FN628-S Chr1 11963763 11963765 0 0 Deletion 2 FN628-S Chr1 27452066 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g47970 retrotransposon protein, putative, unclassified, expressed FN628-S Chr1 37254832 37254833 0 0 Deletion 1 FN628-S Chr1 40221326 G-C 0 0 Single Base Substitution 0 INTRON HOMO FN628-S Chr1 40807794 40817963 0 0 Deletion 10169 LOC_Os01g70460 expressed protein FN628-S Chr1 40807794 40817963 0 0 Deletion 10169 LOC_Os01g70470 expressed protein FN628-S Chr1 4210664 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN628-S Chr1 6887778 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN628-S Chr1 7568839 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN628-S Chr1 9478522 9478523 0 0 Deletion 1 FN628-S Chr10 16536709 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN628-S Chr10 21999716 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN628-S Chr12 14747631 14747632 0 0 Deletion 1 FN628-S Chr12 15291539 15291541 0 0 Deletion 2 FN628-S Chr12 16548552 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN628-S Chr12 16895887 16895887 0 0 Insertion 1 FN628-S Chr12 18944975 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN628-S Chr12 26515452 26515452 0 0 Insertion 1 FN628-S Chr12 5480418 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN628-S Chr12 9473506 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN628-S Chr2 10074660 10074661 0 0 Deletion 1 LOC_Os02g17500 transporter family protein, putative, expressed FN628-S Chr2 14987427 14987427 0 0 Insertion 1 FN628-S Chr2 6305381 6305387 0 0 Deletion 6 LOC_Os02g12120 retrotransposon protein, putative, unclassified, expressed FN628-S Chr4 10955230 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN628-S Chr4 5452302 5452304 0 0 Deletion 2 LOC_Os04g10100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN628-S Chr4 7732330 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN628-S Chr4 9616705 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g17600 retrotransposon, putative, centromere-specific, expressed FN628-S Chr4 9617010 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN628-S Chr5 13862343 13862351 0 0 Deletion 8 LOC_Os05g24050 retrotransposon protein, putative, unclassified, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24080 hypothetical protein FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24090 retrotransposon protein, putative, unclassified, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24100 retrotransposon protein, putative, unclassified, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24110 retrotransposon protein, putative, unclassified, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24120 retrotransposon protein, putative, unclassified, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24140 tetracycline transporter-like protein 1, putative, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24150 tetratricopeptide-like helical, putative, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24160 double-stranded RNA binding motif containing protein, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24170 retrotransposon protein, putative, unclassified, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24180 retrotransposon, putative, centromere-specific FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24190 retrotransposon protein, putative, Ty1-copia subclass, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24200 retrotransposon protein, putative, unclassified, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24210 expressed protein FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24220 retrotransposon protein, putative, Ty1-copia subclass FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24230 hypothetical protein FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24240 retrotransposon protein, putative, unclassified, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24260 expressed protein FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24270 PPR repeat domain containing protein, putative, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24280 expressed protein FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24340 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24350 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN628-S Chr5 13878529 14088205 0 0 Deletion 209676 LOC_Os05g24360 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN628-S Chr5 16646634 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g28430 transposon protein, putative, CACTA, En/Spm sub-class FN628-S Chr5 17757064 C-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN628-S Chr6 10772157 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g18950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN628-S Chr6 17183083 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN628-S Chr6 17941033 T-A 0 0 Single Base Substitution 0 INTRON HET FN628-S Chr6 19518506 19518507 0 0 Deletion 1 FN628-S Chr6 22373636 Chr1 40807934 0 Translocation 0 LOC_Os01g70460 expressed protein FN628-S Chr6 23002357 23002358 0 0 Deletion 1 FN628-S Chr6 5970837 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN628-S Chr6 6663467 Chr2 24434859 0 Translocation 0 LOC_Os02g40340 expressed protein FN628-S Chr6 7410395 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN628-S Chr7 14654050 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN628-S Chr7 1580722 1580728 0 0 Deletion 6 FN628-S Chr7 20922143 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN628-S Chr7 25640811 25640819 0 0 Deletion 8 FN628-S Chr7 5716352 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN628-S Chr7 6368225 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN628-S Chr8 10131544 10131544 0 0 Insertion 2 FN628-S Chr8 19852153 19852159 0 0 Deletion 6 LOC_Os08g32000 expressed protein FN628-S Chr8 3662755 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN628-S Chr8 4722612 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN628-S Chr9 11260066 T-A 0 0 Single Base Substitution 0 INTRON HET FN628-S Chr9 19638827 19638827 0 0 Insertion 2 FN628-S Chr9 22888803 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN628-S Chr9 3058266 3058273 0 0 Deletion 7 FN628-S Chr9 5916052 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN628-S Chr9 8941257 Chr1 30237200 0 Translocation 0