FN577-S Chr1 13515397 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN577-S Chr1 14371180 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os01g25402 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN577-S Chr1 30283151 30283151 0 0 Insertion 1 FN577-S Chr1 3098423 3098423 0 0 Insertion 4 LOC_Os01g06580 fasciclin domain containing protein, expressed FN577-S Chr10 11852717 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN577-S Chr10 4407351 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN577-S Chr10 4799114 4799115 0 0 Deletion 1 FN577-S Chr10 6116101 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN577-S Chr11 11292139 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g19590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN577-S Chr11 13055981 13056008 0 0 Deletion 27 FN577-S Chr11 15699376 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN577-S Chr11 1990921 1990923 0 0 Deletion 2 FN577-S Chr11 3749962 3749970 0 0 Deletion 8 FN577-S Chr11 7192664 7192664 0 0 Insertion 3 FN577-S Chr12 19957428 Chr7 26404006 0 Translocation 0 LOC_Os07g44180 OsRCI2-10 - Hydrophobic protein LTI6A, expressed FN577-S Chr12 19957657 Chr7 26404005 0 Translocation 0 LOC_Os07g44180 OsRCI2-10 - Hydrophobic protein LTI6A, expressed FN577-S Chr12 25298586 A-G 0 0 Single Base Substitution 0 INTRON HET FN577-S Chr12 25582608 Chr5 17617519 0 Translocation 0 LOC_Os05g30390 Os5bglu23 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, likely pseudogene in japonica, expressed FN577-S Chr12 3156629 3156634 0 0 Deletion 5 LOC_Os12g06520 bZIP transcription factor domain containing protein, expressed FN577-S Chr12 3377769 T-C 0 0 Single Base Substitution 0 INTRON HET FN577-S Chr2 14697459 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN577-S Chr2 16134161 16134163 0 0 Deletion 2 FN577-S Chr2 27838367 27838371 0 0 Deletion 4 LOC_Os02g45750 protein kinase domain containing protein, expressed FN577-S Chr2 27959590 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN577-S Chr2 30405654 30421271 0 0 Deletion 15617 LOC_Os02g49750 expressed protein FN577-S Chr2 30405654 30421271 0 0 Deletion 15617 LOC_Os02g49760 potassium transporter, putative, expressed FN577-S Chr2 31924975 31924996 0 0 Deletion 21 LOC_Os02g52160 LMBR1 integral membrane protein, putative, expressed FN577-S Chr2 34651490 34651496 0 0 Deletion 6 LOC_Os02g56565 endoribonuclease, putative, expressed FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16680 bZIP transcription factor domain containing protein, expressed FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16690 expressed protein FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16709 peptidase, putative, expressed FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16730 expansin precursor, putative, expressed FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16740 expressed protein FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16750 retrotransposon protein, putative, unclassified FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16760 OsFBX41 - F-box domain containing protein, expressed FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16770 expressed protein FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16780 expansin precursor, putative, expressed FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16790 inactive receptor kinase At2g26730 precursor, putative, expressed FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16800 expansin precursor, putative, expressed FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16809 expansin precursor, putative, expressed FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16820 glutelin, putative, expressed FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16830 glutelin, putative, expressed FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16839 expansin precursor, putative, expressed FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16850 expansin precursor, putative, expressed FN577-S Chr2 9536001 9608000 0 0 Deletion 72000 LOC_Os02g16860 retrotransposon protein, putative, unclassified, expressed FN577-S Chr3 10539950 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN577-S Chr3 17334041 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN577-S Chr3 21075681 21075682 0 0 Deletion 1 FN577-S Chr3 22919550 22919557 0 0 Deletion 7 FN577-S Chr3 23795379 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN577-S Chr3 23909876 T-A 0 0 Single Base Substitution 0 INTRON HET FN577-S Chr3 23909877 T-A 0 0 Single Base Substitution 0 INTRON HET FN577-S Chr3 23909882 C-T 0 0 Single Base Substitution 0 INTRON HET FN577-S Chr3 26037790 26037805 0 0 Deletion 15 FN577-S Chr3 4850550 4850551 0 0 Deletion 1 FN577-S Chr4 14765552 15513018 0 0 Inversion 747466 LOC_Os04g25470 retrotransposon protein, putative, unclassified, expressed FN577-S Chr4 14765552 15513018 0 0 Inversion 747466 LOC_Os04g26580 retrotransposon protein, putative, unclassified, expressed FN577-S Chr4 14863813 14863817 0 0 Deletion 4 LOC_Os04g25650 cysteine-rich receptor-like protein kinase, putative, expressed FN577-S Chr4 19912659 19912688 0 0 Deletion 29 FN577-S Chr4 4045825 4045827 0 0 Deletion 2 FN577-S Chr4 6024008 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN577-S Chr4 6677370 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN577-S Chr4 9619718 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN577-S Chr5 17318969 17338581 0 0 Inversion 19612 LOC_Os05g29930 late embryogenesis abundant protein, putative, expressed FN577-S Chr5 17318969 17338581 0 0 Inversion 19612 LOC_Os05g29974 lipase, putative, expressed FN577-S Chr5 28974835 A-T 0 0 Single Base Substitution 0 INTRON HET FN577-S Chr5 9146993 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN577-S Chr6 19946187 20018114 0 0 Inversion 71927 FN577-S Chr6 4765058 4765059 0 0 Deletion 1 FN577-S Chr6 5833829 5833832 0 0 Deletion 3 FN577-S Chr6 7778456 A-G 0 0 Single Base Substitution 0 INTRON HET FN577-S Chr7 11707017 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN577-S Chr7 16011360 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN577-S Chr7 17388919 17388921 0 0 Deletion 2 FN577-S Chr7 20031428 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN577-S Chr7 25471758 25471769 0 0 Deletion 11 FN577-S Chr7 28207992 28208198 0 0 Deletion 206 FN577-S Chr7 29087848 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN577-S Chr7 9371102 9371117 0 0 Deletion 15 LOC_Os07g16070 retrotransposon protein, putative, unclassified, expressed FN577-S Chr8 12962956 A-G 0 0 Single Base Substitution 0 INTRON HET FN577-S Chr8 13472797 13472810 0 0 Deletion 13 FN577-S Chr8 20764195 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN577-S Chr8 27676351 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN577-S Chr9 11852672 11852673 0 0 Deletion 1 FN577-S Chr9 20463280 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN577-S Chr9 2507736 A-G 0 0 Single Base Substitution 0 INTRON HET FN577-S Chr9 5338588 5338589 0 0 Deletion 1