FN684-S Chr1 17673962 17675372 0 0 Deletion 1410 FN684-S Chr1 1782530 1782566 0 0 Deletion 36 FN684-S Chr1 26042230 26042235 0 0 Deletion 5 FN684-S Chr1 27753968 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN684-S Chr1 290262 290263 0 0 Deletion 1 FN684-S Chr1 31837854 31837866 0 0 Deletion 12 FN684-S Chr1 31995305 T-G 0 0 Single Base Substitution 0 INTRON HOMO FN684-S Chr1 4372484 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN684-S Chr1 5674041 5674041 0 0 Insertion 1 FN684-S Chr1 6858106 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g12490 flavin monooxygenase, putative, expressed FN684-S Chr1 6858107 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g12490 flavin monooxygenase, putative, expressed FN684-S Chr10 15524602 15524611 0 0 Deletion 9 LOC_Os10g29880 expressed protein FN684-S Chr10 17280677 T-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN684-S Chr10 19390956 A-T 0 0 Single Base Substitution 0 INTRON HET FN684-S Chr10 2998740 Chr1 37755113 0 Translocation 0 FN684-S Chr10 4747623 4747624 0 0 Deletion 1 FN684-S Chr10 4747842 4747844 0 0 Deletion 2 FN684-S Chr10 8242098 8242098 0 0 Insertion 6 FN684-S Chr10 9145501 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g18042 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN684-S Chr11 12280851 12304550 0 0 Inversion 23699 FN684-S Chr11 23739833 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN684-S Chr11 27585620 27585620 0 0 Insertion 2 FN684-S Chr11 8567408 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN684-S Chr12 17167341 17167342 0 0 Deletion 1 FN684-S Chr12 21129620 21129621 0 0 Deletion 1 FN684-S Chr12 3493385 3493386 0 0 Deletion 1 FN684-S Chr12 4221108 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g08290 U-box domain containing protein, putative, expressed FN684-S Chr2 13178508 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN684-S Chr2 16481609 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN684-S Chr2 20713530 20713548 0 0 Deletion 18 LOC_Os02g34550 transposon protein, putative, unclassified, expressed FN684-S Chr2 34048888 34048895 0 0 Deletion 7 FN684-S Chr3 15498183 15498196 0 0 Deletion 13 FN684-S Chr3 15921528 15921529 0 0 Deletion 1 FN684-S Chr3 192297 192300 0 0 Deletion 3 FN684-S Chr3 19236403 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN684-S Chr3 2735216 2735216 0 0 Insertion 5 FN684-S Chr3 30557064 30557067 0 0 Deletion 3 FN684-S Chr4 10967440 10967444 0 0 Deletion 4 LOC_Os04g19660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN684-S Chr4 14560348 14560367 0 0 Deletion 19 FN684-S Chr4 14882615 14882776 0 0 Deletion 161 FN684-S Chr4 18982386 18982387 0 0 Deletion 1 FN684-S Chr4 27611250 27611268 0 0 Deletion 18 FN684-S Chr4 31709402 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN684-S Chr5 11015989 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g18980 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN684-S Chr5 12103672 12103673 0 0 Deletion 1 FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g20914 expressed protein FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g20920 retrotransposon, putative, centromere-specific, expressed FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g20930 ZOS5-07 - C2H2 zinc finger protein, expressed FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g20940 retrotransposon protein, putative, Ty3-gypsy subclass FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g20950 retrotransposon protein, putative, unclassified, expressed FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g20954 retrotransposon protein, putative, unclassified, expressed FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g20960 retrotransposon protein, putative, Ty3-gypsy subclass FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g20970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g20980 transposable element protein, putative, containing Pfam profile: PF03004, Transposase_24, expressed FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g20990 retrotransposon protein, putative, Ty3-gypsy subclass FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g21000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g21010 retrotransposon protein, putative, Ty3-gypsy subclass FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g21020 retrotransposon protein, putative, unclassified, expressed FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g21030 retrotransposon protein, putative, unclassified FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g21040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g21050 retrotransposon protein, putative, unclassified, expressed FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g21060 expressed protein FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g21080 retrotransposon, putative, centromere-specific, expressed FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g21090 retrotransposon protein, putative, unclassified FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g21100 retrotransposon protein, putative, unclassified, expressed FN684-S Chr5 12283001 12417000 0 0 Deletion 134000 LOC_Os05g21110 retrotransposon protein, putative, unclassified, expressed FN684-S Chr5 14365635 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN684-S Chr5 16090513 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN684-S Chr5 17519333 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN684-S Chr5 2983810 2983812 0 0 Deletion 2 FN684-S Chr5 6515521 6515525 0 0 Deletion 4 LOC_Os05g11510 B-box zinc finger family protein, putative, expressed FN684-S Chr5 9396070 G-T 0 0 Single Base Substitution 0 INTRON HET FN684-S Chr6 5893640 T-C 0 0 Single Base Substitution 0 INTRON HET FN684-S Chr6 8704199 8704199 0 0 Insertion 2 FN684-S Chr7 10114786 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN684-S Chr7 10114787 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN684-S Chr7 10214767 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN684-S Chr7 22132763 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g36970 transposon protein, putative, unclassified, expressed FN684-S Chr7 23770635 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN684-S Chr7 25709391 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN684-S Chr8 19985564 Chr1 17675367 0 Translocation 0 LOC_Os08g32260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN684-S Chr8 24618450 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN684-S Chr8 3249090 3249091 0 0 Deletion 1 FN684-S Chr8 806254 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN684-S Chr8 8827001 8913000 0 0 Deletion 86000 LOC_Os08g14670 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN684-S Chr8 8827001 8913000 0 0 Deletion 86000 LOC_Os08g14690 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN684-S Chr8 8827001 8913000 0 0 Deletion 86000 LOC_Os08g14700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed FN684-S Chr8 8827001 8913000 0 0 Deletion 86000 LOC_Os08g14710 expressed protein FN684-S Chr8 8827001 8913000 0 0 Deletion 86000 LOC_Os08g14720 expressed protein FN684-S Chr8 8827001 8913000 0 0 Deletion 86000 LOC_Os08g14730 retrotransposon, putative, centromere-specific FN684-S Chr8 8827001 8913000 0 0 Deletion 86000 LOC_Os08g14744 retrotransposon protein, putative, unclassified FN684-S Chr8 8827001 8913000 0 0 Deletion 86000 LOC_Os08g14760 AMP-binding domain containing protein, expressed FN684-S Chr8 8827001 8913000 0 0 Deletion 86000 LOC_Os08g14770 aminotransferase, putative, expressed FN684-S Chr8 8827001 8913000 0 0 Deletion 86000 LOC_Os08g14780 expressed protein FN684-S Chr8 8827001 8913000 0 0 Deletion 86000 LOC_Os08g14790 expressed protein FN684-S Chr8 8827001 8913000 0 0 Deletion 86000 LOC_Os08g14800 disease resistance protein RPM1, putative, expressed FN684-S Chr8 8827001 8913000 0 0 Deletion 86000 LOC_Os08g14810 NB-ARC domain containing protein, expressed FN684-S Chr8 9733423 9733424 0 0 Deletion 1 FN684-S Chr9 12265310 G-C 0 0 Single Base Substitution 0 INTRON HET FN684-S Chr9 1471375 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN684-S Chr9 15328554 15328557 0 0 Deletion 3 FN684-S Chr9 20089001 20108000 0 0 Deletion 19000 LOC_Os09g34040 TBC domain containing protein, expressed FN684-S Chr9 20089001 20108000 0 0 Deletion 19000 LOC_Os09g34050 expressed protein FN684-S Chr9 20089001 20108000 0 0 Deletion 19000 LOC_Os09g34060 transcription factor RF2a, putative, expressed FN684-S Chr9 20089001 20108000 0 0 Deletion 19000 LOC_Os09g34070 RNA recognition motif containing protein, expressed FN684-S Chr9 2241264 G-T 0 0 Single Base Substitution 0 INTRON HET FN684-S Chr9 2379634 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN684-S Chr9 2379635 C-T 0 0 Single Base Substitution 0 INTERGENIC HET