FN620-S Chr1 10636611 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr1 11359424 G-T 0 0 Single Base Substitution 0 INTRON HET FN620-S Chr1 14667206 14667214 0 0 Deletion 8 LOC_Os01g25860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN620-S Chr1 18456554 18456570 0 0 Deletion 16 FN620-S Chr1 18906859 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr1 18918164 18918175 0 0 Deletion 11 FN620-S Chr1 19431993 19431998 0 0 Deletion 5 LOC_Os01g35090 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN620-S Chr1 2233149 2233149 0 0 Insertion 4 FN620-S Chr1 29739083 29739097 0 0 Deletion 14 FN620-S Chr1 41727195 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr10 14834707 16345659 0 0 Inversion 1510952 LOC_Os10g28510 expressed protein FN620-S Chr10 14834720 16345693 0 0 Inversion 1510973 LOC_Os10g28510 expressed protein FN620-S Chr10 1538854 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr10 17185849 17487688 0 0 Inversion 301839 LOC_Os10g33290 tetratricopeptide repeat domain containing protein, expressed FN620-S Chr10 17475354 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr10 17851231 17851241 0 0 Deletion 10 LOC_Os10g33760 No apical meristem protein, putative, expressed FN620-S Chr10 19781574 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN620-S Chr10 20056173 20056174 0 0 Deletion 1 FN620-S Chr10 22547112 C-T 0 0 Single Base Substitution 0 INTRON HET FN620-S Chr10 4655410 4655412 0 0 Deletion 2 FN620-S Chr10 7299202 7299209 0 0 Deletion 7 FN620-S Chr10 8347260 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr10 8526813 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr11 14707582 14707583 0 0 Deletion 1 FN620-S Chr11 22164614 22164614 0 0 Insertion 1 LOC_Os11g37540 protein phosphatase 2C, putative, expressed FN620-S Chr11 24415987 24415987 0 0 Insertion 12 FN620-S Chr11 7978609 7978611 0 0 Deletion 2 FN620-S Chr11 9613216 9613216 0 0 Insertion 2 FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g02980 nucleoside-triphosphatase, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03000 retrotransposon protein, putative, unclassified, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03010 retrotransposon protein, putative, unclassified, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03020 transposon protein, putative, CACTA, En/Spm sub-class FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03030 conserved hypothetical protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03040 no apical meristem protein, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03050 no apical meristem protein, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03060 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03070 FHA domain containing protein, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03080 rp3 protein, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03090 ribosomal protein, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03094 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03100 exostosin family domain containing protein, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03110 ZF-HD protein dimerisation region containing protein, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03120 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03130 CDC45A - Putative DNA replication initiation protein, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03140 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03150 myb-like DNA-binding domain containing protein, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03160 transposon protein, putative, unclassified, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03170 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03180 Mad3/BUB1 homology region 1 domain containing protein, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03190 bifunctional aspartokinase/homoserine dehydrogenase, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03200 MATE efflux family protein, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03210 transposon protein, putative, Mariner sub-class, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03220 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03230 MATE efflux family protein, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03240 MATE efflux family protein, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03250 retrotransposon protein, putative, unclassified, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03260 MATE efflux family protein, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03270 ELMO/CED-12 family protein, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03290 AP2 domain containing protein, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03304 retrotransposon protein, putative, Ty1-copia subclass, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03320 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03330 hypothetical protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03340 protein of unknown function, DUF618 domain containing protein, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03350 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03360 EMB1379, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03370 harpin-induced protein 1 domain containing protein, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03380 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03390 OsFBX435 - F-box domain containing protein, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03400 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03410 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03420 VQ domain containing protein, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03430 Mpv17 / PMP22 family domain containing protein, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03440 