FN499-S Chr1 16706655 16706673 0 0 Deletion 18 LOC_Os01g29820 expressed protein FN499-S Chr1 31405588 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN499-S Chr1 32718221 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN499-S Chr1 36589028 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g63150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN499-S Chr1 37789768 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN499-S Chr10 12729315 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN499-S Chr10 17639610 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN499-S Chr10 18196670 Chr9 3015086 0 Translocation 0 LOC_Os10g34090 retrotransposon protein, putative, unclassified, expressed FN499-S Chr10 19273482 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN499-S Chr10 232458 G-A 0 0 Single Base Substitution 0 INTRON HET FN499-S Chr11 15644654 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN499-S Chr11 1623145 1623145 0 0 Insertion 2 FN499-S Chr11 27329765 27329766 0 0 Deletion 1 LOC_Os11g45150 expressed protein FN499-S Chr11 28660277 28660277 0 0 Insertion 2 FN499-S Chr12 14868300 14868304 0 0 Deletion 4 LOC_Os12g25665 transposon protein, putative, unclassified, expressed FN499-S Chr12 2836412 2836417 0 0 Deletion 5 LOC_Os12g06080 expressed protein FN499-S Chr12 6558243 6558251 0 0 Deletion 8 FN499-S Chr12 9012103 C-T 0 0 Single Base Substitution 0 INTRON HET FN499-S Chr2 13309377 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN499-S Chr2 13309378 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN499-S Chr2 13313190 13313195 0 0 Deletion 5 FN499-S Chr2 20212545 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN499-S Chr2 2258866 2258873 0 0 Deletion 7 FN499-S Chr2 27670622 27670627 0 0 Deletion 5 LOC_Os02g45490 expressed protein FN499-S Chr2 30584679 30584684 0 0 Deletion 5 FN499-S Chr2 33092372 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN499-S Chr2 34663594 35090864 0 0 Inversion 427270 FN499-S Chr2 5386328 5386338 0 0 Deletion 10 FN499-S Chr3 1014561 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN499-S Chr3 13770164 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN499-S Chr3 18798440 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN499-S Chr3 20949506 20949514 0 0 Deletion 8 FN499-S Chr3 21827852 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g39284 retrotransposon protein, putative, unclassified, expressed FN499-S Chr3 25678678 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g45500 retrotransposon protein, putative, unclassified FN499-S Chr3 29889732 29889755 0 0 Deletion 23 FN499-S Chr3 581124 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN499-S Chr3 7127327 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN499-S Chr4 12547853 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN499-S Chr4 16211005 16211006 0 0 Deletion 1 LOC_Os04g27420 retrotransposon protein, putative, unclassified, expressed FN499-S Chr4 22559031 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN499-S Chr4 6712162 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN499-S Chr5 13650792 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN499-S Chr5 24201689 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN499-S Chr5 24202932 24202951 0 0 Deletion 19 FN499-S Chr5 24958632 24958637 0 0 Deletion 5 FN499-S Chr5 25558503 25558516 0 0 Deletion 13 LOC_Os05g43920 auxin response factor 14, putative, expressed FN499-S Chr6 13315232 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN499-S Chr6 24522433 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN499-S Chr6 25258697 25258705 0 0 Deletion 8 FN499-S Chr6 29877413 A-C 0 0 Single Base Substitution 0 INTRON HOMO FN499-S Chr6 3459409 3459409 0 0 Insertion 1 FN499-S Chr7 11489776 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g19420 retrotransposon protein, putative, unclassified, expressed FN499-S Chr7 13266444 13266448 0 0 Deletion 4 FN499-S Chr7 14221243 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN499-S Chr7 14677755 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g25600 expressed protein FN499-S Chr7 18088502 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN499-S Chr7 18088504 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN499-S Chr7 21808139 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN499-S Chr7 21808149 21808150 0 0 Deletion 1 FN499-S Chr8 11097979 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g18100 retrotransposon protein, putative, unclassified, expressed FN499-S Chr8 27113579 27113591 0 0 Deletion 12 FN499-S Chr8 8396479 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g14000 retrotransposon protein, putative, Ty1-copia subclass, expressed FN499-S Chr8 8396480 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g14000 retrotransposon protein, putative, Ty1-copia subclass, expressed FN499-S Chr9 13061771 13061771 0 0 Insertion 2 FN499-S Chr9 18045196 T-C 0 0 Single Base Substitution 0 INTRON HET FN499-S Chr9 22352886 C-T 0 0 Single Base Substitution 0 INTRON HET FN499-S Chr9 4125878 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g08010 retrotransposon protein, putative, unclassified, expressed FN499-S Chr9 4149028 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO