FN661-S Chr1 11216331 11216344 0 0 Deletion 13 FN661-S Chr1 17744831 17744837 0 0 Deletion 6 FN661-S Chr1 29659695 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr1 3255489 3255499 0 0 Deletion 10 FN661-S Chr1 33168930 33168938 0 0 Deletion 8 LOC_Os01g57370 cyclic nucleotide-gated ion channel 2, putative, expressed FN661-S Chr1 33225716 T-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN661-S Chr1 35028266 35028273 0 0 Deletion 7 FN661-S Chr1 35128175 35128182 0 0 Deletion 7 FN661-S Chr1 35131919 35131922 0 0 Deletion 3 FN661-S Chr1 39558652 39558652 0 0 Insertion 1 FN661-S Chr1 39881940 A-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN661-S Chr1 39890875 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr1 577511 577516 0 0 Deletion 5 LOC_Os01g02060 TOO MANY MOUTHS precursor, putative, expressed FN661-S Chr1 9991572 9991574 0 0 Deletion 2 LOC_Os01g17360 retrotransposon protein, putative, unclassified, expressed FN661-S Chr10 249258 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr10 4490047 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN661-S Chr11 22058255 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr11 25763332 25763332 0 0 Insertion 4 FN661-S Chr11 28809496 28809497 0 0 Deletion 1 LOC_Os11g47770 selT/selW/selH selenoprotein domain containing protein, expressed FN661-S Chr11 6927431 Chr7 19968670 0 Translocation 0 LOC_Os11g12410 serpin domain containing protein, putative, expressed FN661-S Chr12 10521026 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr12 14668210 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr12 15943162 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr12 17582163 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr12 20141285 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr12 25778826 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr12 9931646 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr2 11392242 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr2 15646552 15646552 0 0 Insertion 1 FN661-S Chr2 20729150 T-C 0 0 Single Base Substitution 0 INTRON HET FN661-S Chr2 24752663 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN661-S Chr2 32222750 32222764 0 0 Deletion 14 FN661-S Chr2 5001895 5001896 0 0 Deletion 1 FN661-S Chr2 5668786 5767378 0 0 Inversion 98592 FN661-S Chr2 6475396 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN661-S Chr3 10703114 G-T 0 0 Single Base Substitution 0 INTRON HOMO FN661-S Chr3 1782730 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr3 2032542 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g04410 aconitate hydratase protein, putative, expressed FN661-S Chr3 2046957 2046960 0 0 Deletion 3 FN661-S Chr3 29419488 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr3 29998917 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr4 12977157 12977162 0 0 Deletion 5 FN661-S Chr4 13562969 13562972 0 0 Deletion 3 FN661-S Chr4 13685367 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN661-S Chr4 18500952 18500954 0 0 Deletion 2 FN661-S Chr4 22070835 C-T 0 0 Single Base Substitution 0 INTRON HET FN661-S Chr4 25834734 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN661-S Chr5 10377689 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr5 17106249 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g29120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN661-S Chr5 17295833 17425349 0 0 Inversion 129516 LOC_Os05g29880 3-hydroxyacyl-CoA dehydrogenase, putative, expressed FN661-S Chr5 17295833 17425349 0 0 Inversion 129516 LOC_Os05g30100 retrotransposon protein, putative, unclassified, expressed FN661-S Chr5 17296001 17356000 0 0 Deletion 60000 LOC_Os05g29880 3-hydroxyacyl-CoA dehydrogenase, putative, expressed FN661-S Chr5 17296001 17356000 0 0 Deletion 60000 LOC_Os05g29900 expressed protein FN661-S Chr5 17296001 17356000 0 0 Deletion 60000 LOC_Os05g29910 retrotransposon protein, putative, unclassified, expressed FN661-S Chr5 17296001 17356000 0 0 Deletion 60000 LOC_Os05g29920 expressed protein FN661-S Chr5 17296001 17356000 0 0 Deletion 60000 LOC_Os05g29930 late embryogenesis abundant protein, putative, expressed FN661-S Chr5 17296001 17356000 0 0 Deletion 