FN527-S Chr1 12098997 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g21600 retrotransposon protein, putative, unclassified, expressed FN527-S Chr1 17296733 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN527-S Chr1 17296734 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN527-S Chr1 35644418 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN527-S Chr1 35732720 G-T 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN527-S Chr1 39197105 39197112 0 0 Deletion 7 FN527-S Chr1 4175352 A-C 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN527-S Chr10 10990262 10990268 0 0 Deletion 6 FN527-S Chr10 13655269 13655270 0 0 Deletion 1 FN527-S Chr10 18068185 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN527-S Chr10 18633148 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN527-S Chr10 19917525 19917530 0 0 Deletion 5 FN527-S Chr10 21401271 Chr3 1339820 0 Translocation 0 FN527-S Chr10 21401272 Chr3 1339821 0 Translocation 0 FN527-S Chr10 21980787 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN527-S Chr11 15197619 15197671 0 0 Deletion 52 LOC_Os11g26520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN527-S Chr11 20280413 A-C 0 0 Single Base Substitution 0 INTRON HOMO FN527-S Chr11 20393380 Chr7 18351882 0 Translocation 0 FN527-S Chr12 11911618 11911628 0 0 Deletion 10 FN527-S Chr12 26891193 Chr6 29363627 0 Translocation 0 LOC_Os06g48530 ZOS6-09 - C2H2 zinc finger protein, expressed FN527-S Chr12 26892440 Chr6 29363621 0 Translocation 0 LOC_Os06g48530 ZOS6-09 - C2H2 zinc finger protein, expressed FN527-S Chr12 3105927 3105927 0 0 Insertion 2 FN527-S Chr2 20954774 20954774 0 0 Insertion 1 FN527-S Chr2 21547214 21547215 0 0 Deletion 1 LOC_Os02g35860 expressed protein FN527-S Chr2 3616376 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN527-S Chr3 23647680 23647689 0 0 Deletion 9 FN527-S Chr3 25283597 25283608 0 0 Deletion 11 FN527-S Chr3 29008942 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN527-S Chr3 5512342 5512368 0 0 Deletion 26 LOC_Os03g10780 flap endonuclease, putative, expressed FN527-S Chr3 6755152 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g12670 expressed protein FN527-S Chr4 13961306 13961327 0 0 Deletion 21 FN527-S Chr4 29366190 29430906 0 0 Inversion 64716 FN527-S Chr4 29366201 29430906 0 0 Inversion 64705 FN527-S Chr4 35014994 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN527-S Chr4 3936280 3936286 0 0 Deletion 6 FN527-S Chr5 12405155 12405164 0 0 Deletion 9 LOC_Os05g21100 retrotransposon protein, putative, unclassified, expressed FN527-S Chr5 2954093 2954099 0 0 Deletion 6 LOC_Os05g05880 retrotransposon protein, putative, unclassified, expressed FN527-S Chr5 6920947 6920948 0 0 Deletion 1 FN527-S Chr6 1058965 1058972 0 0 Deletion 7 LOC_Os06g02880 retrotransposon protein, putative, unclassified, expressed FN527-S Chr6 13158510 13158578 0 0 Deletion 68 FN527-S Chr6 14806429 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN527-S Chr6 17227579 17227581 0 0 Deletion 2 FN527-S Chr6 23543748 23543748 0 0 Insertion 3 FN527-S Chr6 25468189 25468213 0 0 Deletion 24 LOC_Os06g42370 retrotransposon protein, putative, unclassified, expressed FN527-S Chr6 29157216 G-A 0 0 Single Base Substitution 0 INTRON HET FN527-S Chr6 29438362 G-A 0 0 Single Base Substitution 0 INTRON HET FN527-S Chr6 30084286 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN527-S Chr6 8418697 8418697 0 0 Insertion 2 FN527-S Chr7 17052441 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN527-S Chr7 3279299 3279300 0 0 Deletion 1 LOC_Os07g06720 expressed protein FN527-S Chr7 3788853 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN527-S Chr7 4565753 4565758 0 0 Deletion 5 FN527-S Chr8 11355202 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN527-S Chr8 13563587 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN527-S Chr8 18896048 18896049 0 0 Deletion 1 FN527-S Chr8 20352667 A-G 0 0 Single Base Substitution 0 INTRON HET FN527-S Chr8 7181384 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN527-S Chr9 13955001 13982000 0 0 Deletion 27000 LOC_Os09g23480 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN527-S Chr9 13955001 13982000 0 0 Deletion 27000 LOC_Os09g23490 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN527-S Chr9 13955001 13982000 0 0 Deletion 27000 LOC_Os09g23500 hypothetical protein FN527-S Chr9 13955001 13982000 0 0 Deletion 27000 LOC_Os09g23510 hypothetical protein FN527-S Chr9 16466586 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g27060 SNF2 family N-terminal domain containing protein, expressed FN527-S Chr9 16512845 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN527-S Chr9 17244941 17244959 0 0 Deletion 18 LOC_Os09g28380 hypothetical protein FN527-S Chr9 17292502 Chr1 3415554 0 Translocation 0 LOC_Os01g07240 expressed protein FN527-S Chr9 17292596 17293714 0 0 Inversion 1118 FN527-S Chr9 17293290 Chr1 3415552 0 Translocation 0 LOC_Os01g07240 expressed protein FN527-S Chr9 17293304 17734215 0 0 Inversion 440911 FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28410 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28420 alpha-amylase precursor, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28440 AP2 domain containing protein, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28450 paramyosin, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28460 xyloglucan fucosyltransferase, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28470 leucine-rich repeat family protein, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28480 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28489 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28500 