FN873-S Chr1 20171111 20171112 0 0 Deletion 1 FN873-S Chr1 21118460 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr1 22419533 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr1 23332079 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN873-S Chr1 29394558 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr1 34489528 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN873-S Chr1 5006986 5007009 0 0 Deletion 23 FN873-S Chr1 5276866 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN873-S Chr10 15468601 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN873-S Chr10 19170052 19170058 0 0 Deletion 6 FN873-S Chr10 19626284 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr11 18883851 18883867 0 0 Deletion 16 FN873-S Chr11 20044402 20092739 0 0 Inversion 48337 LOC_Os11g34290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN873-S Chr11 20092962 Chr10 244583 0 Translocation 0 LOC_Os11g34290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN873-S Chr11 20092976 20459846 0 0 Inversion 366870 LOC_Os11g34290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN873-S Chr11 20092976 20459846 0 0 Inversion 366870 LOC_Os11g34910 expressed protein FN873-S Chr11 20130562 T-G 0 0 Single Base Substitution 0 INTRON HOMO FN873-S Chr11 20441889 20441891 0 0 Deletion 2 FN873-S Chr11 22840117 22840117 0 0 Insertion 2 FN873-S Chr11 22910820 22910821 0 0 Deletion 1 LOC_Os11g38640 expressed protein FN873-S Chr11 7029982 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr12 20898452 C-T 0 0 Single Base Substitution 0 INTRON HET FN873-S Chr12 22601203 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN873-S Chr12 8142504 8142505 0 0 Deletion 1 FN873-S Chr2 13141550 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN873-S Chr2 2307168 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr2 25688383 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN873-S Chr2 26304188 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN873-S Chr2 35465671 35465674 0 0 Deletion 3 FN873-S Chr2 4814456 4814458 0 0 Deletion 2 FN873-S Chr3 10902805 Chr1 34373527 0 Translocation 0 FN873-S Chr3 21723529 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr3 25511321 25511321 0 0 Insertion 2 FN873-S Chr3 495993 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr3 8163030 8163030 0 0 Insertion 3 FN873-S Chr3 8413121 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr4 23624265 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr4 25918814 25918815 0 0 Deletion 1 FN873-S Chr4 25966072 25966077 0 0 Deletion 5 FN873-S Chr4 28053997 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g47240 STE_MEKK_ste11_MAP3K.17 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed FN873-S Chr4 31033662 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr4 31095519 31597192 0 0 Inversion 501673 LOC_Os04g53040 retrotransposon protein, putative, unclassified, expressed FN873-S Chr5 25409573 25409575 0 0 Deletion 2 FN873-S Chr5 29287891 29287891 0 0 Insertion 2 FN873-S Chr5 4778545 4778545 0 0 Insertion 1 FN873-S Chr6 11382936 11382945 0 0 Deletion 9 LOC_Os06g19900 retrotransposon protein, putative, unclassified, expressed FN873-S Chr6 21557849 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr6 22242993 22243002 0 0 Deletion 9 FN873-S Chr6 2965101 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20230 retrotransposon protein, putative, unclassified, expressed FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20240 transposon protein, putative, unclassified, expressed FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20250 retrotransposon protein, putative, unclassified, expressed FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20260 expressed protein FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20270 expressed protein FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20280 retrotransposon protein, putative, Ty1-copia subclass, expressed FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20290 expressed protein FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20300 retrotransposon protein, putative, unclassified, expressed FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20310 expressed protein FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20340 heavy metal-associated domain containing protein, expressed FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20360 retrotransposon protein, putative, unclassified, expressed FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20370 retrotransposon, putative, centromere-specific, expressed FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20380 retrotransposon, putative, centromere-specific FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20390 retrotransposon, putative, centromere-specific FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20400 retrotransposon, putative, centromere-specific, expressed FN873-S Chr7 11667001 11787000 0 0 Deletion 120000 LOC_Os07g20410 expressed protein FN873-S Chr7 13347913 13347936 0 0 Deletion 23 LOC_Os07g23610 transposon protein, putative, CACTA, En/Spm sub-class FN873-S Chr7 13900523 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g24410 retrotransposon protein, putative, unclassified FN873-S Chr7 15547163 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr7 15958468 15958469 0 0 Deletion 1 FN873-S Chr7 18419110 18419112 0 0 Deletion 2 LOC_Os07g31130 OsWAK72 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed FN873-S Chr7 19044128 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr7 19156138 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr7 21510275 21510282 0 0 Deletion 7 LOC_Os07g35950 expressed protein FN873-S Chr7 22971676 A-T 0 0 Single Base Substitution 0 INTRON HET FN873-S Chr7 23509062 23509063 0 0 Deletion 1 LOC_Os07g39270 polyprenyl synthetase, putative, expressed FN873-S Chr7 23995263 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr7 6121432 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g11070 DUF630/DUF632 domains containing protein, putative, expressed FN873-S Chr7 8404042 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr8 2615921 2615921 0 0 Insertion 2 FN873-S Chr8 5812368 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g10030 KH domain-containing protein, putative, expressed FN873-S Chr8 7228530 7228543 0 0 Deletion 13 LOC_Os08g12280 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN873-S Chr8 8807498 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN873-S Chr9 16139103 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr9 1957333 1957339 0 0 Deletion 6 LOC_Os09g03860 retrotransposon protein, putative, unclassified, expressed FN873-S Chr9 1957343 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN873-S Chr9 2279495 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN873-S Chr9 2600000 2600001 0 0 Deletion 1 LOC_Os09g04880 expressed protein FN873-S Chr9 4349164 4349165 0 0 Deletion 1