FN778-S Chr1 12165144 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN778-S Chr1 23118999 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g40870 aldehyde dehydrogenase, putative, expressed FN778-S Chr1 25252911 25252911 0 0 Insertion 1 FN778-S Chr1 2649533 2649581 0 0 Deletion 48 FN778-S Chr1 27519110 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN778-S Chr1 28433219 28433220 0 0 Deletion 1 LOC_Os01g49440 expressed protein FN778-S Chr10 10510231 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN778-S Chr10 12407415 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN778-S Chr10 5875812 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN778-S Chr11 11179822 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN778-S Chr11 18616749 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN778-S Chr11 20263978 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN778-S Chr11 23858455 G-C 0 0 Single Base Substitution 0 INTRON HET FN778-S Chr11 26328377 26328379 0 0 Deletion 2 FN778-S Chr11 5679205 5679211 0 0 Deletion 6 FN778-S Chr12 10998902 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN778-S Chr12 22628590 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN778-S Chr12 23473973 23473976 0 0 Deletion 3 FN778-S Chr12 23551114 23551114 0 0 Insertion 2 FN778-S Chr12 24953500 24953501 0 0 Deletion 1 FN778-S Chr2 10756423 10756427 0 0 Deletion 4 FN778-S Chr2 16686961 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN778-S Chr2 2106300 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN778-S Chr2 26392004 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN778-S Chr2 29011645 29011655 0 0 Deletion 10 FN778-S Chr2 29864978 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g48790 AML1, putative, expressed FN778-S Chr2 29866565 29866573 0 0 Deletion 8 LOC_Os02g48790 AML1, putative, expressed FN778-S Chr2 30520234 30520238 0 0 Deletion 4 FN778-S Chr2 3165873 Chr1 24455555 0 Translocation 0 FN778-S Chr2 3165879 Chr1 24386184 0 Translocation 0 LOC_Os01g42850 ThiF family domain containing protein, putative, expressed FN778-S Chr3 30129181 30129383 0 0 Deletion 202 FN778-S Chr3 31077730 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN778-S Chr3 31077731 G-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN778-S Chr3 31077732 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN778-S Chr3 32254326 32261250 0 0 Deletion 6924 LOC_Os03g56630 transposon protein, putative, unclassified, expressed FN778-S Chr3 32254326 32261250 0 0 Deletion 6924 LOC_Os03g56640 transposon protein, putative, unclassified, expressed FN778-S Chr3 556953 556956 0 0 Deletion 3 FN778-S Chr4 12273504 14133482 0 0 Inversion 1859978 LOC_Os04g21700 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN778-S Chr4 12273504 14133482 0 0 Inversion 1859978 LOC_Os04g24610 expressed protein FN778-S Chr4 12309363 14133483 0 0 Inversion 1824120 LOC_Os04g21750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN778-S Chr4 12309363 14133483 0 0 Inversion 1824120 LOC_Os04g24610 expressed protein FN778-S Chr4 13573205 13573215 0 0 Deletion 10 LOC_Os04g23739 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN778-S Chr4 13573227 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g23739 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN778-S Chr4 13977688 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g24370 retrotransposon protein, putative, unclassified, expressed FN778-S Chr4 16387033 16387037 0 0 Deletion 4 FN778-S Chr4 17334294 17334296 0 0 Deletion 2 FN778-S Chr4 27742565 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN778-S Chr4 3026352 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g05880 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN778-S Chr4 33688783 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN778-S Chr4 33688784 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN778-S Chr4 5519135 A-T 0 0 Single Base Substitution 0 INTRON HET FN778-S Chr4 5519138 A-T 0 0 Single Base Substitution 0 INTRON HET FN778-S Chr4 7291290 7291290 0 0 Insertion 1 FN778-S Chr5 11402625 11402631 0 0 Deletion 6 FN778-S Chr5 12302216 G-A 0 0 Single Base Substitution 0 INTRON HET FN778-S Chr5 23596554 23596563 0 0 Deletion 9 FN778-S Chr5 29545083 29545089 0 0 Deletion 6 FN778-S Chr6 1493803 1493827 0 0 Deletion 24 FN778-S Chr6 17083918 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN778-S Chr6 21184356 21184372 0 0 Deletion 16 FN778-S Chr6 28049251 A-G 0 0 Single Base Substitution 0 INTRON HET FN778-S Chr7 11640255 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN778-S Chr7 1528106 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN778-S Chr7 18226425 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN778-S Chr7 20974135 20974136 0 0 Deletion 1 FN778-S Chr7 22670341 25462675 0 0 Inversion 2792334 FN778-S Chr7 23893139 Chr3 18885718 0 Translocation 0 LOC_Os03g33012 WRKY81, expressed FN778-S Chr7 23893149 Chr3 17781360 0 Translocation 0 LOC_Os03g31230 MYB family transcription factor, putative, expressed FN778-S Chr7 23951939 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN778-S Chr8 22016696 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN778-S Chr8 27294064 27294070 0 0 Deletion 6 FN778-S Chr8 27354742 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN778-S Chr8 5072041 5072042 0 0 Deletion 1 FN778-S Chr9 18595920 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN778-S Chr9 21237987 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN778-S Chr9 3236001 3285000 0 0 Deletion 49000 LOC_Os09g06770 RING finger protein, putative, expressed FN778-S Chr9 3236001 3285000 0 0 Deletion 49000 LOC_Os09g06780 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN778-S Chr9 3236001 3285000 0 0 Deletion 49000 LOC_Os09g06790 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN778-S Chr9 3236001 3285000 0 0 Deletion 49000 LOC_Os09g06800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN778-S Chr9 3236001 3285000 0 0 Deletion 49000 LOC_Os09g06810 retrotransposon protein, putative, Ty3-gypsy subclass FN778-S Chr9 3236001 3285000 0 0 Deletion 49000 LOC_Os09g06820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN778-S Chr9 3236001 3285000 0 0 Deletion 49000 LOC_Os09g06830 hypothetical protein FN778-S Chr9 3236001 3285000 0 0 Deletion 49000 LOC_Os09g06840 retrotransposon, putative, centromere-specific FN778-S Chr9 3236001 3285000 0 0 Deletion 49000 LOC_Os09g06850 retrotransposon protein, putative, Ty3-gypsy subclass FN778-S Chr9 3236054 4304093 0 0 Inversion 1068039 FN778-S Chr9 3287001 3328000 0 0 Deletion 41000 LOC_Os09g06860 retrotransposon protein, putative, unclassified FN778-S Chr9 3287001 3328000 0 0 Deletion 41000 LOC_Os09g06870 retrotransposon protein, putative, unclassified FN778-S Chr9 3287001 3328000 0 0 Deletion 41000 LOC_Os09g06880 retrotransposon protein, putative, unclassified FN778-S Chr9 3287001 3328000 0 0 Deletion 41000 LOC_Os09g06890 BTB/POZ domain containing protein, expressed FN778-S Chr9 3287001 3328000 0 0 Deletion 41000 LOC_Os09g06900 retrotransposon protein, putative, unclassified, expressed FN778-S Chr9 3287001 3328000 0 0 Deletion 41000 LOC_Os09g06910 retrotransposon protein, putative, unclassified, expressed FN778-S Chr9 4304140 5005690 0 0 Inversion 701550