EF hand family protein, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28510 EF hand family protein, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28520 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28530 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28540 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28550 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28560 protein phosphotase protein, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28570 zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28580 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28590 AGAP010609-PA, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28600 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28610 protein transport protein, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28620 gibberellin receptor GID1L2, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28630 gibberellin receptor, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28640 gibberellin receptor GID1L2, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28650 gibberellin receptor, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28660 gibberellin receptor GID1L2, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28670 retrotransposon protein, putative, unclassified, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28680 retrotransposon protein, putative, unclassified, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28690 gibberellin receptor GID1L2, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28700 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28710 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28720 alpha/beta hydrolase fold, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28730 gibberellin receptor GID1L2, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28740 gibberellin receptor GID1L2, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28750 gibberellin receptor GID1L2, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28760 CXE carboxylesterase, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28770 patatin, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28780 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28790 retrotransposon protein, putative, unclassified, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28800 hypothetical protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28810 RNA recognition motif containing protein, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28820 hypothetical protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28830 OsSCP42 - Putative Serine Carboxypeptidase homologue, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28840 OsSCP43 - Putative Serine Carboxypeptidase homologue, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28850 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28860 late embryogenesis abundant protein D-34, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28880 DUF617 domain containing protein, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28890 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28900 basic helix-loop-helix, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28910 carbonic anhydrase, chloroplast precursor, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28920 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28930 DNA binding protein, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28940 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28950 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28960 retrotransposon protein, putative, unclassified FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28970 retrotransposon protein, putative, unclassified, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28980 retrotransposon protein, putative, unclassified, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g28990 retrotransposon protein, putative, Ty3-gypsy subclass FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29000 retrotransposon protein, putative, Ty3-gypsy subclass FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29010 retrotransposon protein, putative, Ty3-gypsy subclass FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29020 retrotransposon protein, putative, unclassified, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29030 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29040 hypothetical protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29050 mitochondrial carrier protein, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29060 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29070 glucose-6-phosphate isomerase, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29080 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29090 retrotransposon protein, putative, unclassified, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29100 cyclin, putative, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29110 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29120 GRAM domain containing protein, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29130 ZF-HD protein dimerisation region containing protein, expressed FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29150 expressed protein FN527-S Chr9 17294001 17734000 0 0 Deletion 440000 LOC_Os09g29160 expressed protein FN527-S Chr9 19992001 20006000 0 0 Deletion 14000 LOC_Os09g33860 protein kinase, putative, expressed FN527-S Chr9 19992001 20006000 0 0 Deletion 14000 LOC_Os09g33870 RNA recognition motif containing protein, putative, expressed FN527-S Chr9 19992001 20006000 0 0 Deletion 14000 LOC_Os09g33876 expressed protein