60000 LOC_Os05g29940 expressed protein FN661-S Chr5 17296001 17356000 0 0 Deletion 60000 LOC_Os05g29950 expressed protein FN661-S Chr5 17296001 17356000 0 0 Deletion 60000 LOC_Os05g29960 expressed protein FN661-S Chr5 17296001 17356000 0 0 Deletion 60000 LOC_Os05g29974 lipase, putative, expressed FN661-S Chr5 17296001 17356000 0 0 Deletion 60000 LOC_Os05g29990 NAD dependent epimerase/dehydratase family domain containing protein, expressed FN661-S Chr5 17296001 17356000 0 0 Deletion 60000 LOC_Os05g30000 expressed protein FN661-S Chr5 17355916 17399474 0 0 Inversion 43558 LOC_Os05g30070 retrotransposon protein, putative, unclassified, expressed FN661-S Chr5 17427001 17520000 0 0 Deletion 93000 LOC_Os05g30110 retrotransposon protein, putative, unclassified FN661-S Chr5 17427001 17520000 0 0 Deletion 93000 LOC_Os05g30120 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN661-S Chr5 17427001 17520000 0 0 Deletion 93000 LOC_Os05g30130 chaperone protein dnaJ 49, putative, expressed FN661-S Chr5 17427001 17520000 0 0 Deletion 93000 LOC_Os05g30140 RNA recognition motif containing protein, expressed FN661-S Chr5 17427001 17520000 0 0 Deletion 93000 LOC_Os05g30150 amino acid transporter family protein, putative, expressed FN661-S Chr5 17427001 17520000 0 0 Deletion 93000 LOC_Os05g30160 expressed protein FN661-S Chr5 17427001 17520000 0 0 Deletion 93000 LOC_Os05g30170 transposon protein, putative, unclassified, expressed FN661-S Chr5 17427001 17520000 0 0 Deletion 93000 LOC_Os05g30180 hypothetical protein FN661-S Chr5 17427001 17520000 0 0 Deletion 93000 LOC_Os05g30190 phytochrome A-associated F-box protein, putative, expressed FN661-S Chr5 17427001 17520000 0 0 Deletion 93000 LOC_Os05g30200 expressed protein FN661-S Chr5 17427001 17520000 0 0 Deletion 93000 LOC_Os05g30210 expressed protein FN661-S Chr5 17427001 17520000 0 0 Deletion 93000 LOC_Os05g30220 disease resistance RPP13-like protein 1, putative, expressed FN661-S Chr5 3290122 3290149 0 0 Deletion 27 FN661-S Chr6 20760651 20760658 0 0 Deletion 7 FN661-S Chr6 24105093 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN661-S Chr7 18929295 18929308 0 0 Deletion 13 LOC_Os07g31850 zinc finger, C3HC4 type domain containing protein, expressed FN661-S Chr7 21461588 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN661-S Chr7 23902626 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr7 27881074 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN661-S Chr7 27881075 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g46650 transposon protein, putative, unclassified, expressed FN661-S Chr7 28002985 T-C 0 0 Single Base Substitution 0 INTRON HET FN661-S Chr7 28079548 28079563 0 0 Deletion 15 FN661-S Chr7 28957888 28957891 0 0 Deletion 3 LOC_Os07g48420 expressed protein FN661-S Chr8 17004818 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr8 2913662 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN661-S Chr8 8968715 8968716 0 0 Deletion 1 LOC_Os08g14880 transposon protein, putative, unclassified, expressed FN661-S Chr9 10403603 10403603 0 0 Insertion 2 FN661-S Chr9 10938087 11298647 0 0 Inversion 360560 LOC_Os09g17880 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN661-S Chr9 11031746 11034348 0 0 Deletion 2602 LOC_Os09g18020 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN661-S Chr9 11320978 Chr3 16003407 0 Translocation 0 LOC_Os03g27860 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN661-S Chr9 11320978 Chr3 16003407 0 Translocation 0 LOC_Os09g18470 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed FN661-S Chr9 12640234 12640236 0 0 Deletion 2 FN661-S Chr9 16995229 16995251 0 0 Deletion 22 LOC_Os09g27970 expressed protein FN661-S Chr9 18935366 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN661-S Chr9 20112768 20112775 0 0 Deletion 7 LOC_Os09g34070 RNA recognition motif containing protein, expressed FN661-S Chr9 21552131 Chr2 34253001 0 Translocation 0 LOC_Os09g37310 retrotransposon protein, putative, unclassified, expressed FN661-S Chr9 7646145 Chr1 29297423 0 Translocation 0 FN661-S Chr9 7887765 Chr4 20185757 0 Translocation 0 FN661-S Chr9 7887773 Chr4 20184788 0 Translocation 0 FN661-S Chr9 8347164 8347173 0 0 Deletion 9