FN764-S Chr1 13622575 13622581 0 0 Deletion 6 FN764-S Chr1 2329880 2329880 0 0 Insertion 2 FN764-S Chr1 23498957 C-A 0 0 Single Base Substitution 0 INTRON HET FN764-S Chr1 40178547 40178562 0 0 Deletion 15 LOC_Os01g69120 uncharacterized RNA methyltransferase pc1998, putative, expressed FN764-S Chr1 5726034 5726034 0 0 Insertion 2 FN764-S Chr1 5861971 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g10990 integral membrane protein DUF6 containing protein, expressed FN764-S Chr1 5904841 C-A 0 0 Single Base Substitution 0 INTRON HET FN764-S Chr1 7244354 7244355 0 0 Deletion 1 FN764-S Chr10 15033310 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN764-S Chr10 17451797 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g33250 WAX2, putative, expressed FN764-S Chr10 18094826 18094827 0 0 Deletion 1 FN764-S Chr10 22652636 22652637 0 0 Deletion 1 LOC_Os10g42110 protein kinase family protein, putative, expressed FN764-S Chr10 22697606 Chr6 4198232 0 Translocation 0 FN764-S Chr10 22699236 Chr6 14677084 0 Translocation 0 LOC_Os10g42196 expressed protein FN764-S Chr10 22844975 22845003 0 0 Deletion 28 FN764-S Chr10 8698506 8698510 0 0 Deletion 4 FN764-S Chr10 9316889 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN764-S Chr11 11448769 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN764-S Chr11 2184012 2184013 0 0 Deletion 1 FN764-S Chr11 22938450 22938465 0 0 Deletion 15 FN764-S Chr11 6277561 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN764-S Chr12 25114001 25169000 0 0 Deletion 55000 LOC_Os12g40580 retrotransposon protein, putative, unclassified FN764-S Chr12 25114001 25169000 0 0 Deletion 55000 LOC_Os12g40590 helix-loop-helix DNA-binding domain containing protein, expressed FN764-S Chr12 25114001 25169000 0 0 Deletion 55000 LOC_Os12g40600 transposon protein, putative, CACTA, En/Spm sub-class FN764-S Chr12 25114001 25169000 0 0 Deletion 55000 LOC_Os12g40610 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN764-S Chr12 25114001 25169000 0 0 Deletion 55000 LOC_Os12g40619 expressed protein FN764-S Chr12 25114001 25169000 0 0 Deletion 55000 LOC_Os12g40630 helix-loop-helix DNA-binding domain containing protein, expressed FN764-S Chr12 25172760 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN764-S Chr12 25538981 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN764-S Chr2 25212280 25212358 0 0 Deletion 78 FN764-S Chr2 25540917 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN764-S Chr2 6882041 6882059 0 0 Deletion 18 LOC_Os02g12980 retrotransposon protein, putative, unclassified, expressed FN764-S Chr2 7004524 7004544 0 0 Deletion 20 FN764-S Chr3 16146175 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN764-S Chr3 21201462 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN764-S Chr3 28984926 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN764-S Chr3 35917472 35917484 0 0 Deletion 12 FN764-S Chr4 12634430 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g22320 hypothetical protein FN764-S Chr4 12634734 12634741 0 0 Deletion 7 FN764-S Chr4 13593744 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN764-S Chr4 14547660 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN764-S Chr4 28580209 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN764-S Chr4 34773312 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g58450 retrotransposon protein, putative, unclassified, expressed FN764-S Chr4 6695116 6695123 0 0 Deletion 7 FN764-S Chr5 20364542 20364562 0 0 Deletion 20 FN764-S Chr5 3579783 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN764-S Chr5 4722171 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN764-S Chr5 5495001 5555000 0 0 Deletion 60000 LOC_Os05g09716 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN764-S