FN516-S Chr1 19835487 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g35820 retrotransposon protein, putative, unclassified, expressed FN516-S Chr1 23798371 23798371 0 0 Insertion 2 FN516-S Chr1 33043083 33043090 0 0 Deletion 7 FN516-S Chr1 37220271 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN516-S Chr1 41045097 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN516-S Chr1 41045098 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN516-S Chr1 8578105 8578107 0 0 Deletion 2 FN516-S Chr10 19072193 19072198 0 0 Deletion 5 FN516-S Chr10 20683422 20683433 0 0 Deletion 11 LOC_Os10g38850 amine oxidase, putative, expressed FN516-S Chr11 21359831 21359838 0 0 Deletion 7 LOC_Os11g36280 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN516-S Chr11 534759 534760 0 0 Deletion 1 LOC_Os11g02000 retrotransposon protein, putative, unclassified, expressed FN516-S Chr11 705116 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN516-S Chr12 104274 104275 0 0 Deletion 1 FN516-S Chr12 12530356 T-G 0 0 Single Base Substitution 0 INTRON HET FN516-S Chr12 14422829 14422830 0 0 Deletion 1 FN516-S Chr12 15284221 Chr10 15776444 0 Translocation 0 FN516-S Chr12 2492560 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN516-S Chr12 24974101 24974102 0 0 Deletion 1 FN516-S Chr12 26312962 Chr1 3224674 0 Translocation 0 LOC_Os01g06790 disease resistance protein, putative, expressed FN516-S Chr12 26312962 Chr1 3224674 0 Translocation 0 LOC_Os12g42310 serine/threonine-protein phosphatase BSL2, putative, expressed FN516-S Chr12 26313138 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN516-S Chr12 8483827 8483831 0 0 Deletion 4 FN516-S Chr2 10799072 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN516-S Chr2 23040515 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN516-S Chr2 28081723 28081723 0 0 Insertion 2 LOC_Os02g46080 protein phosphatase 2C, putative, expressed FN516-S Chr2 34570884 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN516-S Chr2 35709209 35709217 0 0 Deletion 8 LOC_Os02g58390 inactive receptor kinase At2g26730 precursor, putative, expressed FN516-S Chr3 1257473 1257473 0 0 Insertion 2 FN516-S Chr3 13305340 13305346 0 0 Deletion 6 FN516-S Chr3 19525213 19525214 0 0 Deletion 1 FN516-S Chr3 20598633 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g37180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g42860 pentatricopeptide, putative, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g42870 hypothetical protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g42880 nucleotide-binding protein-like, putative, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g42890 retrotransposon protein, putative, unclassified, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g42900 KH domain containing protein, putative, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g42910 hypothetical protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g42920 expressed protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g42930 expressed protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g42950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g42954 conserved hypothetical protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g42960 expressed protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g42970 transposon protein, putative, unclassified, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g42990 hypothetical protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43000 expressed protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43010 expressed protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43020 prefoldin subunit, putative, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43030 expressed protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43040 retrotransposon protein, putative, unclassified, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43050 LTPL90 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43060 OsFBX96 - F-box domain containing protein, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43080 expressed protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43090 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43100 expressed protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43114 expressed protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43130 transposon protein, putative, unclassified FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43140 expressed protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43150 transposon protein, putative, unclassified, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43169 retrotransposon protein, putative, Ty3-gypsy subclass FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43180 transposon protein, putative, unclassified, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43200 retrotransposon protein, putative, unclassified, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43235 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43240 retrotransposon protein, putative, Ty3-gypsy subclass FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43270 retrotransposon protein, putative, unclassified, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43280 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43290 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43309 retrotransposon protein, putative, unclassified, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43330 keratin, type I cytoskeletal 9, putative, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43340 expressed protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43350 expressed protein FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43360 zinc finger, C3HC4 type domain containing protein, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43374 retrotransposon protein, putative, unclassified FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43390 F-box/LRR domain containing protein, putative, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43400 OsIAA11 - Auxin-responsive Aux/IAA gene family member, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43410 OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43420 single-stranded DNA-binding protein, putative, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43430 mttA/Hcf106 family protein, putative, expressed FN516-S Chr3 23900001 24240000 0 0 Deletion 340000 LOC_Os03g43440 CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN516-S Chr3 24973955 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN516-S Chr3 27564530 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN516-S Chr3 6822489 6822492 0 0 Deletion 3 FN516-S Chr3 6898053 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN516-S Chr4 21491348 21507701 0 0 Deletion 16353 LOC_Os04g35340 MrBTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH-related domain, expressed FN516-S Chr4 21491348 21507701 0 0 Deletion 16353 LOC_Os04g35370 MBTB5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN516-S Chr4 2562110 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN516-S Chr5 22077839 22077847 0 0 Deletion 8 FN516-S Chr5 3715296 3978384 0 0 Inversion 263088 FN516-S Chr5 3715307 3978388 0 0 Inversion 263081 FN516-S Chr5 7477545 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN516-S Chr6 15092324 15092328 0 0 Deletion 4 FN516-S Chr6 17519860 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN516-S Chr6 17520806 17520835 0 0 Deletion 29 FN516-S Chr6 1923390 1923416 0 0 Deletion 26 LOC_Os06g04480 expressed protein FN516-S Chr6 19547994 19547998 0 0 Deletion 4 LOC_Os06g33570 cyclic nucleotide-gated ion channel 1, putative, expressed FN516-S Chr6 20546556 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN516-S Chr6 22155024 22155029 0 0 Deletion 5 FN516-S Chr6 29443712 29443724 0 0 Deletion 12 LOC_Os06g48660 DEFL21 - Defensin and Defensin-like DEFL family, expressed FN516-S Chr6 29443712 29443724 0 0 Deletion 12 LOC_Os06g48665 expressed protein FN516-S Chr6 30883157 30883168 0 0 Deletion 11 FN516-S Chr7 13273979 13273984 0 0 Deletion 5 LOC_Os07g23485 expressed protein FN516-S Chr7 15160241 15160242 0 0 Deletion 1 FN516-S Chr7 15882759 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN516-S Chr7 18536161 18536161 0 0 Insertion 1 FN516-S Chr7 25789991 Chr2 19515455 0 Translocation 0 FN516-S Chr7 25791759 Chr2 19514790 0 Translocation 0 LOC_Os02g32860 poly synthetase 3, putative, expressed FN516-S Chr7 25791759 Chr2 19514790 0 Translocation 0 LOC_Os07g43040 heavy metal-associated domain containing protein, expressed FN516-S Chr7 5265487 Chr3 27165207 0 Translocation 0 LOC_Os07g09900 disease resistance protein RPM1, putative, expressed FN516-S Chr7 5741780 5741781 0 0 Deletion 1 FN516-S Chr7 7034618 7034619 0 0 Deletion 1 FN516-S Chr8 1389645 1389655 0 0 Deletion 10 FN516-S Chr8 21671913 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN516-S Chr8 24551095 24551108 0 0 Deletion 13 FN516-S Chr8 25528992 25529057 0 0 Deletion 65 FN516-S Chr8 25529486 25529490 0 0 Deletion 4 FN516-S Chr8 5845315 5845325 0 0 Deletion 10 FN516-S Chr9 22645323 G-T 0 0 Single Base Substitution 0 INTRON HET