FN769-S Chr1 10808907 10808908 0 0 Deletion 1 FN769-S Chr1 14480258 14480267 0 0 Deletion 9 FN769-S Chr1 15176174 15176183 0 0 Deletion 9 FN769-S Chr1 22473862 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN769-S Chr1 2711685 2711687 0 0 Deletion 2 FN769-S Chr1 32042630 32042631 0 0 Deletion 1 FN769-S Chr1 38322409 38322415 0 0 Deletion 6 FN769-S Chr1 39194785 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr1 42478357 42478516 0 0 Deletion 159 FN769-S Chr1 42767777 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN769-S Chr1 9707213 G-T 0 0 Single Base Substitution 0 INTRON HET FN769-S Chr10 1030941 Chr4 16124871 0 Translocation 0 FN769-S Chr10 1031958 1370352 0 0 Inversion 338394 LOC_Os10g03240 retrotransposon protein, putative, Ty3-gypsy subclass FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24470 retrotransposon, putative, centromere-specific, expressed FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24480 retrotransposon, putative, centromere-specific, expressed FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24490 retrotransposon protein, putative, unclassified FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24500 expressed protein FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24520 retrotransposon protein, putative, Ty3-gypsy subclass FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24530 retrotransposon protein, putative, Ty3-gypsy subclass FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24590 retrotransposon protein, putative, Ty3-gypsy subclass FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24610 transposon protein, putative, unclassified FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24630 transposon protein, putative, unclassified FN769-S Chr10 12545001 12663000 0 0 Deletion 118000 LOC_Os10g24640 retrotransposon protein, putative, unclassified, expressed FN769-S Chr10 12924228 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN769-S Chr10 9765241 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN769-S Chr11 12724547 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr11 14224097 14224104 0 0 Deletion 7 LOC_Os11g24980 hypothetical protein FN769-S Chr11 22608758 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr11 2350784 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr11 6251849 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g11290 retrotransposon protein, putative, unclassified, expressed FN769-S Chr12 18804445 18804447 0 0 Deletion 2 FN769-S Chr12 21887347 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr12 377180 T-C 0 0 Single Base Substitution 0 INTRON HET FN769-S Chr12 4229748 4229749 0 0 Deletion 1 FN769-S Chr2 13610472 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr2 14181964 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr2 16468454 16468454 0 0 Insertion 4 LOC_Os02g27810 MazG nucleotide pyrophosphohydrolase domain containing protein, expressed FN769-S Chr2 17208586 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr2 17841456 17841458 0 0 Deletion 2 LOC_Os02g30030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN769-S Chr2 18588040 18588040 0 0 Insertion 11 FN769-S Chr2 19427799 19427799 0 0 Insertion 6 FN769-S Chr2 19820358 19820366 0 0 Deletion 8 FN769-S Chr2 28355196 28356197 0 0 Deletion 1001 LOC_Os02g46510 adaptor complexes medium subunit family domain containing protein, expressed FN769-S Chr2 29497971 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr2 30741076 30741077 0 0 Deletion 1 FN769-S Chr2 33185688 33187437 0 0 Deletion 1749 FN769-S Chr3 15080411 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g26380 transposon protein, putative, unclassified, expressed FN769-S Chr3 19097989 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g33400 expressed protein FN769-S Chr3 21067983 21067999 0 0 Deletion 16 FN769-S Chr3 22003256 22003268 0 0 Deletion 12 FN769-S Chr3 23613828 23613843 0 0 Deletion 15 FN769-S Chr4 12533306 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr4 15258737 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g26160 hypothetical protein FN769-S Chr4 25055851 25055851 0 0 Insertion 1 FN769-S Chr4 6528438 6528459 0 0 Deletion 21 FN769-S Chr5 12074056 12074060 0 0 Deletion 4 FN769-S Chr5 14500998 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g25060 PPR repeat domain containing protein, putative, expressed FN769-S Chr5 15366083 C-T 0 0 Single Base Substitution 0 INTRON HET FN769-S Chr5 19262218 T-G 0 0 Single Base Substitution 0 INTRON HET FN769-S Chr5 21200975 21200975 0 0 Insertion 2 FN769-S Chr5 22977252 Chr2 28355198 0 Translocation 0 LOC_Os05g39180 expressed protein FN769-S Chr5 23795454 23795456 0 0 Deletion 2 FN769-S Chr5 23799208 C-T 0 0 Single Base Substitution 0 INTRON HET FN769-S Chr5 27977435 27977437 0 0 Deletion 2 FN769-S Chr6 3574791 3574793 0 0 Deletion 2 FN769-S Chr6 5732846 5732850 0 0 Deletion 4 LOC_Os06g10970 xyloglucan fucosyltransferase, putative, expressed FN769-S Chr7 11617090 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr7 16456453 16456453 0 0 Insertion 1 FN769-S Chr7 173274 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr7 24399436 C-T 0 0 Single Base Substitution 0 INTRON HET FN769-S Chr7 28354245 28354245 0 0 Insertion 2 FN769-S Chr7 8638678 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr7 9201009 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr8 2576489 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr8 27156353 27156371 0 0 Deletion 18 FN769-S Chr8 27663722 27663784 0 0 Deletion 62 FN769-S Chr9 11977751 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN769-S Chr9 13212553 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr9 1606559 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN769-S Chr9 2879465 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g06150 retrotransposon protein, putative, unclassified, expressed FN769-S Chr9 7472473 7472548 0 0 Deletion 75