Chr5 5495001 5555000 0 0 Deletion 60000 LOC_Os05g09720 expressed protein FN764-S Chr5 5495001 5555000 0 0 Deletion 60000 LOC_Os05g09724 HAD superfamily phosphatase, putative, expressed FN764-S Chr5 5495001 5555000 0 0 Deletion 60000 LOC_Os05g09728 expressed protein FN764-S Chr5 5495001 5555000 0 0 Deletion 60000 LOC_Os05g09732 acid phosphatase family, putative, expressed FN764-S Chr5 5495001 5555000 0 0 Deletion 60000 LOC_Os05g09736 retrotransposon protein, putative, Ty1-copia subclass, expressed FN764-S Chr5 5495001 5555000 0 0 Deletion 60000 LOC_Os05g09740 HAD superfamily phosphatase, putative, expressed FN764-S Chr5 5495001 5555000 0 0 Deletion 60000 LOC_Os05g10210 HAD superfamily phosphatase, putative, expressed FN764-S Chr5 7165376 A-T 0 0 Single Base Substitution 0 INTRON HET FN764-S Chr6 12082660 12082662 0 0 Deletion 2 LOC_Os06g20920 SAM dependent carboxyl methyltransferase, putative, expressed FN764-S Chr6 13665621 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN764-S Chr6 14723302 14723317 0 0 Deletion 15 FN764-S Chr6 4158956 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN764-S Chr7 10092053 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g17160 expressed protein FN764-S Chr7 10093001 10140000 0 0 Deletion 47000 LOC_Os07g17160 expressed protein FN764-S Chr7 10093001 10140000 0 0 Deletion 47000 LOC_Os07g17170 expressed protein FN764-S Chr7 10093001 10140000 0 0 Deletion 47000 LOC_Os07g17180 no apical meristem protein, expressed FN764-S Chr7 10093001 10140000 0 0 Deletion 47000 LOC_Os07g17184 expressed protein FN764-S Chr7 10093001 10140000 0 0 Deletion 47000 LOC_Os07g17200 retrotransposon, putative, centromere-specific FN764-S Chr7 10093001 10140000 0 0 Deletion 47000 LOC_Os07g17210 FAS1, putative, expressed FN764-S Chr7 10790798 10926322 0 0 Inversion 135524 LOC_Os07g18200 retrotransposon protein, putative, unclassified, expressed FN764-S Chr7 10920496 10926327 0 0 Inversion 5831 FN764-S Chr7 13013367 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g23070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN764-S Chr7 153340 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN764-S Chr7 16179008 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g27730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN764-S Chr7 25410263 25410266 0 0 Deletion 3 LOC_Os07g42440 hydroxyacid oxidase 1, putative, expressed FN764-S Chr7 8597714 10093460 0 0 Inversion 1495746 LOC_Os07g14990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN764-S Chr8 1532791 2152604 0 0 Inversion 619813 LOC_Os08g03300 OsFBDUF40 - F-box and DUF domain containing protein, expressed FN764-S Chr8 1532808 Chr1 2975375 0 Translocation 0 LOC_Os01g06270 expressed protein FN764-S Chr8 1532808 Chr1 2975375 0 Translocation 0 LOC_Os08g03300 OsFBDUF40 - F-box and DUF domain containing protein, expressed FN764-S Chr8 2039401 Chr1 2975388 0 Translocation 0 LOC_Os01g06270 expressed protein FN764-S Chr8 22613818 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN764-S Chr8 23577137 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN764-S Chr8 542779 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN764-S Chr8 7642844 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN764-S Chr8 8352011 8975028 0 0 Inversion 623017 FN764-S Chr8 8352033 8975021 0 0 Inversion 622988 FN764-S Chr9 14090251 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN764-S Chr9 21553825 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g37310 retrotransposon protein, putative, unclassified, expressed FN764-S Chr9 3852373 3852385 0 0 Deletion 12 FN764-S Chr9 6179294 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN764-S Chr9 9717118 C-T 0 0 Single Base Substitution 0 INTERGENIC HET