FN666-S Chr1 11759489 C-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN666-S Chr1 12652676 12652685 0 0 Deletion 9 FN666-S Chr1 19850450 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN666-S Chr1 25711129 25711139 0 0 Deletion 10 LOC_Os01g45290 retrotransposon protein, putative, unclassified, expressed FN666-S Chr1 2665738 C-A 0 0 Single Base Substitution 0 INTRON HET FN666-S Chr1 27468427 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN666-S Chr1 33239498 33239507 0 0 Deletion 9 FN666-S Chr1 34474204 T-G 0 0 Single Base Substitution 0 INTRON HET FN666-S Chr1 8397964 8397965 0 0 Deletion 1 LOC_Os01g14980 RPA3 - Putative single-stranded DNA binding complex subunit 3, expressed FN666-S Chr1 9982534 9982548 0 0 Deletion 14 FN666-S Chr11 14501406 Chr2 2772533 0 Translocation 0 LOC_Os02g05670 expressed protein FN666-S Chr11 14501406 Chr2 2772533 0 Translocation 0 LOC_Os11g25440 expressed protein FN666-S Chr11 15180057 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN666-S Chr11 15427029 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN666-S Chr11 23420110 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN666-S Chr11 2452517 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN666-S Chr11 2452519 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN666-S Chr11 28782639 28782641 0 0 Deletion 2 FN666-S Chr11 7665351 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN666-S Chr12 21233040 Chr1 30567628 0 Translocation 0 LOC_Os12g34874 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed FN666-S Chr12 21236676 Chr1 30567610 0 Translocation 0 FN666-S Chr12 8362675 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN666-S Chr12 9751985 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN666-S Chr2 11584001 11747000 0 0 Deletion 163000 LOC_Os02g19820 nodulin MtN3 family protein, putative, expressed FN666-S Chr2 11584001 11747000 0 0 Deletion 163000 LOC_Os02g19830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN666-S Chr2 11584001 11747000 0 0 Deletion 163000 LOC_Os02g19840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN666-S Chr2 11584001 11747000 0 0 Deletion 163000 LOC_Os02g19850 hAT dimerisation domain-containing protein, putative, expressed FN666-S Chr2 11584001 11747000 0 0 Deletion 163000 LOC_Os02g19860 pre-mRNA-splicing factor ATP-dependent RNA helicase, putative, expressed FN666-S Chr2 11584001 11747000 0 0 Deletion 163000 LOC_Os02g19880 expressed protein FN666-S Chr2 11584001 11747000 0 0 Deletion 163000 LOC_Os02g19890 stripe rust resistance protein Yr10, putative, expressed FN666-S Chr2 11584001 11747000 0 0 Deletion 163000 LOC_Os02g19900 expressed protein FN666-S Chr2 11584001 11747000 0 0 Deletion 163000 LOC_Os02g19924 aminotransferase, classes I and II, domain containing protein, expressed FN666-S Chr2 11584001 11747000 0 0 Deletion 163000 LOC_Os02g19950 expressed protein FN666-S Chr2 11584001 11747000 0 0 Deletion 163000 LOC_Os02g19960 transposon protein, putative, unclassified, expressed FN666-S Chr2 12353499 12353499 0 0 Insertion 4 FN666-S Chr2 21370566 21370567 0 0 Deletion 1 FN666-S Chr2 22811761 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN666-S Chr2 25522117 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN666-S Chr2 32737958 32999434 0 0 Inversion 261476 LOC_Os02g53520 kinesin motor domain containing protein, putative, expressed FN666-S Chr2 32737975 32771281 0 0 Inversion 33306 LOC_Os02g53520 kinesin motor domain containing protein, putative, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53570 DEFL74 - Defensin and Defensin-like DEFL family, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53580 expressed protein FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53590 DEFL71 - Defensin and Defensin-like DEFL family, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53600 DEFL75 - Defensin and Defensin-like DEFL family, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53610 retrotransposon protein, putative, Ty1-copia subclass, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53620 nuclear transcription factor Y subunit, putative, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53630 retrotransposon protein, putative, unclassified, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53640 retrotransposon protein, putative, unclassified, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53660 expressed protein FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53670 MYB family transcription factor, putative, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53680 RPA1A - Putative single-stranded DNA binding complex subunit 1, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53690 growth regulating factor protein, putative, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53700 DENN domain containing protein, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53710 expressed protein FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53720 phytosulfokine receptor precursor, putative, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53730 expressed