FN596-S Chr1 10388541 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN596-S Chr1 13754301 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g24400 retrotransposon protein, putative, unclassified, expressed FN596-S Chr1 18201074 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN596-S Chr1 25251061 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN596-S Chr1 33903729 33903730 0 0 Deletion 1 FN596-S Chr1 42750295 42750297 0 0 Deletion 2 FN596-S Chr10 20698640 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN596-S Chr10 3335015 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN596-S Chr10 6700856 6700864 0 0 Deletion 8 FN596-S Chr11 13354983 Chr8 13624692 0 Translocation 0 LOC_Os08g22650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr11 13354983 Chr8 13624692 0 Translocation 0 LOC_Os11g23200 retrotransposon protein, putative, unclassified, expressed FN596-S Chr11 1399635 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN596-S Chr12 1070334 1070341 0 0 Deletion 7 LOC_Os12g02910 glycosyl transferase, family 8, putative, expressed FN596-S Chr12 22870414 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN596-S Chr12 22870415 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN596-S Chr12 24394197 24394198 0 0 Deletion 1 FN596-S Chr12 7630023 7630024 0 0 Deletion 1 FN596-S Chr12 9074001 9104000 0 0 Deletion 30000 LOC_Os12g15920 laccase precursor protein, putative, expressed FN596-S Chr12 9074001 9104000 0 0 Deletion 30000 LOC_Os12g15930 retrotransposon, putative, centromere-specific, expressed FN596-S Chr12 9074001 9104000 0 0 Deletion 30000 LOC_Os12g15950 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN596-S Chr12 9074001 9104000 0 0 Deletion 30000 LOC_Os12g15960 CRP5 - Cysteine-rich family protein precursor, putative, expressed FN596-S Chr12 9074001 9104000 0 0 Deletion 30000 LOC_Os12g15980 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g15980 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g15990 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16000 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16010 sex determination protein tasselseed-2, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16020 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16030 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16060 retrotransposon protein, putative, Ty1-copia subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16070 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16080 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16100 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16110 transposon protein, putative, CACTA, En/Spm sub-class FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16120 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16130 transposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16160 CCT motif family protein, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16170 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16180 lipase, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16190 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16200 glutathione synthetase, chloroplast precursor, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16210 zinc finger family protein, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16220 nmrA-like family domain containing protein, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16230 exostosin, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16240 nmrA-like family domain containing protein, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16250 nmrA-like family domain containing protein, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16260 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16280 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16290 isoflavone reductase, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16300 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16310 retrotransposon, putative, centromere-specific, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16320 cytokinin inducible protein, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16330 retrotransposon protein, putative, Ty3-gypsy subclass FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16340 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16350 enoyl-CoA hydratase/isomerase family protein, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16360 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16370 retrotransposon protein, putative, unclassified FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16380 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16390 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16400 transposon protein, putative, CACTA, En/Spm sub-class FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16410 isoflavone reductase, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16420 transposon protein, putative, CACTA, En/Spm sub-class FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16430 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16440 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16450 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16460 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16470 hypothetical protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16480 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16490 transposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16500 transposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16510 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16520 wall-associated receptor kinase 3 precursor, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16524 glutaredoxin-C8 precursor, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16530 hypothetical protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16540 OsWAK124 - OsWAK receptor-like protein OsWAK-RLP, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16550 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16570 hypothetical protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16580 transposon protein, putative, CACTA, En/Spm sub-class FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16590 transposon protein, putative, Mariner sub-class, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16600 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16610 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16620 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16630 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16640 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16650 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16660 hypothetical protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16670 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16680 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16690 zinc finger, C3HC4 type domain containing protein, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16710 retrotransposon protein, putative, Ty1-copia subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16720 cytochrome P450 71A1, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16730 retrotransposon protein, putative, Ty1-copia subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16740 retrotransposon protein, putative, Ty1-copia subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16750 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16760 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16770 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16780 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16790 transposon protein, putative, CACTA, En/Spm sub-class FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16820 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16860 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16870 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16880 PROLM27 - Prolamin precursor, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16890 PROLM28 - Prolamin precursor, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16930 retrotransposon protein, putative, Ty3-gypsy subclass FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16950 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16960 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16970 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16980 retrotransposon protein, putative, unclassified FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g16990 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17000 retrotransposon protein, putative, unclassified FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17010 PROLM29 - Prolamin precursor, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17020 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17030 PROLM30 - Prolamin precursor, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17040 retrotransposon protein, putative, unclassified FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17050 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17060 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17070 radical SAM