FN601-S Chr1 23678682 23678979 0 0 Deletion 297 FN601-S Chr1 40696310 40696314 0 0 Deletion 4 LOC_Os01g70270 auxin response factor, putative, expressed FN601-S Chr1 5304298 5304370 0 0 Deletion 72 FN601-S Chr10 11921231 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN601-S Chr10 13734465 13734467 0 0 Deletion 2 FN601-S Chr11 1660152 1660156 0 0 Deletion 4 FN601-S Chr11 2483444 2483454 0 0 Deletion 10 FN601-S Chr11 2725618 8617346 0 0 Inversion 5891728 FN601-S Chr11 8521001 8592000 0 0 Deletion 71000 LOC_Os11g15130 jasmonate O-methyltransferase, putative, expressed FN601-S Chr11 8521001 8592000 0 0 Deletion 71000 LOC_Os11g15140 retrotransposon, putative, centromere-specific, expressed FN601-S Chr11 8521001 8592000 0 0 Deletion 71000 LOC_Os11g15150 retrotransposon, putative, centromere-specific, expressed FN601-S Chr11 8521001 8592000 0 0 Deletion 71000 LOC_Os11g15170 transposon protein, putative, unclassified, expressed FN601-S Chr11 8521001 8592000 0 0 Deletion 71000 LOC_Os11g15180 SAM dependent carboxyl methyltransferase, putative, expressed FN601-S Chr11 8521001 8592000 0 0 Deletion 71000 LOC_Os11g15190 RGH1A, putative, expressed FN601-S Chr11 8521001 8592000 0 0 Deletion 71000 LOC_Os11g15200 expressed protein FN601-S Chr11 8521001 8592000 0 0 Deletion 71000 LOC_Os11g15210 anthocyanin regulatory Lc protein, putative, expressed FN601-S Chr11 8521001 8592000 0 0 Deletion 71000 LOC_Os11g15220 retrotransposon protein, putative, unclassified, expressed FN601-S Chr12 12777268 T-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN601-S Chr12 14056948 14056949 0 0 Deletion 1 FN601-S Chr12 2935132 2935146 0 0 Deletion 14 LOC_Os12g06190 expressed protein FN601-S Chr2 17326875 17326875 0 0 Insertion 2 FN601-S Chr2 18693542 18693543 0 0 Deletion 1 FN601-S Chr2 24912223 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN601-S Chr2 32476293 32476294 0 0 Deletion 1 FN601-S Chr2 33668084 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN601-S Chr3 10677023 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN601-S Chr3 15505659 15505660 0 0 Deletion 1 LOC_Os03g27080 calmodulin-binding transcription activator 2, putative, expressed FN601-S Chr3 19585872 A-G 0 0 Single Base Substitution 0 INTRON HET FN601-S Chr3 26963759 G-C 0 0 Single Base Substitution 0 INTRON HET FN601-S Chr3 33778499 A-G 0 0 Single Base Substitution 0 INTRON HET FN601-S Chr3 487107 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN601-S Chr3 905502 905502 0 0 Insertion 1 FN601-S Chr3 9607356 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g17240 ankyrin repeat-containing protein, putative, expressed FN601-S Chr4 16233734 16233735 0 0 Deletion 1 LOC_Os04g27450 hypothetical protein FN601-S Chr4 1908905 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN601-S Chr4 24319257 T-A 0 0 Single Base Substitution 0 INTRON HET FN601-S Chr4 25102166 A-G 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN601-S Chr4 28378448 28378451 0 0 Deletion 3 FN601-S Chr5 19510026 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN601-S Chr5 22337920 22337928 0 0 Deletion 8 FN601-S Chr5 2338785 2338785 0 0 Insertion 1 LOC_Os05g04860 agenet domain containing protein, putative, expressed FN601-S Chr5 5596276 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN601-S Chr5 7035034 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN601-S Chr6 12562345 12562355 0 0 Deletion 10 FN601-S Chr6 14838387 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN601-S Chr6 20406028 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN601-S Chr6 2721781 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN601-S Chr6 30067792 30067792 0 0 Insertion 1 FN601-S Chr6 5803341 5803344 0 0 Deletion 3 FN601-S Chr6 7522093 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN601-S Chr7 15243441 15243450 0 0 Deletion 9 FN601-S Chr7 20783800 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN601-S Chr7 22852358 22852368 0 0 Deletion 10 FN601-S Chr7 25496048 25496049 0 0 Deletion 1 FN601-S Chr7 26453306 26453315 0 0 Deletion 9 FN601-S Chr7 28848212 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN601-S Chr7 8495693 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN601-S Chr8 11108762 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN601-S Chr8 12389009 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN601-S Chr8 18376393 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN601-S Chr8 20974307 20974318 0 0 Deletion 11 LOC_Os08g33590 basic helix-loop-helix, putative, expressed FN601-S Chr9 15275024 15275027 0 0 Deletion 3 FN601-S Chr9 17325433 T-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN601-S Chr9 19002150 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN601-S Chr9 20751997 20752145 0 0 Deletion 148 LOC_Os09g36040 rhodanese-like domain containing protein, putative, expressed FN601-S Chr9 20847694 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN601-S Chr9 8941254 Chr1 30237199 0 Translocation 0