FN722-S Chr1 13552365 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN722-S Chr1 18959454 18959462 0 0 Deletion 8 FN722-S Chr1 28152347 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN722-S Chr1 35121130 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN722-S Chr1 7822042 7822042 0 0 Insertion 2 FN722-S Chr10 12093467 12093469 0 0 Deletion 2 FN722-S Chr10 15348640 T-A 0 0 Single Base Substitution 0 INTRON HET FN722-S Chr10 15348641 C-T 0 0 Single Base Substitution 0 INTRON HET FN722-S Chr10 3739753 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN722-S Chr10 8605251 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN722-S Chr10 9469208 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN722-S Chr11 19576681 19576681 0 0 Insertion 3 FN722-S Chr11 27227127 27227128 0 0 Deletion 1 FN722-S Chr11 27773717 Chr6 8926387 0 Translocation 0 LOC_Os06g15740 expressed protein FN722-S Chr11 8451532 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN722-S Chr12 15062485 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN722-S Chr12 15276021 G-C 0 0 Single Base Substitution 0 INTRON HET FN722-S Chr12 21028253 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN722-S Chr12 25123812 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN722-S Chr12 27448285 27448300 0 0 Deletion 15 FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01760 F-box/LRR domain containing protein, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01770 protein phosphatase 2c, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01780 retrotransposon protein, putative, Ty1-copia subclass, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01790 retrotransposon protein, putative, unclassified, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01800 DNA cytosine methyltransferase Zmet3, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01810 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01820 ATCHX, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01830 staphylococcal nuclease homologue, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01850 pentatricopeptide, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01860 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01870 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01880 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01890 SAG20, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01900 retrotransposon protein, putative, unclassified, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01910 pentatricopeptide, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01916 double-stranded RNA binding motif containing protein, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01922 WD domain and HEAT domain containing protein, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01930 lipase-related, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01940 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01950 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01955 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01960 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01970 F-box family protein, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01980 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g01990 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02000 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02010 retrotransposon protein, putative, unclassified, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02020 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02030 BTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02040 hypoxia-responsive family protein, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02050 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02060 peroxidase precursor, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02070 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02080 peroxidase precursor, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02090 TCP family transcription factor, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02094 saposin-like type B, region 1 family protein, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02100 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02105 LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02120 dual specificity protein phosphatase, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02130 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02140 hypothetical protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02150 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02160 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02170 retrotransposon protein, putative, SINE subclass, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02180 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02200 CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02210 RING finger protein, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02220 zinc finger, C3HC4 type domain containing protein, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02230 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02240 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02250 STE_PAK_Ste20_Slob_Wnk.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02260 nucleotidyltransferase, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02270 transposon protein, putative, unclassified, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02280 pentatricopeptide, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02290 LTPL23 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02300 LTPL26 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02310 LTPL11 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02320 LTPL12 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02330 LTPL13 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02340 LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02350 RING-H2 finger protein, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02370 chalcone--flavonone isomerase, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02380 elongation factor P, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02385 outer membrane protein, OMP85 family, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02390 vacuolar-sorting receptor precursor, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02400 WRKY114, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02410 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02420 WRKY97, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02430 MYB protein, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02440 WRKY95, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02450 WRKY64, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02460 transposon protein, putative, unclassified, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02470 WRKY65, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02490 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02500 esterase, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02510 esterase, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02520 OsMan09 - Endo-Beta-Mannanase, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02530 BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02540 BTBN23 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02550 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02560 hypothetical protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02570 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02589 hydrolase, alpha/beta fold family protein, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02610 retrotransposon protein, putative, unclassified, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02620 zinc finger, C3HC4 type domain containing protein, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02630 cytochrome P450 72A1, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02640 cytochrome P450 72A1, putative, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02660 expressed protein FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02670 retrotransposon protein, putative, Ty1-copia subclass, expressed FN722-S Chr12 465001 938000 0 0 Deletion 473000 LOC_Os12g02680 expressed protein FN722-S Chr12 5010647 5010667 0 0 Deletion 20 FN722-S Chr12 9725494 Chr9 13612938 0 Translocation 0 FN722-S Chr2 15497000 15497015 0 0 Deletion 15 LOC_Os02g26390 expressed protein FN722-S Chr2 20556227 20556234 0 0 Deletion 7 FN722-S Chr2 29779336 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN722-S Chr2 4865190 4865199 0 0 Deletion 9 FN722-S Chr3 16851999 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN722-S Chr3 20136911 C-T 0 0 Single Base Substitution 0 INTRON HET FN722-S Chr3 24695999 24695999 0 0 Insertion 1 FN722-S Chr3 9165141 9165142 0 0 Deletion 1 FN722-S Chr4 15070039 Chr2 15004703 0 Translocation 0 FN722-S Chr4 20224267 20224268 0 0 Deletion 1 FN722-S Chr5 11644980 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN722-S Chr5 11644981 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN722-S Chr5 16541975 16541976 0 0 Deletion 1 LOC_Os05g28250 retrotransposon, putative, centromere-specific FN722-S Chr5 1805318 1805320 0 0 Deletion 2 FN722-S Chr5 3231761 C-G 0 0 Single Base Substitution 0 INTRON HOMO FN722-S Chr6 1453600 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN722-S Chr6 14825406 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN722-S Chr6 15308001 15382000 0 0 Deletion 74000 LOC_Os06g26170 expressed protein FN722-S Chr6 15308001 15382000 0 0 Deletion 74000 LOC_Os06g26180 expressed protein FN722-S Chr6 15308001 15382000 0 0 Deletion 74000 LOC_Os06g26190 retrotransposon, putative, centromere-specific FN722-S Chr6 15308001 15382000 0 0 Deletion 74000 LOC_Os06g26210 retrotransposon protein, putative, unclassified, expressed FN722-S Chr6 15308001 15382000 0 0 Deletion 74000 LOC_Os06g26234 1,4-alpha-glucan-branching enzyme, putative, expressed FN722-S Chr6 15308001 15382000 0 0 Deletion 74000 LOC_Os06g26260 retrotransposon protein, putative, unclassified, expressed FN722-S Chr6 15308001 15382000 0 0 Deletion 74000 LOC_Os06g26270 prefoldin, putative, expressed FN722-S Chr6 15382347 Chr1 32942414 0 Translocation 0 LOC_Os01g57020 expressed protein FN722-S Chr6 15382347 Chr1 32942414 0 Translocation 0 LOC_Os06g26270 prefoldin, putative, expressed FN722-S Chr6 15382466 Chr1 32942160 0 Translocation 0 LOC_Os01g57020 expressed protein FN722-S Chr6 15382466 Chr1 32942160 0 Translocation 0 LOC_Os06g26270 prefoldin, putative, expressed FN722-S Chr6 2038793 2038803 0 0 Deletion 10 FN722-S Chr6 20948219 20948219 0 0 Insertion 1 FN722-S Chr6 25701969 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN722-S Chr6 25701977 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g42730 OsPOP14 - Putative Prolyl Oligopeptidase homologue, expressed FN722-S Chr6 27696430 27696433 0 0 Deletion 3 LOC_Os06g45760 retrotransposon protein, putative, unclassified, expressed FN722-S Chr6 2969316 2969322 0 0 Deletion 6 FN722-S Chr6 8299499 8299500 0 0 Deletion 1 LOC_Os06g14730 transposon protein, putative, unclassified, expressed FN722-S Chr7 226868 Chr2 21806144 0 Translocation 0 FN722-S Chr7 2358535 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g05220 hypothetical protein FN722-S Chr7 5017148 5017149 0 0 Deletion 1 FN722-S Chr7 5718351 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN722-S Chr7 6194110 6194124 0 0 Deletion 14 LOC_Os07g11240 retrotransposon protein, putative, unclassified, expressed FN722-S Chr7 6716371 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN722-S Chr7 6716611 6882638 0 0 Inversion 166027 LOC_Os07g12255 expressed protein FN722-S Chr8 12894810 Chr6 23394152 0 Translocation 0 FN722-S Chr8 18487653 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN722-S Chr8 22043197 C-T 0 0 Single Base Substitution 0 INTRON HET FN722-S Chr8 24714310 A-T 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os08g39120 expressed protein FN722-S Chr9 12854597 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN722-S Chr9 13604391 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN722-S Chr9 14377162 Chr2 32007609 0 Translocation 0 FN722-S Chr9 2041086 2041096 0 0 Deletion 10 LOC_Os09g03970 conserved hypothetical protein FN722-S Chr9 3265524 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN722-S Chr9 6670068 6670089 0 0 Deletion 21