FN590-S Chr1 17697160 A-G 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN590-S Chr1 19672210 19672212 0 0 Deletion 2 FN590-S Chr1 21920463 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN590-S Chr1 21920464 G-T 0 0 Single Base Substitution 0 INTRON HOMO FN590-S Chr1 22692909 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN590-S Chr1 35366162 T-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HOMO FN590-S Chr1 7195196 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN590-S Chr10 2214171 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN590-S Chr10 8759690 Chr7 14018404 0 Translocation 0 LOC_Os07g24640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN590-S Chr10 8759690 Chr7 14018404 0 Translocation 0 LOC_Os10g17380 retrotransposon protein, putative, unclassified FN590-S Chr11 16706602 16706616 0 0 Deletion 14 FN590-S Chr11 16708685 16708687 0 0 Deletion 2 FN590-S Chr11 18741258 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN590-S Chr11 18741259 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN590-S Chr11 18741260 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN590-S Chr12 10258420 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN590-S Chr12 16423269 C-T 0 0 Single Base Substitution 0 INTRON HET FN590-S Chr12 4128713 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN590-S Chr12 9480107 Chr5 4162888 0 Translocation 0 LOC_Os05g07730 retrotransposon protein, putative, unclassified, expressed FN590-S Chr12 9481296 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN590-S Chr2 17647050 17647080 0 0 Deletion 30 FN590-S Chr2 18305894 G-A 0 0 Single Base Substitution 0 INTRON HET FN590-S Chr2 21615690 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN590-S Chr2 2363295 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN590-S Chr2 7763376 7763376 0 0 Insertion 2 FN590-S Chr3 29014304 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN590-S Chr3 34991729 34991730 0 0 Deletion 1 FN590-S Chr3 35429939 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g62590 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed FN590-S Chr3 36148182 36148184 0 0 Deletion 2 FN590-S Chr3 5148691 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN590-S Chr4 21143987 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN590-S Chr5 1522741 C-T 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN590-S Chr5 22012289 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN590-S Chr5 25453919 25453938 0 0 Deletion 19 FN590-S Chr6 11059913 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g19410 retrotransposon protein, putative, unclassified, expressed FN590-S Chr6 19754515 20437542 0 0 Inversion 683027 FN590-S Chr6 3253742 3253743 0 0 Deletion 1 FN590-S Chr7 13142834 13142843 0 0 Deletion 9 FN590-S Chr7 13143299 13143303 0 0 Deletion 4 LOC_Os07g23320 retrotransposon protein, putative, unclassified FN590-S Chr7 15976466 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os07g27420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN590-S Chr7 21258052 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN590-S Chr7 24526284 Chr3 1144728 0 Translocation 0 LOC_Os07g40986 NAD dependent epimerase/dehydratase family protein, putative, expressed FN590-S Chr7 2654871 2654878 0 0 Deletion 7 FN590-S Chr7 4294052 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN590-S Chr8 1462721 1462739 0 0 Deletion 18 FN590-S Chr8 15776478 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN590-S Chr8 18356165 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g29854 RGH1A, putative, expressed FN590-S Chr8 2383557 2383560 0 0 Deletion 3 FN590-S Chr8 8677856 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN590-S Chr8 9129151 9129152 0 0 Deletion 1 FN590-S Chr9 7845392 G-A 0 0 Single Base Substitution 0 INTERGENIC HET