FN539-S Chr1 37982606 37982611 0 0 Deletion 5 FN539-S Chr10 11449892 11449898 0 0 Deletion 6 FN539-S Chr10 13371095 Chr8 27373550 0 Translocation 0 FN539-S Chr10 17038778 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN539-S Chr10 22828473 22828477 0 0 Deletion 4 FN539-S Chr11 12580738 Chr8 22301621 0 Translocation 0 FN539-S Chr11 20880258 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN539-S Chr11 22477939 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN539-S Chr11 22477940 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN539-S Chr11 27826722 Chr6 25898116 0 Translocation 0 FN539-S Chr11 6474578 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN539-S Chr11 9734684 9734688 0 0 Deletion 4 FN539-S Chr12 16527532 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN539-S Chr12 16527533 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN539-S Chr12 19378289 19378291 0 0 Deletion 2 FN539-S Chr12 21610552 21610562 0 0 Deletion 10 FN539-S Chr12 21716327 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN539-S Chr12 26811303 Chr9 13285788 0 Translocation 0 FN539-S Chr12 26825883 Chr9 13285768 0 Translocation 0 LOC_Os12g43220 retrotransposon protein, putative, unclassified, expressed FN539-S Chr12 2879968 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN539-S Chr12 44204 Chr8 26841573 0 Translocation 0 LOC_Os08g42470 BEE 1, putative, expressed FN539-S Chr12 44204 Chr8 26841573 0 Translocation 0 LOC_Os12g01090 retrotransposon protein, putative, unclassified, expressed FN539-S Chr2 11929046 G-A 0 0 Single Base Substitution 0 INTRON HET FN539-S Chr2 13844802 13844809 0 0 Deletion 7 FN539-S Chr2 15096314 15616022 0 0 Inversion 519708 LOC_Os02g25770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN539-S Chr2 15096314 15616022 0 0 Inversion 519708 LOC_Os02g26600 ATP binding, related, putative, expressed FN539-S Chr2 1913396 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN539-S Chr2 1975125 1975134 0 0 Deletion 9 FN539-S Chr2 31361390 31361480 0 0 Deletion 90 FN539-S Chr3 26719696 26719698 0 0 Deletion 2 FN539-S Chr3 30806392 30806428 0 0 Deletion 36 LOC_Os03g53720 SRPK4, putative, expressed FN539-S Chr4 11770156 28892992 0 0 Inversion 17122836 LOC_Os04g20960 expressed protein FN539-S Chr4 11770156 28892992 0 0 Inversion 17122836 LOC_Os04g48460 cytochrome P450, putative, expressed FN539-S Chr4 11772300 28892959 0 0 Inversion 17120659 LOC_Os04g20960 expressed protein FN539-S Chr4 11772300 28892959 0 0 Inversion 17120659 LOC_Os04g48460 cytochrome P450, putative, expressed FN539-S Chr4 21053321 21053322 0 0 Deletion 1 FN539-S Chr4 25954076 25954082 0 0 Deletion 6 FN539-S Chr4 3131575 3131597 0 0 Deletion 22 FN539-S Chr5 1129427 T-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN539-S Chr5 13752886 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN539-S Chr5 17501828 17501832 0 0 Deletion 4 FN539-S Chr5 22032540 22032548 0 0 Deletion 8 FN539-S Chr5 23962002 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN539-S Chr5 27297752 27297753 0 0 Deletion 1 FN539-S Chr6 13780594 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN539-S Chr6 23060615 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN539-S Chr6 9172724 T-C 0 0 Single Base Substitution 0 INTRON HET FN539-S Chr7 15723486 15723487 0 0 Deletion 1 FN539-S Chr7 22317001 22367000 0 0 Deletion 50000 LOC_Os07g37240 chlorophyll A-B binding protein, putative, expressed FN539-S Chr7 22317001 22367000 0 0 Deletion 50000 LOC_Os07g37250 THYLAKOID FORMATION1, chloroplast precursor, putative, expressed FN539-S Chr7 22317001 22367000 0 0 Deletion 50000 LOC_Os07g37260 expressed protein FN539-S Chr7 22317001 22367000 0 0 Deletion 50000 LOC_Os07g37270 MSP domain containing protein, putative, expressed FN539-S Chr7 22317001 22367000 0 0 Deletion 50000 LOC_Os07g37280 hypothetical protein FN539-S Chr7 22317001 22367000 0 0 Deletion 50000 LOC_Os07g37290 expressed protein FN539-S Chr7 22317001 22367000 0 0 Deletion 50000 LOC_Os07g37300 expressed protein FN539-S Chr7 22317001 22367000 0 0 Deletion 50000 LOC_Os07g37310 uncharacterized secreted protein, putative, expressed FN539-S Chr7 22317001 22367000 0 0 Deletion 50000 LOC_Os07g37320 transporter family protein, putative, expressed FN539-S Chr7 22317001 22367000 0 0 Deletion 50000 LOC_Os07g37330 hypothetical protein FN539-S Chr7 845939 Chr2 1320217 0 Translocation 0 FN539-S Chr7 846098 Chr2 1320215 0 Translocation 0 FN539-S Chr8 10964025 10964042 0 0 Deletion 17 FN539-S Chr8 1898280 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN539-S Chr8 24760359 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN539-S Chr8 24760360 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN539-S Chr8 25412077 25412077 0 0 Insertion 2 FN539-S Chr9 16237157 16237159 0 0 Deletion 2 FN539-S Chr9 18614683 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN539-S Chr9 19508737 19508743 0 0 Deletion 6 FN539-S Chr9 19854037 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN539-S Chr9 22790578 22790588 0 0 Deletion 10 FN539-S Chr9 4178936 4178944 0 0 Deletion 8 FN539-S Chr9 4886363 5221610 0 0 Inversion 335247 LOC_Os09g09130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN539-S Chr9 8564478 8564536 0 0 Deletion 58