protein FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53740 XI-I, putative, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53750 tyrosine protein kinase domain containing protein, putative, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53770 tRNA synthetase class I, putative, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53780 expressed protein FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53790 adenylate kinase, putative, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53800 hypothetical protein FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53810 expressed protein FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53820 endoglucanase, putative, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53830 MTD1, putative, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53835 expressed protein FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53840 subtilisin N-terminal Region family protein, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53850 OsSub21 - Putative Subtilisin homologue, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53860 OsSub22 - Putative Subtilisin homologue, expressed FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53870 expressed protein FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53880 expressed protein FN666-S Chr2 32771280 32999437 0 0 Deletion 228157 LOC_Os02g53890 expressed protein FN666-S Chr2 475052 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN666-S Chr2 8470659 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g15190 retrotransposon protein, putative, unclassified, expressed FN666-S Chr2 8470660 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN666-S Chr2 9139951 11583748 0 0 Inversion 2443797 LOC_Os02g16060 RGA-1, putative, expressed FN666-S Chr2 9140001 9157000 0 0 Deletion 17000 LOC_Os02g16060 RGA-1, putative, expressed FN666-S Chr2 9140001 9157000 0 0 Deletion 17000 LOC_Os02g16070 lr1 disease resistance protein, putative, expressed FN666-S Chr2 9140001 9157000 0 0 Deletion 17000 LOC_Os02g16080 retrotransposon protein, putative, unclassified, expressed FN666-S Chr2 9140001 9157000 0 0 Deletion 17000 LOC_Os02g16090 retrotransposon protein, putative, LINE subclass, expressed FN666-S Chr2 9156687 11850795 0 0 Inversion 2694108 LOC_Os02g16090 retrotransposon protein, putative, LINE subclass, expressed FN666-S Chr2 9156687 11850795 0 0 Inversion 2694108 LOC_Os02g20110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN666-S Chr2 9158504 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g16090 retrotransposon protein, putative, LINE subclass, expressed FN666-S Chr3 13971887 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN666-S Chr3 2505440 2505442 0 0 Deletion 2 FN666-S Chr3 36197599 36197600 0 0 Deletion 1 FN666-S Chr4 21904148 A-C 0 0 Single Base Substitution 0 INTRON HET FN666-S Chr4 21910130 21910131 0 0 Deletion 1 FN666-S Chr4 23665718 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g39710 retrotransposon protein, putative, unclassified, expressed FN666-S Chr4 9034764 9034764 0 0 Insertion 1 FN666-S Chr5 11348848 11348850 0 0 Deletion 2 FN666-S Chr5 16367145 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN666-S Chr5 18656884 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN666-S Chr5 21202454 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g35710 coiled-coil domain-containing protein 47 precursor, putative, expressed FN666-S Chr5 27658636 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN666-S Chr6 14004467 14004487 0 0 Deletion 20 FN666-S Chr6 14631535 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN666-S Chr6 15087664 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN666-S Chr6 16917794 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN666-S Chr6 23632293 23632293 0 0 Insertion 4 FN666-S Chr6 2421030 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN666-S Chr6 5533460 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN666-S Chr6 9081923 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN666-S Chr7 12482280 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN666-S Chr7 21865245 G-C 0 0 Single Base Substitution 0 INTRON HOMO FN666-S Chr7 24144354 24144355 0 0 Deletion 1 FN666-S Chr7 27080272 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os07g45400 expressed protein FN666-S Chr7 4047211 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN666-S Chr7 5578623 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN666-S Chr7 6543809 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN666-S Chr8 11544627 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN666-S Chr8 13480939 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN666-S Chr8 13480943 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN666-S Chr8 20862704 20862772 0 0 Deletion 68 FN666-S Chr8 22605231 22605232 0 0 Deletion 1 FN666-S Chr8 23418007 23418015 0 0 Deletion 8 LOC_Os08g37050 gibberellin receptor GID1L2, putative, expressed FN666-S Chr8 24789038 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO