FN888-S Chr1 13617246 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr1 23181492 23181499 0 0 Deletion 7 FN888-S Chr1 23966817 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr1 25369840 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN888-S Chr1 30158156 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN888-S Chr1 34392738 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN888-S Chr1 35933576 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr10 11115536 Chr3 29243983 0 Translocation 0 FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37759 stripe rust resistance protein Yr10, putative, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37770 retrotransposon protein, putative, unclassified FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37774 stripe rust resistance protein Yr10, putative, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37780 stripe rust resistance protein Yr10, putative, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37790 mla, putative, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37800 mla1, putative, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37810 expressed protein FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37820 retrotransposon protein, putative, unclassified, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37830 retrotransposon protein, putative, unclassified, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37840 expressed protein FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37850 stripe rust resistance protein Yr10, putative, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37860 stripe rust resistance protein Yr10, putative, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37870 stripe rust resistance protein Yr10, putative, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37880 stripe rust resistance protein Yr10, putative, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37890 NAD dependent epimerase/dehydratase family protein, putative, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37900 3-ketoacyl-CoA synthase, putative, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37910 expressed protein FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37920 DJ-1 family protein, putative, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37930 WIP1 - Wound-induced protein precursor, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37940 WIP2 - Wound-induced protein precursor, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37944 expressed protein FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37950 WIP3 - Wound-induced protein precursor, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37960 WIP4 - Wound-induced protein precursor, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37970 WIP5 - Wound-induced protein precursor, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37980 GAUT2/LGT2, putative, expressed FN888-S Chr11 22331001 22525000 0 0 Deletion 194000 LOC_Os11g37990 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38000 NB-ARC domain containing protein, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38010 targeting protein for Xklp2, putative, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38020 GTPase of unknown function domain containing protein, putative, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38030 CDK5RAP1, putative, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38040 expressed protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38050 phosphoesterase family protein, putative, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38070 expressed protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38080 retrotransposon protein, putative, unclassified FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38090 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38100 OsFBDUF55 - F-box and DUF domain containing protein, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38110 retrotransposon protein, putative, Ty3-gypsy subclass FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38120 OsFBDUF56 - F-box and DUF domain containing protein, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38130 OsFBDUF57 - F-box and DUF domain containing protein, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38140 OsFBDUF58 - F-box and DUF domain containing protein, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38150 expressed protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38160 transporter family protein, putative, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38170 notchless protein, putative, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38180 OsFBDUF59 - F-box and DUF domain containing protein, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38190 expressed protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38200 OsFBDUF60 - F-box and DUF domain containing protein, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38210 DUF538 domain containing protein, putative, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38220 DUF538 domain containing protein, putative, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38230 OsFBDUF61 - F-box and DUF domain containing protein, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38240 DUF538 domain containing protein, putative, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38250 expressed protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38260 PAP fibrillin family domain containing protein, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38270 hypothetical protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38280 expressed protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38300 retrotransposon protein, putative, unclassified, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38310 expressed protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38320 transposon protein, putative, unclassified FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38330 ZOS11-06 - C2H2 zinc finger protein, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38340 expressed protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38350 retrotransposon protein, putative, unclassified, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38360 retrotransposon protein, putative, unclassified, expressed FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38370 hypothetical protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38380 expressed protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38390 expressed protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38400 hypothetical protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38410 expressed protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38420 transposon protein, putative, unclassified FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38430 expressed protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38440 expressed protein FN888-S