FN784-S Chr1 17215965 18365777 0 0 Inversion 1149812 LOC_Os01g31470 mov34/MPN/PAD-1 family protein, expressed FN784-S Chr1 17215965 18365777 0 0 Inversion 1149812 LOC_Os01g33350 zinc-binding protein, putative, expressed FN784-S Chr1 17890413 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g32630 retrotransposon protein, putative, unclassified, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32780 universal stress protein domain containing protein, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32790 expressed protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32800 proteasome subunit, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32810 expressed protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32830 expressed protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32840 expressed protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32849 expressed protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32860 hypothetical protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32864 retrotransposon protein, putative, unclassified, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32870 heat shock protein DnaJ, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32880 AP-3 complex subunit delta, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32890 expressed protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32900 retrotransposon protein, putative, unclassified, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32910 hypothetical protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32920 ZOS1-08 - C2H2 zinc finger protein, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32930 SGS domain containing protein, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32940 hypothetical protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32950 hypothetical protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32964 protein phosphotase protein, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32980 mitochondrial carrier protein, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g32990 retrotransposon protein, putative, Ty1-copia subclass, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33000 expressed protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33020 trafficking protein particle complex subunit 1, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33030 Brix domain containing protein, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33040 kinesin motor domain containing protein, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33050 ribosomal protein L24, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33060 HEAT repeat family protein, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33070 pentatricopeptide repeat protein PPR868-14, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33080 fimbrin-like protein 2, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33090 expressed protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33100 retrotransposon protein, putative, Ty1-copia subclass, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33110 receptor-like protein kinase 5 precursor, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33120 retrotransposon, putative, centromere-specific, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33130 retrotransposon protein, putative, unclassified, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33136 retrotransposon protein, putative, unclassified, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33142 hypothetical protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33150 retrotransposon protein, putative, Ty3-gypsy subclass FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33160 stress responsive A/B Barrel domain containing protein, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33180 hypothetical protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33204 retrotransposon protein, putative, unclassified, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33220 retrotransposon protein, putative, unclassified, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33230 UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33240 transposon protein, putative, unclassified, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33250 retrotransposon protein, putative, Ty3-gypsy subclass FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33260 retrotransposon protein, putative, unclassified, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33270 hypothetical protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33290 hypothetical protein FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33300 polygalacturonase, putative, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33324 retrotransposon protein, putative, Ty1-copia subclass, expressed FN784-S Chr1 17992981 18366656 0 0 Deletion 373675 LOC_Os01g33350 zinc-binding protein, putative, expressed FN784-S Chr1 17993027 18405877 0 0 Inversion 412850 LOC_Os01g32780 universal stress protein domain containing protein, putative, expressed FN784-S Chr1 18366173 20295551 0 0 Inversion 1929378 LOC_Os01g33350 zinc-binding protein, putative, expressed FN784-S Chr1 23284789 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN784-S Chr1 23798371 23798371 0 0 Insertion 2 FN784-S Chr1 33797439 33797440 0 0 Deletion 1 FN784-S Chr1 8024395 8027270 0 0 Deletion 2875 LOC_Os01g14320 expressed protein FN784-S Chr1 8229334 8230865 0 0 Deletion 1531 LOC_Os01g14700 expressed protein FN784-S Chr10 13789674 13789674 0 0 Insertion 1 FN784-S Chr10 18706272 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN784-S Chr10 2083506 2083513 0 0 Deletion 7 FN784-S Chr10 6044991 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g10920 retrotransposon protein, putative, Ty3-gypsy subclass FN784-S Chr10 6845738 Chr6 22827530 0 Translocation 0 FN784-S Chr10 9006180 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os10g17800 retrotransposon protein, putative, unclassified, expressed FN784-S Chr11 16188216 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN784-S Chr11 17766277 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN784-S Chr12 15228768 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN784-S Chr12 23768261 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN784-S Chr2 24935516 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os02g41580 CAMK_CAMK_like.14 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN784-S Chr2 4709345 T-C 0 0 Single Base Substitution 0 INTRON HET FN784-S Chr3 3011316 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN784-S Chr4 14155898 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN784-S Chr4 26380002 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN784-S Chr4 34246778 G-T 0 0 Single Base Substitution 0 INTRON HET FN784-S Chr4 35497411 35497412 0 0 Deletion 1 FN784-S Chr4 7571041 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN784-S Chr4 9081809 G-C 0 0 Single Base Substitution 0 INTRON HOMO FN784-S Chr5 13383985 13383987 0 0 Deletion 2 FN784-S Chr5 21964446 21964448 0 0 Deletion 2 LOC_Os05g37520 expressed protein FN784-S Chr5 22679964 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN784-S Chr5 28594649 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN784-S Chr5 4082372 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN784-S Chr5 7299001 7347000 0 0 Deletion 48000 LOC_Os05g12710 expressed protein FN784-S Chr5 7299001 