OsFBX436 - F-box domain containing protein, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03450 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03470 alpha-N-arabinofuranosidase A, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03480 alpha-N-arabinofuranosidase, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03490 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03500 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03510 PME/invertase inhibitor, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03520 retrotransposon protein, putative, unclassified, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03530 alpha-N-arabinofuranosidase, putative, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03540 WD domain, G-beta repeat domain containing protein, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03554 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03580 expressed protein FN620-S Chr12 1110001 1440000 0 0 Deletion 330000 LOC_Os12g03594 OsFBX437 - F-box domain containing protein, expressed FN620-S Chr12 14970991 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr12 15722388 G-C 0 0 Single Base Substitution 0 INTRON HET FN620-S Chr12 16695549 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr12 2383063 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr12 3632266 3632266 0 0 Insertion 2 FN620-S Chr12 6948487 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr12 8908849 8908875 0 0 Deletion 26 FN620-S Chr12 9036015 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g15850 retrotransposon protein, putative, unclassified FN620-S Chr12 9477672 C-T 0 0 Single Base Substitution 0 INTRON HET FN620-S Chr2 10115465 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr2 10115466 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr2 30637734 A-T 0 0 Single Base Substitution 0 INTRON HET FN620-S Chr2 7763376 7763376 0 0 Insertion 2 FN620-S Chr3 11617468 11617469 0 0 Deletion 1 FN620-S Chr3 13905928 13905929 0 0 Deletion 1 LOC_Os03g24410 expressed protein FN620-S Chr3 19823641 19823645 0 0 Deletion 4 FN620-S Chr3 24421306 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr3 24570278 24745233 0 0 Inversion 174955 LOC_Os03g44020 AGC_PVPK_like_kin82y.9 - ACG kinases include homologs to PKA, PKG and PKC, expressed FN620-S Chr3 24900208 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr3 27219384 27219388 0 0 Deletion 4 FN620-S Chr3 34524547 34524552 0 0 Deletion 5 LOC_Os03g60730 transposon protein, putative, unclassified, expressed FN620-S Chr3 8188400 8188401 0 0 Deletion 1 FN620-S Chr4 13272462 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr4 13281011 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr4 14852637 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g25630 transposon protein, putative, CACTA, En/Spm sub-class FN620-S Chr4 18805512 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr4 20291590 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr4 33152051 33152065 0 0 Deletion 14 LOC_Os04g55700 exonuclease, putative, expressed FN620-S Chr4 7782454 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g13930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN620-S Chr4 8224758 G-T 0 0 Single Base Substitution 0 INTRON HET FN620-S Chr4 8224760 A-T 0 0 Single Base Substitution 0 INTRON HET FN620-S Chr5 10546516 14986716 0 0 Inversion 4440200 LOC_Os05g18294 SEC14 cytosolic factor family protein, putative, expressed FN620-S Chr5 10546529 14986724 0 0 Inversion 4440195 LOC_Os05g18294 SEC14 cytosolic factor family protein, putative, expressed FN620-S Chr5 12345929 12345952 0 0 Deletion 23 FN620-S Chr5 13920627 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr5 14448570 14448574 0 0 Deletion 4 FN620-S Chr5 1917247 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr5 1917248 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr5 21765747 21765747 0 0 Insertion 4 FN620-S Chr5 910959 912341 0 0 Deletion 1382 FN620-S Chr6 10129001 10140000 0 0 Deletion 11000 LOC_Os06g17460 fasciclin domain containing protein, expressed FN620-S Chr6 10129001 10140000 0 0 Deletion 11000 LOC_Os06g17470 expressed protein FN620-S Chr6 10129001 10140000 0 0 Deletion 11000 LOC_Os06g17480 histone-like transcription factor and archaeal histone, putative, expressed FN620-S Chr6 13121216 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr6 23019948 23019949 0 0 Deletion 1 LOC_Os06g38780 receptor-like protein kinase 2 precursor, putative, expressed FN620-S Chr6 23298482 23298485 0 0 Deletion 3 FN620-S Chr6 24496115 T-A 0 0 Single Base Substitution 0 INTRON HET FN620-S Chr6 2516831 2516832 0 0 Deletion 1 FN620-S Chr6 9815939 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr7 14515699 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr7 14515702 14515705 0 0 Deletion 3 FN620-S Chr7 19414380 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr7 3750283 Chr5 912310 0 Translocation 0 FN620-S Chr7 3750307 Chr5 910968 0 Translocation 0 FN620-S Chr7 400937 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr8 11442254 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr8 26389584 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN620-S Chr8 7156399 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g12140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN620-S Chr9 11029944 11029944 0 0 Insertion 1 FN620-S Chr9 13169499 13169500 0 0 Deletion 1 FN620-S Chr9 15503344 T-A 0 0 Single Base Substitution 0 INTRON HET FN620-S Chr9 15509014 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN620-S Chr9 20338033 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN620-S Chr9 2889146 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN620-S Chr9 4812695 G-T 0 0 Single Base Substitution 0 INTERGENIC HET