FN729-S Chr1 10227563 10227563 0 0 Insertion 2 FN729-S Chr1 13624563 C-A 0 0 Single Base Substitution 0 INTRON HET FN729-S Chr1 16874008 G-A 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os01g30936 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN729-S Chr1 30960622 30960632 0 0 Deletion 10 FN729-S Chr1 7278628 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN729-S Chr10 12182186 12182220 0 0 Deletion 34 LOC_Os10g23310 transferase family protein, putative, expressed FN729-S Chr10 6268495 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN729-S Chr11 15902768 15920244 0 0 Deletion 17476 LOC_Os11g27620 dirigent, putative, expressed FN729-S Chr11 15902768 15920244 0 0 Deletion 17476 LOC_Os11g27630 expressed protein FN729-S Chr11 15902768 15920244 0 0 Deletion 17476 LOC_Os11g27640 expressed protein FN729-S Chr11 15902768 15920244 0 0 Deletion 17476 LOC_Os11g27650 retrotransposon protein, putative, Ty1-copia subclass, expressed FN729-S Chr11 16843137 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN729-S Chr11 24016098 24016098 0 0 Insertion 2 FN729-S Chr11 24365217 24365217 0 0 Insertion 2 FN729-S Chr11 24654014 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN729-S Chr11 9223520 10151531 0 0 Inversion 928011 LOC_Os11g16630 expressed protein FN729-S Chr11 9223546 10151547 0 0 Inversion 928001 LOC_Os11g16630 expressed protein FN729-S Chr12 10482831 Chr4 3613588 0 Translocation 0 LOC_Os04g06850 expressed protein FN729-S Chr12 17957470 T-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN729-S Chr12 1804358 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g04260 astaxanthin synthase KC28, putative, expressed FN729-S Chr12 25839269 26043327 0 0 Inversion 204058 LOC_Os12g41720 PLA IIIA/PLP7, putative, expressed FN729-S Chr12 8797140 8797142 0 0 Deletion 2 LOC_Os12g15400 CXE carboxylesterase, putative, expressed FN729-S Chr2 11717785 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN729-S Chr2 14807721 C-A 0 0 Single Base Substitution 0 INTRON HET FN729-S Chr2 19812586 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN729-S Chr2 21978201 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN729-S Chr2 3204640 3204654 0 0 Deletion 14 LOC_Os02g06410 CBS domain containing membrane protein, putative, expressed FN729-S Chr3 12315514 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN729-S Chr3 12800054 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN729-S Chr3 24292049 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN729-S Chr3 29650229 Chr1 22620359 0 Translocation 0 LOC_Os01g40094 protein phosphatase 2C, putative, expressed FN729-S Chr3 29650229 Chr1 22620359 0 Translocation 0 LOC_Os03g51730 retrotransposon protein, putative, Ty1-copia subclass, expressed FN729-S Chr3 36158302 36158303 0 0 Deletion 1 FN729-S Chr3 6425598 6425618 0 0 Deletion 20 LOC_Os03g12236 heat shock protein DnaJ, putative, expressed FN729-S Chr4 33121279 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN729-S Chr4 33471581 33471582 0 0 Deletion 1 FN729-S Chr4 33645500 33645500 0 0 Insertion 1 FN729-S Chr4 3862490 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN729-S Chr4 4209517 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN729-S Chr4 475493 475494 0 0 Deletion 1 FN729-S Chr5 10037591 10037592 0 0 Deletion 1 LOC_Os05g17470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN729-S Chr5 10509568 10509572 0 0 Deletion 4 FN729-S Chr5 12140692 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os05g20710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN729-S Chr5 19778205 19778206 0 0 Deletion 1 LOC_Os05g33620 expressed protein FN729-S Chr5 20210012 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN729-S Chr5 21298110 21298125 0 0 Deletion 15 FN729-S Chr5 26333603 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN729-S Chr5 849990 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN729-S Chr6 13868397 13868398 0 0 Deletion 1 LOC_Os06g23730 retrotransposon, putative, centromere-specific FN729-S Chr6 632079 636703 0 0 Deletion 4624 LOC_Os06g02120 PPR repeat domain containing protein, putative, expressed FN729-S Chr6 632079 636703 0 0 Deletion 4624 LOC_Os06g02130 G-protein alpha subunit, putative, expressed FN729-S Chr6 8615563 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN729-S Chr6 9321662 9321680 0 0 Deletion 18 FN729-S Chr7 11746506 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g20360 retrotransposon protein, putative, unclassified, expressed FN729-S Chr8 1522943 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN729-S Chr8 5455164 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN729-S Chr8 7049914 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN729-S Chr9 13582117 Chr3 10613252 0 Translocation 0 FN729-S Chr9 16133249 16133256 0 0 Deletion 7 FN729-S Chr9 19846149 Chr1 3185233 0 Translocation 0 LOC_Os01g06730 verticillium wilt disease resistance protein, putative, expressed FN729-S Chr9 19846149 Chr1 3185233 0 Translocation 0 LOC_Os09g33610 retrotransposon protein, putative, unclassified, expressed