FN824-S Chr1 28873275 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr1 29329288 29329295 0 0 Deletion 7 FN824-S Chr1 30413015 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN824-S Chr1 30432103 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr1 35988905 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr1 4084447 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20210 retrotransposon protein, putative, unclassified FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20220 retrotransposon protein, putative, unclassified, expressed FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20230 expressed protein FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20235 expressed protein FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20240 syntaxin 6, N-terminal domain containing protein, expressed FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20250 membrane associated DUF588 domain containing protein, putative, expressed FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20260 CSLF7 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20280 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20290 expressed protein FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20300 expressed protein FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20310 thioredoxin fold, putative, expressed FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20320 transposon protein, putative, CACTA, En/Spm sub-class FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20330 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20340 expressed protein FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20350 MATE efflux family protein, putative, expressed FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20370 expressed protein FN824-S Chr10 10147001 10243000 0 0 Deletion 96000 LOC_Os10g20380 uncharacterized transporter C11D3.06, putative, expressed FN824-S Chr10 12232031 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN824-S Chr10 12232041 12232044 0 0 Deletion 3 FN824-S Chr10 21482060 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN824-S Chr10 21822850 21822851 0 0 Deletion 1 LOC_Os10g40680 expressed protein FN824-S Chr10 2214095 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN824-S Chr10 22364416 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN824-S Chr11 11255454 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN824-S Chr11 11255455 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN824-S Chr11 19595026 19595026 0 0 Insertion 2 FN824-S Chr11 20091145 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN824-S Chr11 22130892 Chr6 15401669 0 Translocation 0 FN824-S Chr12 13637376 T-C 0 0 Single Base Substitution 0 INTRON HET FN824-S Chr12 19891320 19891341 0 0 Deletion 21 LOC_Os12g32920 plant protein of unknown function domain containing protein, expressed FN824-S Chr12 21632667 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr12 4965116 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr2 16513963 16513963 0 0 Insertion 2 FN824-S Chr2 20247760 20247772 0 0 Deletion 12 FN824-S Chr2 23175841 23175848 0 0 Deletion 7 FN824-S Chr2 24408001 24432000 0 0 Deletion 24000 LOC_Os02g40320 PINHEAD, putative, expressed FN824-S Chr2 24408001 24432000 0 0 Deletion 24000 LOC_Os02g40330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN824-S Chr3 15412410 15412424 0 0 Deletion 14 FN824-S Chr3 22738683 22738684 0 0 Deletion 1 FN824-S Chr3 35471916 A-C 0 0 Single Base Substitution 0 INTRON HET FN824-S Chr3 5219487 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g10250 expressed protein FN824-S Chr3 6136467 G-T 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN824-S Chr4 10350048 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr4 12644507 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr4 28603109 28603110 0 0 Deletion 1 LOC_Os04g48070 homeobox and START domains containing protein, putative, expressed FN824-S Chr4 31665116 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN824-S Chr4 3167159 3167159 0 0 Insertion 2 FN824-S Chr4 31853709 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr4 33403612 33403613 0 0 Deletion 1 FN824-S Chr4 35114636 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01650 erythronate-4-phosphate dehydrogenase domain containing protein, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01660 erythronate-4-phosphate dehydrogenase domain containing protein, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01674 erythronate-4-phosphate dehydrogenase domain containing protein, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01690 pyridoxal-dependent decarboxylase protein, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01710 cysteine proteinase At4g11310 precursor, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01720 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01730 hypothetical protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01740 heat shock protein, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01750 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01760 retrotransposon protein, putative, unclassified, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01770 retrotransposon protein, putative, unclassified, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01780 uncharacterized ACR, COG1399 family protein, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01800 hypothetical protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01810 terpene synthase, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01820 transposon protein, putative, CACTA, En/Spm sub-class FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01830 latency associated nuclear antigen, putative FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01840 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01850 hypothetical protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01860 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01874 protein kinase, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01890 protein kinase, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01900 transposon protein, putative, unclassified, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01910 legume lectins beta domain containing protein, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01920 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01930 exostosin family protein, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01940 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01950 legume lectins beta domain containing protein, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01960 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01970 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01980 receptor protein kinase, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g01990 pentatricopeptide domain containing protein, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02000 zinc finger family protein, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02010 hypothetical protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02020 hypothetical protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02030 rp1, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02040 NBS-LRR, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02050 bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02060 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02070 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02080 retrotransposon protein, putative, unclassified FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02090 retrotransposon protein, putative, unclassified, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02100 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02110 disease resistance protein RGA3, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02120 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02130 retrotransposon protein, putative, unclassified, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02140 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02150 tRNA methyltransferase, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02160 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02180 retrotransposon, putative, centromere-specific, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02200 retrotransposon protein, putative, unclassified, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02210 retrotransposon protein, putative, Ty3-gypsy subclass FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02220 retrotransposon protein, putative, Ty3-gypsy subclass FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02230 retrotransposon, putative, centromere-specific, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02264 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02280 OsFBX114 - F-box domain containing protein, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02300 retrotransposon protein, putative, unclassified, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02310 retrotransposon protein, putative, Ty1-copia subclass, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02320 retrotransposon protein, putative, Ty1-copia subclass FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02330 retrotransposon protein, putative, Ty1-copia subclass, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02340 retrotransposon protein, putative, unclassified FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02350 transposon protein, putative, unclassified, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02354 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02360 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02370 transposon protein, putative, unclassified, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02375 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02380 hypothetical protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02390 transposon protein, putative, CACTA, En/Spm sub-class FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02400 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02410 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02420 transposon protein, putative, unclassified, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02434 transposon protein, putative, unclassified, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02450 rust-resistance protein Lr21, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02460 retrotransposon protein, putative, unclassified, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02470 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02480 NBS-LRR, putative FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02490 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02500 G-patch domain containing protein, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02510 ZOS4-01 - C2H2 zinc finger protein, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02520 Leucine Rich Repeat family protein, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02530 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02550 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02560 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02570 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02580 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02590 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02600 retrotransposon protein, putative, LINE subclass, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02610 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02620 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02630 retrotransposon protein, putative, unclassified FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02640 3-ketoacyl-CoA synthase 6, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02650 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02660 retrotransposon protein, putative, unclassified FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02670 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02680 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02690 pattern formation protein EMB30, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02700 retrotransposon protein, putative, unclassified, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02710 retrotransposon protein, putative, unclassified, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02720 potassium channel KAT2, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02730 tRNA-dihydrouridine synthase 3-like, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02754 amidase family protein, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02780 amidase family protein, putative, expressed FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02790 expressed protein FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02800 retrotransposon protein, putative, Ty3-gypsy subclass FN824-S Chr4 441701 1092919 0 0 Deletion 651218 LOC_Os04g02810 retrotransposon protein, putative, unclassified, expressed FN824-S Chr5 14329649 T-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN824-S Chr5 22342401 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN824-S Chr6 1112753 1112753 0 0 Tandem-Duplication 0 LOC_Os06g03030 expressed protein FN824-S Chr6 1112922 1113270 0 0 Inversion 348 LOC_Os06g03030 expressed protein FN824-S Chr6 11627639 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr6 12410621 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr6 12410622 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr6 12825127 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr6 13335360 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr6 19575026 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr6 1959279 8363088 0 0 Inversion 6403809 FN824-S Chr6 23820026 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr6 9493482 9493494 0 0 Deletion 12 LOC_Os06g16550 hypothetical protein FN824-S Chr7 6686829 6686839 0 0 Deletion 10 FN824-S Chr8 10867964 10867966 0 0 Deletion 2 FN824-S Chr8 18870909 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr8 18987167 18987178 0 0 Deletion 11 FN824-S Chr8 20747103 20747110 0 0 Deletion 7 FN824-S Chr8 4530503 C-A 0 0 Single Base Substitution 0 INTRON HET FN824-S Chr8 9879762 9879762 0 0 Insertion 2 FN824-S Chr9 10038025 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr9 10403603 10403603 0 0 Insertion 2 FN824-S Chr9 16905094 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN824-S Chr9 4038041 4038041 0 0 Insertion 1 LOC_Os09g07910 DNA-directed RNA polymerase subunit alpha, putative, expressed FN824-S Chr9 4916904 Chr1 13054397 0 Translocation 0