Chr11 22530001 22777000 0 0 Deletion 247000 LOC_Os11g38450 expressed protein FN888-S Chr12 11261981 11261982 0 0 Deletion 1 FN888-S Chr12 17039006 17039007 0 0 Deletion 1 FN888-S Chr12 20268919 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN888-S Chr12 21716418 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16690 zinc finger, C3HC4 type domain containing protein, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16710 retrotransposon protein, putative, Ty1-copia subclass, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16720 cytochrome P450 71A1, putative, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16730 retrotransposon protein, putative, Ty1-copia subclass, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16740 retrotransposon protein, putative, Ty1-copia subclass, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16750 retrotransposon protein, putative, unclassified, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16760 expressed protein FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16770 expressed protein FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16780 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16790 transposon protein, putative, CACTA, En/Spm sub-class FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16820 retrotransposon protein, putative, unclassified, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16860 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16870 expressed protein FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16880 PROLM27 - Prolamin precursor, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16890 PROLM28 - Prolamin precursor, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16930 retrotransposon protein, putative, Ty3-gypsy subclass FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16950 retrotransposon protein, putative, unclassified, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16960 retrotransposon protein, putative, unclassified, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16970 retrotransposon protein, putative, unclassified, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16980 retrotransposon protein, putative, unclassified FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g16990 expressed protein FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g17000 retrotransposon protein, putative, unclassified FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g17010 PROLM29 - Prolamin precursor, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g17020 expressed protein FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g17030 PROLM30 - Prolamin precursor, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g17040 retrotransposon protein, putative, unclassified FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g17050 retrotransposon protein, putative, unclassified, expressed FN888-S Chr12 9559001 9765000 0 0 Deletion 206000 LOC_Os12g17060 retrotransposon protein, putative, unclassified, expressed FN888-S Chr12 9559203 9663380 0 0 Inversion 104177 LOC_Os12g16850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN888-S Chr2 1926 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr2 2182042 C-T 0 0 Single Base Substitution 0 INTRON HET FN888-S Chr2 25438330 25446863 0 0 Deletion 8533 LOC_Os02g42300 expressed protein FN888-S Chr2 25438330 25446863 0 0 Deletion 8533 LOC_Os02g42310 OsSCP8 - Putative Serine Carboxypeptidase homologue, expressed FN888-S Chr2 25438367 Chr1 20774774 0 Translocation 0 LOC_Os02g42300 expressed protein FN888-S Chr2 25446831 Chr1 20774798 0 Translocation 0 LOC_Os02g42310 OsSCP8 - Putative Serine Carboxypeptidase homologue, expressed FN888-S Chr2 29681308 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr2 4338480 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr2 8047619 C-T 0 0 Single Base Substitution 0 INTRON HET FN888-S Chr3 14312802 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr3 15080629 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN888-S Chr3 285140 710134 0 0 Inversion 424994 LOC_Os03g01390 transposon protein, putative, unclassified, expressed FN888-S Chr3 285151 710141 0 0 Inversion 424990 LOC_Os03g01390 transposon protein, putative, unclassified, expressed FN888-S Chr4 12856595 12856601 0 0 Deletion 6 FN888-S Chr4 18709100 18709121 0 0 Deletion 21 FN888-S Chr4 20049954 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g33120 retrotransposon protein, putative, unclassified, expressed FN888-S Chr4 29821272 C-A 0 0 Single Base Substitution 0 INTRON HET FN888-S Chr4 32913828 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr4 4394297 4890945 0 0 Inversion 496648 FN888-S Chr4 4396605 4890953 0 0 Inversion 494348 FN888-S Chr5 14272976 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr5 21491621 Chr4 4503560 0 Translocation 0 LOC_Os04g08400 retrotransposon protein, putative, unclassified, expressed FN888-S Chr5 21491621 Chr4 4506437 0 Translocation 0 FN888-S Chr5 6475272 T-C 0 0 Single Base Substitution 0 INTRON HET FN888-S Chr5 6475279 6475280 0 0 Deletion 1 FN888-S Chr5 6930604 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr5 768277 1422917 0 0 Inversion 654640 LOC_Os05g03420 expressed protein FN888-S Chr5 768289 1422918 0 0 Inversion 654629 LOC_Os05g03420 expressed protein FN888-S Chr6 12398707 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr6 15888336 15888348 0 0 Deletion 12 FN888-S Chr6 26060753 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN888-S Chr6 26063306 26063311 0 0 Deletion 5 FN888-S Chr6 5221447 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr6 5557186 5557187 0 0 Deletion 1 FN888-S Chr6 7263846 7263866 0 0 Deletion 20 LOC_Os06g13220 expressed protein FN888-S Chr7 12641224 12643134 0 0 Deletion 1910 LOC_Os07g22480 retrotransposon, putative, centromere-specific, expressed FN888-S Chr7 15220279 15220280 0 0 Deletion 1 FN888-S Chr7 19224138 T-C 0 0 Single Base Substitution 0 INTRON HET FN888-S Chr7 24415296 24670743 0 0 Inversion 255447 LOC_Os07g40730 SNF2 domain-containing protein, putative, expressed FN888-S Chr7 26750819 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr7 6012444 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr8 14760282 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr8 14760286 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN888-S Chr8 25751145 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr8 25824153 25824153 0 0 Insertion 2 FN888-S Chr9 14889169 14889170 0 0 Deletion 1 FN888-S Chr9 18761587 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN888-S Chr9 3690087 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN888-S Chr9 4763486 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g08960 retrotransposon protein, putative, unclassified, expressed FN888-S Chr9 5950040 6390299 0 0 Inversion 440259 FN888-S Chr9 5950056 6390297 0 0 Inversion 440241 FN888-S Chr9 8298038 C-T 0 0 Single Base Substitution 0 INTERGENIC HET