7347000 0 0 Deletion 48000 LOC_Os05g12720 conserved hypothetical protein FN784-S Chr5 7299001 7347000 0 0 Deletion 48000 LOC_Os05g12730 expressed protein FN784-S Chr5 7299001 7347000 0 0 Deletion 48000 LOC_Os05g12740 transposon protein, putative, unclassified, expressed FN784-S Chr5 7299001 7347000 0 0 Deletion 48000 LOC_Os05g12750 retrotransposon protein, putative, LINE subclass FN784-S Chr5 7299001 7347000 0 0 Deletion 48000 LOC_Os05g12760 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7299001 7347000 0 0 Deletion 48000 LOC_Os05g12770 NB-ARC domain containing protein, expressed FN784-S Chr5 7299001 7347000 0 0 Deletion 48000 LOC_Os05g12780 transposon protein, putative, unclassified, expressed FN784-S Chr5 7299001 7347000 0 0 Deletion 48000 LOC_Os05g12790 expressed protein FN784-S Chr5 7299001 7347000 0 0 Deletion 48000 LOC_Os05g12800 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13300 helicase, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13320 C4-dicarboxylate transporter/malic acid transport protein, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13330 per1-like family protein, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13340 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13350 hypothetical protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13360 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13370 OsRhmbd12 - Putative Rhomboid homologue, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13380 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13390 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13400 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13410 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13420 large tegument protein, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13430 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13440 coiled-coil domain-containing protein 25, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13450 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13460 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13470 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13480 S-adenosylmethionine decarboxylase proenzyme, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13490 BURP domain containing protein, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13500 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13510 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13520 white-brown complex homolog protein 12, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13530 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13540 hypothetical protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13550 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13560 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13570 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13580 OsCML18 - Calmodulin-related calcium sensor protein, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13590 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13600 retrotransposon protein, putative, Ty3-gypsy subclass FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13620 RNA recognition motif containing protein, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13630 RNA recognition motif containing protein, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13640 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13650 RNA recognition motif containing protein, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13660 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13670 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13680 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13690 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13700 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13710 retrotransposon protein, putative, unclassified FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13720 retrotransposon protein, putative, unclassified FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13730 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13740 retrotransposon protein, putative, unclassified FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13750 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13760 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13770 RNA polymerase Rpb7, N-terminal domain containing protein, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13780 C-5 cytosine-specific DNA methylase, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13790 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13800 transposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13804 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13810 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13820 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13830 TsetseEP precursor, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13840 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13850 TsetseEP precursor, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13860 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13870 hypothetical protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13880 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13890 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13900 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13904 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13910 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13920 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13930 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13940 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13950 eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13960 transposon protein, putative, Pong sub-class, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13970 phosphorylase domain containing protein, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13980 hypothetical protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g13990 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g14000 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g14010 ethylene-responsive protein related, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g14030 receptor kinase, putative, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g14034 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g14040 G-patch domain containing protein, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g14050 hypothetical protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g14060 retrotransposon protein, putative, unclassified, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g14070 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g14080 expressed protein FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g14090 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g14100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN784-S Chr5 7361001 7886000 0 0 Deletion 525000 LOC_Os05g14110 retrotransposon protein, putative, unclassified, expressed FN784-S Chr6 1039101 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN784-S Chr6 27388654 T-A 0 0 Single Base Substitution 0 INTRON HET FN784-S Chr7 19761902 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN784-S Chr7 7109135 7109137 0 0 Deletion 2 LOC_Os07g12470 expressed protein FN784-S Chr7 8528049 8528049 0 0 Insertion 1 FN784-S Chr9 20169632 20169632 0 0 Insertion 12 FN784-S Chr9 8510103 G-T 0 0 Single Base Substitution 0 INTERGENIC HET