FN742-S Chr1 10404725 A-G 0 0 Single Base Substitution 0 INTRON HET FN742-S Chr1 18797630 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr1 22516214 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g39930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN742-S Chr1 25581159 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g45060 polygalacturonase, putative, expressed FN742-S Chr1 40741357 40741360 0 0 Deletion 3 FN742-S Chr1 42911892 42911895 0 0 Deletion 3 FN742-S Chr1 6679067 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr10 15151414 Chr5 26317333 0 Translocation 0 LOC_Os10g29090 retrotransposon protein, putative, unclassified, expressed FN742-S Chr10 17966063 17966075 0 0 Deletion 12 LOC_Os10g33850 Exo70 exocyst complex subunit family, putative, expressed FN742-S Chr10 18921378 19485347 0 0 Inversion 563969 FN742-S Chr10 6309330 C-T 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HOMO FN742-S Chr10 8413182 8413187 0 0 Deletion 5 LOC_Os10g16880 retrotransposon protein, putative, unclassified, expressed FN742-S Chr11 10486420 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr11 11179822 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN742-S Chr11 12582328 12582332 0 0 Deletion 4 FN742-S Chr11 13451842 C-A 0 0 Single Base Substitution 0 INTRON HET FN742-S Chr11 14429968 14429971 0 0 Deletion 3 FN742-S Chr11 15413831 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr11 18310426 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr11 23208034 23208034 0 0 Insertion 3 FN742-S Chr12 17331898 17331971 0 0 Deletion 73 FN742-S Chr12 2219329 2449993 0 0 Inversion 230664 LOC_Os12g05050 stem-specific protein TSJT1, putative, expressed FN742-S Chr12 2219329 2449993 0 0 Inversion 230664 LOC_Os12g05410 G10 protein, putative, expressed FN742-S Chr12 2223965 2450012 0 0 Inversion 226047 LOC_Os12g05410 G10 protein, putative, expressed FN742-S Chr2 21142359 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr2 25070043 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr2 25923001 25972000 0 0 Deletion 49000 LOC_Os02g43050 kinesin motor domain containing protein, expressed FN742-S Chr2 25923001 25972000 0 0 Deletion 49000 LOC_Os02g43060 retrotransposon protein, putative, Ty1-copia subclass FN742-S Chr2 25923001 25972000 0 0 Deletion 49000 LOC_Os02g43070 retrotransposon protein, putative, unclassified, expressed FN742-S Chr2 25923001 25972000 0 0 Deletion 49000 LOC_Os02g43080 PPR repeat domain containing protein, putative, expressed FN742-S Chr2 25923001 25972000 0 0 Deletion 49000 LOC_Os02g43090 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed FN742-S Chr2 25923001 25972000 0 0 Deletion 49000 LOC_Os02g43100 expressed protein FN742-S Chr2 25923001 25972000 0 0 Deletion 49000 LOC_Os02g43110 sodium/calcium exchanger 1 precursor, putative, expressed FN742-S Chr2 25923001 25972000 0 0 Deletion 49000 LOC_Os02g43120 zinc finger, C3HC4 type domain containing protein, expressed FN742-S Chr2 26392004 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr2 27903695 27903698 0 0 Deletion 3 FN742-S Chr2 32356005 T-A 0 0 Single Base Substitution 0 INTRON HET FN742-S Chr2 32356006 C-T 0 0 Single Base Substitution 0 INTRON HET FN742-S Chr2 32456255 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr2 32730001 32806000 0 0 Deletion 76000 LOC_Os02g53520 kinesin motor domain containing protein, putative, expressed FN742-S Chr2 32730001 32806000 0 0 Deletion 76000 LOC_Os02g53530 ZOS2-17 - C2H2 zinc finger protein, expressed FN742-S Chr2 32730001 32806000 0 0 Deletion 76000 LOC_Os02g53540 retrotransposon protein, putative, unclassified, expressed FN742-S Chr2 32730001 32806000 0 0 Deletion 76000 LOC_Os02g53550 retrotransposon protein, putative, unclassified, expressed FN742-S Chr2 32730001 32806000 0 0 Deletion 76000 LOC_Os02g53570 DEFL74 - Defensin and Defensin-like DEFL family, expressed FN742-S Chr2 32730001 32806000 0 0 Deletion 76000 LOC_Os02g53580 expressed protein FN742-S Chr2 32730001 32806000 0 0 Deletion 76000 LOC_Os02g53590 DEFL71 - Defensin and Defensin-like DEFL family, expressed FN742-S Chr2 32730001 32806000 0 0 Deletion 76000 LOC_Os02g53600 DEFL75 - Defensin and Defensin-like DEFL family, expressed FN742-S Chr2 32730001 32806000 0 0 Deletion 76000 LOC_Os02g53610 retrotransposon protein, putative, Ty1-copia subclass, expressed FN742-S Chr2 32730001 32806000 0 0 Deletion 76000 LOC_Os02g53620 nuclear transcription factor Y subunit, putative, expressed FN742-S Chr2 32730001 32806000 0 0 Deletion 76000 LOC_Os02g53630 retrotransposon protein, putative, unclassified, expressed FN742-S Chr2 34696279 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr2 4305744 Chr1 10716869 0 Translocation 0 LOC_Os02g08130 FGGY family of carbohydrate kinases, putative, expressed FN742-S Chr2 7507724 7507725 0 0 Deletion 1 LOC_Os02g13850 leucine-rich repeat-containing protein kinase family protein, putative, expressed FN742-S Chr2 9816989 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os02g17140 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN742-S Chr2 9925716 9925721 0 0 Deletion 5 FN742-S Chr3 21356167 21356170 0 0 Deletion 3 FN742-S Chr3 32309854 32309855 0 0 Deletion 1 FN742-S Chr3 4066363 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os03g07950 expressed protein FN742-S Chr3 5900487 5900496 0 0 Deletion 9 LOC_Os03g11450 expressed protein FN742-S Chr3 7062212 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g13050 E2F-related protein, putative, expressed FN742-S Chr4 12920825 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr4 1373508 1373509 0 0 Deletion 1 FN742-S Chr4 21256962 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr4 2998393 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr4 4478005 20345712 0 0 Inversion 15867707 FN742-S Chr4 4976275 4976299 0 0 Deletion 24 LOC_Os04g09360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN742-S Chr4 7015641 G-T 0 0 Single Base Substitution 0 INTRON HET FN742-S Chr4 7252893 7252897 0 0 Deletion 4 FN742-S Chr5 20270791 20270791 0 0 Insertion 1 FN742-S Chr5 22285936 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr5 22658402 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr5 24988050 24988549 0 0 Deletion 499 LOC_Os05g43030 expressed protein FN742-S Chr5 24988168 Chr2 4305748 0 Translocation 0 LOC_Os02g08130 FGGY family of carbohydrate kinases, putative, expressed FN742-S Chr5 24988168 Chr2 4305748 0 Translocation 0 LOC_Os05g43030 expressed protein FN742-S Chr5 24988541 Chr1 10717420 0 Translocation 0 LOC_Os05g43030 expressed protein FN742-S Chr5 3081148 3081149 0 0 Deletion 1 FN742-S Chr6 24643930 24643948 0 0 Deletion 18 FN742-S Chr6 24647352 24647353 0 0 Deletion 1 FN742-S Chr6 24898795 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr6 25499839 25499842 0 0 Deletion 3 FN742-S Chr6 25569311 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr6 2814585 2814587 0 0 Deletion 2 FN742-S Chr7 16545722 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os07g28340 transposon protein, putative, unclassified, expressed FN742-S Chr7 18072989 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN742-S Chr7 18226425 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN742-S Chr7 4124573 4124573 0 0 Insertion 2 FN742-S Chr7 5988991 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN742-S Chr8 11454693 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr8 17486232 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr8 26848524 26848532 0 0 Deletion 8 FN742-S Chr8 4943306 G-A 0 0 Single Base Substitution 0 INTRON HET FN742-S Chr8 6880636 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g11730 retrotransposon protein, putative, unclassified FN742-S Chr8 7581533 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN742-S Chr9 10407045 10407045 0 0 Insertion 2 FN742-S Chr9 14992237 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN742-S Chr9 4673546 4673548 0 0 Deletion 2