FN500-S Chr1 10200643 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN500-S Chr1 13256764 13256766 0 0 Deletion 2 FN500-S Chr1 20477927 20477927 0 0 Insertion 2 FN500-S Chr1 20605987 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN500-S Chr1 31112614 31112624 0 0 Deletion 10 LOC_Os01g54100 CK1_CaseinKinase_1a.2 - CK1 includes the casein kinase 1 kinases, expressed FN500-S Chr1 36024899 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN500-S Chr1 38721266 38721271 0 0 Deletion 5 FN500-S Chr10 17565810 A-T 0 0 Single Base Substitution 0 UTR_5_PRIME HOMO FN500-S Chr10 18154308 18155131 0 0 Deletion 823 LOC_Os10g34030 zinc finger, C3HC4 type domain containing protein, expressed FN500-S Chr10 18154310 Chr8 22345241 0 Translocation 0 LOC_Os10g34030 zinc finger, C3HC4 type domain containing protein, expressed FN500-S Chr10 18155121 Chr8 22345229 0 Translocation 0 LOC_Os10g34030 zinc finger, C3HC4 type domain containing protein, expressed FN500-S Chr10 18164096 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN500-S Chr10 18464856 18464859 0 0 Deletion 3 LOC_Os10g34650 retrotransposon protein, putative, unclassified, expressed FN500-S Chr10 3068228 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN500-S Chr11 21647543 21647641 0 0 Deletion 98 FN500-S Chr11 28696874 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN500-S Chr11 8059033 8059034 0 0 Deletion 1 LOC_Os11g14350 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN500-S Chr11 8067610 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN500-S Chr11 8329289 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g14790 retrotransposon protein, putative, unclassified, expressed FN500-S Chr2 18371365 18371365 0 0 Insertion 2 FN500-S Chr2 2009044 2009047 0 0 Deletion 3 LOC_Os02g04520 AGG2, putative, expressed FN500-S Chr3 23671316 23671316 0 0 Insertion 4 FN500-S Chr3 23974749 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN500-S Chr3 26980447 28567546 0 0 Inversion 1587099 LOC_Os03g47640 expressed protein FN500-S Chr3 26980447 28567546 0 0 Inversion 1587099 LOC_Os03g50090 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN500-S Chr3 27647108 27647110 0 0 Deletion 2 FN500-S Chr3 6221716 6221716 0 0 Insertion 2 FN500-S Chr4 14131663 14131666 0 0 Deletion 3 LOC_Os04g24600 cysteine proteinase 1 precursor, putative, expressed FN500-S Chr4 14131663 14131666 0 0 Deletion 3 LOC_Os04g24610 expressed protein FN500-S Chr4 16533213 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN500-S Chr4 1657653 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN500-S Chr4 17014022 17014022 0 0 Insertion 2 FN500-S Chr4 31148580 C-T 0 0 Single Base Substitution 0 INTRON HET FN500-S Chr4 4931435 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN500-S Chr5 12797453 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN500-S Chr5 17816448 17816454 0 0 Deletion 6 LOC_Os05g30750 anthranilate phosphoribosyltransferase, putative, expressed FN500-S Chr5 19058606 T-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN500-S Chr5 21635002 T-C 0 0 Single Base Substitution 0 INTRON HET FN500-S Chr5 26324331 T-A 0 0 Single Base Substitution 0 INTRON HET FN500-S Chr5 4474428 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN500-S Chr5 8226363 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN500-S Chr6 15626254 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN500-S Chr6 25243708 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN500-S Chr6 31125907 31125907 0 0 Insertion 1 FN500-S Chr7 1306469 G-A 0 0 Single Base Substitution 0 INTRON HET FN500-S Chr7 14916525 25799690 0 0 Inversion 10883165 LOC_Os07g26000 OsFBX235 - F-box domain containing protein, expressed FN500-S Chr7 14916525 25799690 0 0 Inversion 10883165 LOC_Os07g43060 transcription elongation factor SPT4 homolog 1, putative, expressed FN500-S Chr7 17309938 17309939 0 0 Deletion 1 FN500-S Chr7 21604472 21604482 0 0 Deletion 10 FN500-S Chr7 4332511 T-C 0 0 Single Base Substitution 0 INTRON HET FN500-S Chr7 5893720 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g10840 uncharacterized glycosyltransferase, putative, expressed FN500-S Chr8 12532302 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN500-S Chr8 2110265 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN500-S Chr8 26378130 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN500-S Chr8 550231 550232 0 0 Deletion 1 FN500-S Chr9 20421687 20421695 0 0 Deletion 8 FN500-S Chr9 20723919 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN500-S Chr9 22874562 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os09g39900 retrotransposon protein, putative, unclassified, expressed FN500-S Chr9 22890150 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN500-S Chr9 22897340 22897457 0 0 Deletion 117 LOC_Os09g39920 retrotransposon protein, putative, unclassified, expressed FN500-S Chr9 5025545 G-T 0 0 Single Base Substitution 0 INTRON HET FN500-S Chr9 5025546 A-T 0 0 Single Base Substitution 0 INTRON HET FN500-S Chr9 8226667 G-A 0 0 Single Base Substitution 0 INTERGENIC HET