 28172833 0 Translocation 0 LOC_Os12g24400 transposon protein, putative, unclassified, expressed FN496-S Chr12 15486966 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN496-S Chr12 25414125 25414125 0 0 Insertion 2 FN496-S Chr2 14721446 14721447 0 0 Deletion 1 FN496-S Chr2 15486459 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN496-S Chr2 19565336 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN496-S Chr2 24906512 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06300 GTP-binding protein lepA, putative, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06310 expressed protein FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06320 RNA recognition motif 2 domain containing protein, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06330 AP2 domain containing protein, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06340 EH domain-containing protein 1, putative, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06350 expressed protein FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06360 uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547, putative, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06370 whirly transcription factor domain containing protein, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06380 plant-specific domain TIGR01627 family protein, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06390 expressed protein FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06400 growth regulator related protein, putative, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06410 CBS domain containing membrane protein, putative, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06420 expressed protein FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06430 DUF292 domain containing protein, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06440 expressed protein FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06450 coiled-coil domain-containing protein 72, putative, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06460 expressed protein FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06470 OsFBX38 - F-box domain containing protein, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06480 SCO1 protein homolog, mitochondrial precursor, putative, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06490 vacuolar protein sorting-associated protein 4, putative, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06500 DSHCT domain containing protein, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06510 myosin heavy chain, putative, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06520 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06530 armadillo/beta-catenin repeat family protein, putative, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06540 transporter family protein, putative, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06550 retrotransposon, putative, centromere-specific FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06560 wound induced protein, putative, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06570 CAMK_KIN1/SNF1/Nim1_like.13 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06580 formin, putative, expressed FN496-S Chr2 3145001 3305000 0 0 Deletion 160000 LOC_Os02g06584 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed FN496-S Chr2 31575422 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN496-S Chr2 4755415 4755446 0 0 Deletion 31 FN496-S Chr3 2256266 2256271 0 0 Deletion 5 FN496-S Chr3 23953658 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN496-S Chr3 32059562 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN496-S Chr3 767187 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os03g02260 DnaK family protein, putative, expressed FN496-S Chr4 14314974 14314974 0 0 Insertion 2 FN496-S Chr4 16732597 16732598 0 0 Deletion 1 FN496-S Chr4 23381738 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN496-S Chr4 25784760 25784781 0 0 Deletion 21 LOC_Os04g43570 expressed protein FN496-S Chr4 6313860 6313866 0 0 Deletion 6 FN496-S Chr5 11718283 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN496-S Chr5 22687426 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN496-S Chr5 25791363 25791378 0 0 Deletion 15 FN496-S Chr5 27319161 27319168 0 0 Deletion 7 FN496-S Chr5 3101363 3101369 0 0 Deletion 6 FN496-S Chr5 37947 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN496-S Chr5 4553760 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN496-S Chr5 7097216 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os05g12350 retrotransposon protein, putative, unclassified, expressed FN496-S Chr6 11606805 11606811 0 0 Deletion 6 FN496-S Chr6 1591033 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN496-S Chr6 17888869 17888874 0 0 Deletion 5 FN496-S Chr6 25037729 25068913 0 0 Deletion 31184 LOC_Os06g41760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN496-S Chr6 25037729 25068913 0 0 Deletion 31184 LOC_Os06g41770 bZIP transcription factor domain containing protein, expressed FN496-S Chr6 25037729 25068913 0 0 Deletion 31184 LOC_Os06g41780 guanine nucleotide exchange family protein, putative, expressed FN496-S Chr6 25037729 25068913 0 0 Deletion 31184 LOC_Os06g41790 RNA recognition motif containing protein, putative, expressed FN496-S Chr6 25037729 25068913 0 0 Deletion 31184 LOC_Os06g41800 dihydroflavonol-4-reductase, putative, expressed FN496-S Chr6 26885301 26885303 0 0 Deletion 2 FN496-S Chr6 26952515 26952515 0 0 Insertion 1 FN496-S Chr6 7529819 7529824 0 0 Deletion 5 FN496-S Chr7 21493140 21493148 0 0 Deletion 8 FN496-S Chr7 26959340 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os07g45160 SAC3/GANP family protein, expressed FN496-S Chr7 8423128 8423130 0 0 Deletion 2 FN496-S Chr8 17324218 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN496-S Chr8 17520413 17520416 0 0 Deletion 3 LOC_Os08g28690 expressed protein FN496-S Chr8 18058031 18058043 0 0 Deletion 12 FN496-S Chr8 21330642 Chr1 24311716 0 Translocation 0 FN496-S Chr8 2381031 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN496-S Chr8 26477132 26477135 0 0 Deletion 3 FN496-S Chr8 27055179 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN496-S Chr9 19978297 19978303 0 0 Deletion 6 FN496-S Chr9 21263545 21263549 0 0 Deletion 4