enzyme, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17080 pentatricopeptide, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17090 stripe rust resistance protein Yr10, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17100 retrotransposon protein, putative, Ty1-copia subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17110 retrotransposon protein, putative, Ty1-copia subclass FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17120 retrotransposon protein, putative, Ty1-copia subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17130 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17140 mla1, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17150 expressed protein FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17160 flavonol sulfotransferase, putative, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17190 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9107001 9846000 0 0 Deletion 739000 LOC_Os12g17200 hypothetical protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17230 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17240 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17250 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17260 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17270 transposon protein, putative, CACTA, En/Spm sub-class FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17280 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17310 prefoldin, putative, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17320 polyprenyl synthetase, putative, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17330 conserved hypothetical protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17340 CC-NBS-LRR resistance protein MLA13, putative, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17350 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17360 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17370 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17390 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17400 retrotransposon protein, putative, unclassified FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17410 NB-ARC domain containing protein, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17420 resistance protein, putative, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17424 retrotransposon protein, putative, unclassified FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17430 NBS-LRR disease resistance protein, putative, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17440 retrotransposon protein, putative, unclassified FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17450 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17460 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17470 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17480 MLA12, putative, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17490 stripe rust resistance protein Yr10, putative, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17500 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17520 conserved hypothetical protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17530 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17540 vignain precursor, putative, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17550 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17560 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17570 GDSL-like lipase/acylhydrolase, putative, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17580 retrotransposon protein, putative, unclassified FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17590 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17600 ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17610 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17620 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17630 retrotransposon protein, putative, unclassified FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17640 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17650 retrotransposon, putative, centromere-specific FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17660 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17670 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17680 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17690 retrotransposon protein, putative, unclassified, expressed FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17700 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17710 expressed protein FN596-S Chr12 9857001 10157000 0 0 Deletion 300000 LOC_Os12g17730 retrotransposon protein, putative, Ty3-gypsy subclass FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02790 C2 domain containing protein, expressed FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02800 AGAP001222-PA, putative, expressed FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02810 expressed protein FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02820 helix-loop-helix DNA-binding domain containing protein, expressed FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02830 ubiquitin-conjugating enzyme, putative, expressed FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02840 ras-related protein, putative, expressed FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02850 bifunctional protein folD, putative, expressed FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02860 glutamyl-tRNA synthetase, putative, expressed FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02870 glycine-rich protein 2, putative, expressed FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02880 expressed protein FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02890 peptidyl-prolyl cis-trans isomerase, putative, expressed FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02900 expressed protein FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02910 expressed protein FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02920 HVA22, putative, expressed FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02930 terpene synthase, putative, expressed FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02940 succinate dehydrogenase subunit 3, putative, expressed FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02950 pentatricopeptide, putative, expressed FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02960 histone deacetylase complex subunit SAP18, putative, expressed FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02970 expressed protein FN596-S Chr2 1059969 1168329 0 0 Deletion 108360 LOC_Os02g02980 MATE domain containing protein, expressed FN596-S Chr2 10843061 10843067 0 0 Deletion 6 FN596-S Chr2 14142985 14142990 0 0 Deletion 5 FN596-S Chr2 24115103 24115104 0 0 Deletion 1 FN596-S Chr2 32086780 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN596-S Chr2 717089 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN596-S Chr2 717100 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN596-S Chr2 717111 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN596-S Chr2 8950121 8950121 0 0 Insertion 2 FN596-S Chr3 11224141 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN596-S Chr3 2739175 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN596-S Chr3 36136483 36140436 0 0 Tandem-Duplication 3953 FN596-S Chr3 3641636 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN596-S Chr3 4975265 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN596-S Chr3 9064162 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN596-S Chr4 17266159 17266164 0 0 Deletion 5 FN596-S Chr4 25460027 25460028 0 0 Deletion 1 FN596-S Chr4 27097765 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN596-S Chr4 32766994 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN596-S Chr5 21526077 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN596-S Chr5 26868096 26868097 0 0 Deletion 1 FN596-S Chr6 19647295 19647329 0 0 Deletion 34 LOC_Os06g33770 retrotransposon, putative, centromere-specific FN596-S Chr6 23500335 23500335 0 0 Insertion 2 FN596-S Chr6 26843511 26843515 0 0 Deletion 4 LOC_Os06g44450 CCT/B-box zinc finger protein, putative, expressed FN596-S Chr7 14004292 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN596-S Chr7 4070881 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g08040 expressed protein FN596-S Chr7 5677114 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN596-S Chr7 7566255 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g13190 retrotransposon protein, putative, unclassified, expressed FN596-S Chr8 11770642 11770660 0 0 Deletion 18 FN596-S Chr8 15238874 15238874 0 0 Insertion 2 FN596-S Chr8 1725326 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN596-S Chr8 23421983 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN596-S Chr8 2869639 2869647 0 0 Deletion 8 LOC_Os08g05430 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN596-S Chr8 6044015 C-G 0 0 Single Base Substitution 0 INTRON HET FN596-S Chr9 19176353 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN596-S Chr9 21159465 21159465 0 0 Insertion 2 FN596-S Chr9 6024033 T-A 0 0 Single Base Substitution 0 INTRON HET